BAC Information

Click to search

BAC

Clone NameB6Ng01-207J12
Chromosome7 (Build37)
Map Location 119,080,647 - 119,205,477
singlet/doubletdoublet
Overlap geneLOC668399, LOC100042678, Usp47
Upstream geneMrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4
Downstream geneDkk3, Mical2, Micalcl, Parva, LOC627808, Tead1, 4632411J06Rik, LOC434227
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-207J12.bB6Ng01-207J12.g
ACCGA026698GA026699
length1,177877
definitionB6Ng01-207J12.b B6Ng01-207J12.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(119,204,299 - 119,205,477)(119,080,647 - 119,081,510)
sequence
gaattcttaaggtgttaaacatatttaacaaaacaaaatgcaaaccccca
aacattaagaatactattaatggtttcctgtctaaaactggcaatgctaa
gatcactccactactcgaggctaactattaagtttcctactttcctgttt
acaaatggttttgctttgactccgtccctctgtcaagtgttcactgtttc
ttatattaggactgagaggttgcacctgtatggctctgcccccttttacc
catgggcaaacccttcagactctgactcacttttcttctctgagaccaca
tgtgctttaccttcctctatactcagccactagctctcctgttagttatc
cttatggaaggttttagaattgaaattataggatctcaaaattccattac
aaccttaaaaggttatacattttgctgggacttgcaatttcataagttat
atagtcagacactttgttgacacattcaattcttcccattcttttactac
taaaaaggttgccagagtgtcatctcaggttttcactcagaaataccagt
actacccacaactgccactctgaccccatgcatcccagctcagcttaatc
acagaccctcaaaaggacttctttcaaatcattctttgacctgcattaca
taagcttcctaataattcacagactgtatcacaagccttcaagtcaacag
tgaagcgtctatgtgggccacatacaaaggatgaatgtgcaacttcatct
ttcactgtggtgctgctcctgtgcagtccagtgagggccctaggtttatc
tacactctgatatcacactgctgtaaacttctatctaaaacctcaatgtc
aaaagtccacctcattgaatctgtgttttaacccttatccccactacagt
gggttttcaatggccctcaaacacttctctacttacagttcttgggtttc
cctttgaaggctgctctcatgggctgtttcccttcctcacttctctaaag
cctattgaccctttctcaacatttcttcagagttactctcttctacttgc
tttattatctccctgcatatacttggcctgttaaatgaactattttatat
aggttctcctatgaaagctctagggtaatccaggtcttatacgcgtaact
ctgtgtcgatgatctcatggtaatgca
gaattcctcctccccagctctctgccactgctcccacccccaactccttc
catgttatttaagggatttgctttcctgaacattctctccaggttttttt
tttcctgaaaaaaaaaaatgaaagcactttgcatttaaagcaaagaaaaa
gtactgtggatctaactgagttccctgtctaattaagtacctgggactcg
ggctccctctggcttcttaaatgtgcccagagatggcagtccatcaccct
gaggtgactcagctggttctcaggctgtgggagacattgtttgcttgtgt
gtgtgtgtttgtgtgtgtgtttacgtgtgttcatatatgtttgtgtacat
atgtgtgtgcatgtggaggccagaggtcaaccttgggtaccatttctcag
gagccatcttcttgttttctgaaacaggatctcttactgtcttggatctc
agagaggctggccagcctactccagaaaccatccctgtctgcctccctag
ttttgtacctgtaccaacacacatgccttgggaagtgcaggttctagtga
ttgaactcagacccccagctcccaggctgtcgttttctaacacatctgag
aaactggaaaaatgtgctgccaagagacgcctctgactgagtgctaacgg
ctgtccagagctttagatgtgtagaacttatatactctgttcttcttttg
aaccattttaacatctttaggaaatgtatttttctttacttacaaataaa
aaatggaaggctcagtgaaggcaaggattctggcagggtcagaactcatg
gaagaatcttcagcttatccctcctgaattagctatactaggtattctac
ttgctcatgaaaggtcacttagtattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_119204299_119205477
seq2: B6Ng01-207J12.b_44_1220 (reverse)

seq1  TGCATTACCATGAGTTCTATCTGACACAGAGTTCACGGCGTTAATAAGAC  50
      |||||||||||||| || ||| ||||||||||| || ||||  |||||||
seq2  TGCATTACCATGAGATC-ATC-GACACAGAGTT-AC-GCGT--ATAAGAC  44

seq1  TTGAATTCCCCCTTAAGAGCTTCCATA-GAGAACCTATATAAATAAGTTC  99
       || ||| |||    ||||||| |||| |||||||||||||||  |||||
seq2  CTGGATTACCC---TAGAGCTTTCATAGGAGAACCTATATAAAATAGTTC  91

seq1  ATTTTACAAGCCCAGTATGCCAAGGGAGATAATAAAGCAAAGTAG-AGAG  148
      |||| ||| ||| |||||    |||||||||||||||| |||||| ||||
seq2  ATTTAACAGGCCAAGTATATGCAGGGAGATAATAAAGC-AAGTAGAAGAG  140

seq1  AGTAACTTCTGGAGGAAATGTTGAG-AAGGGTC-ATA-GCTTTAGAG-AG  194
      |||||| ||| || ||||||||||| ||||||| ||| ||||||||| ||
seq2  AGTAAC-TCT-GAAGAAATGTTGAGAAAGGGTCAATAGGCTTTAGAGAAG  188

seq1  TGAGGAAGGGAAACAG-CCATGAGAGCAGCCTTCAA--GGGAACCCAAGA  241
      |||||||||||||||| |||||||||||||||||||  || |||||||||
seq2  TGAGGAAGGGAAACAGCCCATGAGAGCAGCCTTCAAAGGGAAACCCAAGA  238

seq1  ACTGTAAGTAGAGAAGTGTTTGAGGGCCATTG-AAACCCACTGTAGTGGG  290
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  ACTGTAAGTAGAGAAGTGTTTGAGGGCCATTGAAAACCCACTGTAGTGGG  288

seq1  GATAAGGGTTAAAACACAGATTCAATGAGGTGGACTTTTGACATTGAGGT  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAGGGTTAAAACACAGATTCAATGAGGTGGACTTTTGACATTGAGGT  338

seq1  TTTAGATAGAAGTTTACAGCAGTGTGATATCAGAGTGTAGATAAACCTAG  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGATAGAAGTTTACAGCAGTGTGATATCAGAGTGTAGATAAACCTAG  388

seq1  GGCCCTCACTGGACTGCACAGGAGCAGCACCACAGTGAAAGATGAAGTTG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCTCACTGGACTGCACAGGAGCAGCACCACAGTGAAAGATGAAGTTG  438

seq1  CACATTCATCCTTTGTATGTGGCCCACATAGACGCTTCACTGTTGACTTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTCATCCTTTGTATGTGGCCCACATAGACGCTTCACTGTTGACTTG  488

seq1  AAGGCTTGTGATACAGTCTGTGAATTATTAGGAAGCTTATGTAATGCAGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTTGTGATACAGTCTGTGAATTATTAGGAAGCTTATGTAATGCAGG  538

seq1  TCAAAGAATGATTTGAAAGAAGTCCTTTTGAGGGTCTGTGATTAAGCTGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAGAATGATTTGAAAGAAGTCCTTTTGAGGGTCTGTGATTAAGCTGA  588

seq1  GCTGGGATGCATGGGGTCAGAGTGGCAGTTGTGGGTAGTACTGGTATTTC  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATGCATGGGGTCAGAGTGGCAGTTGTGGGTAGTACTGGTATTTC  638

seq1  TGAGTGAAAACCTGAGATGACACTCTGGCAACCTTTTTAGTAGTAAAAGA  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTGAAAACCTGAGATGACACTCTGGCAACCTTTTTAGTAGTAAAAGA  688

seq1  ATGGGAAGAATTGAATGTGTCAACAAAGTGTCTGACTATATAACTTATGA  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGAAGAATTGAATGTGTCAACAAAGTGTCTGACTATATAACTTATGA  738

seq1  AATTGCAAGTCCCAGCAAAATGTATAACCTTTTAAGGTTGTAATGGAATT  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCAAGTCCCAGCAAAATGTATAACCTTTTAAGGTTGTAATGGAATT  788

seq1  TTGAGATCCTATAATTTCAATTCTAAAACCTTCCATAAGGATAACTAACA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATCCTATAATTTCAATTCTAAAACCTTCCATAAGGATAACTAACA  838

seq1  GGAGAGCTAGTGGCTGAGTATAGAGGAAGGTAAAGCACATGTGGTCTCAG  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGCTAGTGGCTGAGTATAGAGGAAGGTAAAGCACATGTGGTCTCAG  888

seq1  AGAAGAAAAGTGAGTCAGAGTCTGAAGGGTTTGCCCATGGGTAAAAGGGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAAGTGAGTCAGAGTCTGAAGGGTTTGCCCATGGGTAAAAGGGG  938

seq1  GCAGAGCCATACAGGTGCAACCTCTCAGTCCTAATATAAGAAACAGTGAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGCCATACAGGTGCAACCTCTCAGTCCTAATATAAGAAACAGTGAA  988

seq1  CACTTGACAGAGGGACGGAGTCAAAGCAAAACCATTTGTAAACAGGAAAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTGACAGAGGGACGGAGTCAAAGCAAAACCATTTGTAAACAGGAAAG  1038

seq1  TAGGAAACTTAATAGTTAGCCTCGAGTAGTGGAGTGATCTTAGCATTGCC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAAACTTAATAGTTAGCCTCGAGTAGTGGAGTGATCTTAGCATTGCC  1088

seq1  AGTTTTAGACAGGAAACCATTAATAGTATTCTTAATGTTTGGGGGTTTGC  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAGACAGGAAACCATTAATAGTATTCTTAATGTTTGGGGGTTTGC  1138

seq1  ATTTTGTTTTGTTAAATATGTTTAACACCTTAAGAATTC  1179
      |||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGTTTTGTTAAATATGTTTAACACCTTAAGAATTC  1177

seq1: chr7_119080647_119081510
seq2: B6Ng01-207J12.g_69_942

seq1  GAATTCCTCCTCCCCAGCTCTCTGCCACTGCTCCCACCCCCAACTCCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCCTCCCCAGCTCTCTGCCACTGCTCCCACCCCCAACTCCTTC  50

seq1  CATGTTATTTAAGGGATTTGCTTTCCTGAACATTCTCTCCAGGTTTTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTATTTAAGGGATTTGCTTTCCTGAACATTCTCTCCAGGTTTTTTT  100

seq1  TTTCCTGAAAAAAAAAAATGAAAGCACTTTGCATTTAAAGCAAAGAAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGAAAAAAAAAAATGAAAGCACTTTGCATTTAAAGCAAAGAAAAA  150

seq1  GTACTGTGGATCTAACTGAGTTCCCTGTCTAATTAAGTACCTGGGACTCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGTGGATCTAACTGAGTTCCCTGTCTAATTAAGTACCTGGGACTCG  200

seq1  GGCTCCCTCTGGCTTCTTAAATGTGCCCAGAGATGGCAGTCCATCACCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCCCTCTGGCTTCTTAAATGTGCCCAGAGATGGCAGTCCATCACCCT  250

seq1  GAGGTGACTCAGCTGGTTCTCAGGCTGTGGGAGACATTGTTTGCTTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGACTCAGCTGGTTCTCAGGCTGTGGGAGACATTGTTTGCTTGTGT  300

seq1  GTGTGTGTTTGTGTGTGTGTTTACGTGTGTTCATATATGTTTGTGTACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTTTGTGTGTGTGTTTACGTGTGTTCATATATGTTTGTGTACAT  350

seq1  ATGTGTGTGCATGTGGAGGCCAGAGGTCAACCTTGGGTACCATTTCTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGTGCATGTGGAGGCCAGAGGTCAACCTTGGGTACCATTTCTCAG  400

seq1  GAGCCATCTTCTTGTTTTCTGAAACAGGATCTCTTACTGTCTTGGATCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATCTTCTTGTTTTCTGAAACAGGATCTCTTACTGTCTTGGATCTC  450

seq1  AGAGAGGCTGGCCAGCCTACTCCAGAAACCATCCCTGTCTGCCTCCCTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGGCTGGCCAGCCTACTCCAGAAACCATCCCTGTCTGCCTCCCTAG  500

seq1  TTTTGTACCTGTACCAACACACATGCCTTGGGAAGTGCAGGTTCTAGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTACCTGTACCAACACACATGCCTTGGGAAGTGCAGGTTCTAGTGA  550

seq1  TTGAACTCAGACCCCCAGCTCCCAGGCTGTCGTTTTCTAACACATCTGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAACTCAGACCCCCAGCTCCCAGGCTGTCGTTTTCTAACACATCTGAG  600

seq1  AAACTGGAAAAATGTGCTGCCAAGAGACGCCTCTGACTGAGTGCTAACGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGGAAAAATGTGCTGCCAAGAGACGCCTCTGACTGAGTGCTAACGG  650

seq1  CTGTCCAGAGCTTTAGATGTGTAGAACTTATATACTCTGTTCTTCTTTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCAGAGCTTTAGATGTGTAGAACTTATATACTCTGTTCTTCTTTTG  700

seq1  AACCATTTTAACATC-TTAGGAAATGTATTTTTCTTACTTTACAAATAAA  749
      ||||||||||||||| ||||||||||||||||||||   |||||||||||
seq2  AACCATTTTAACATCTTTAGGAAATGTATTTTTCTTTACTTACAAATAAA  750

seq1  AAAT-GAAGGCTCAGTGAAGGCAAGGATTCTGCCAGGGTCAGAACTTCAT  798
      |||| ||||||||||||||||||||||||||| |||||||||||| ||||
seq2  AAATGGAAGGCTCAGTGAAGGCAAGGATTCTGGCAGGGTCAGAAC-TCAT  799

seq1  GG-AGAATC-TCAGCTTAT-CCTCCTGAA-TAGCTATACTAGG-ATTCTA  843
      || |||||| ||||||||| ||||||||| ||||||||||||| ||||||
seq2  GGAAGAATCTTCAGCTTATCCCTCCTGAATTAGCTATACTAGGTATTCTA  849

seq1  C-TGC-CAAG-AAGGTCAC-TAGTA  864
      | ||| || | |||||||| |||||
seq2  CTTGCTCATGAAAGGTCACTTAGTA  874