BAC Information

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BAC

Clone NameB6Ng01-214J05
Chromosome7 (Build37)
Map Location 22,872,313 - 23,066,113
singlet/doubletdoublet
Overlap geneEG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094, LOC100043625
Upstream geneLOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736
Downstream geneLOC100043626, LOC100043043, LOC100043048, LOC100043632, EG667485, V1rd14, LOC100043051, LOC100043058, EG435947, EG667504, EG667512, LOC100043061, LOC100043638, LOC667527, EG667530, LOC667536, EG667543, LOC100043645, EG667551, LOC100043650, LOC100043067, LOC100043069, LOC670857, LOC620758, EG667570, LOC100043658, LOC100043079, LOC100043083, EG667586, EG667599, LOC100043086, LOC100043665, LOC667616, LOC100043667, LOC667623, LOC100043088, EG628664
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214J05.bB6Ng01-214J05.g
ACCGA031789GA031790
length1,1281,189
definitionB6Ng01-214J05.b B6Ng01-214J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,064,988 - 23,066,113)(22,872,313 - 22,873,502)
sequence
gaattcctaaaattatatcagtgatcattaagctcttttacagtgggact
gccattaggtctttttcttgaacttgaacagtagtaaaattacagctatt
aagtagcaacgaaaaaaaaatctgatggttggtggttaccacaacatgag
gaactctattaaatggacaaggcattaggaaggtaggaaacactggacta
gaataacacatgaccttgattctctaactcacttttttcctgtcttagac
aatacccctcataaaggcaccttaaactttgtgtgttgagaaaaaacctt
tacatatattttttaaaaaaggggacacatggtatttactgatgggtaac
agttgaaggtattaaaatactctaatcttcagaacattttcactgtacca
gatttagtcttcagtactgaaaaaacacacacacacacacacaaaatgga
tgtgccaaaactatccaaaggaaggcttaacaaaattatgatgtccaaga
attttaactttttaagacaaaaacacagaaaaaaggaccctcaccagata
tcagatgcagaaacaatagaaatcatccagaaaacatgaaaatcttaacc
tagcacatctacaatctatagcagacaggcttatccataacctagcacat
ctacaatctatagcagataggcttatccataacctagcacatctacaatc
tatagcagataggcttatccatacgtagtgggaaagcacatgaaggaatg
tcatatttaacaaatggtactagaacaacacacatctacgtgcaaataaa
tacaactggctcctgcggaacgacacttgtggttgttttctggtcctcac
atacacctgtgcacacacatgcatccacactcctgaatagatgctgaaca
ttattcattattaatatgaaaataaaaacaatgagatatctttcattatg
cctaaaggaattgagcaaaggactggtgggtgtggctcagatgggaaaaa
tgctttgtctagcaagcagcagctctggtctgttctagcatcacatgcac
atgaagaatgaatgaatgatgaatgaagagctactcctgggtgccttaga
attcagatgttgagttatacggtagaaa
gaattcacttggacaaccggatccttctacggcaaagcttttcttgcttc
aacataaggaagaccccgaactggaaaatggtgctgcttatatagcccgc
agcgtgacgtttcagcacctgatgtggcgtgacagcacctgattagttgc
tcgcccatcaccccattactacgccccgagatgggcagtgactgggcgtg
aatttactcttgcacttgcacataaggcttgtttactagctaggcgcagt
ggaagccagcaccatcttataatggcgattgctcacagcacggctctcca
cactgggcatatatccagaagatgttccaactgttaataagaacacatgc
tccactatgttcatagcagcctttggtttttgttctgcatcaaaaggctc
tgattcctttgagcaagtaagagctttctgtagttgctcctttatcaata
gaacattttatatcatgttgtatttcctaggttttgaagatcagcttttc
ttatacactggggagattttacagtcattactcaattcagaacttatttt
taactgggacacagaagaccattctcatttttctttgtttgtttgtatgt
ggtatatgcataaaacacttacataacttgtttgttttgtattgttttta
atactcaaaagaactgaagatgaaaacacaagttgatgagattccatcat
tgtgaacattcccctgaaaccataacctttcagattaagcagattctaca
atttattggatagcttaaaagaaatcacataagaattgttgtattatcat
gtaaatacagtgctttatttacagaatgttatccacttccccttcaggaa
atggaaataaacaaagtagtagtgtgatttaataacaagacgtgggctaa
gtgtggtggtacatgcctttgatcccagtgctccagaggcagatggagct
ctgatttaagagtccagttggtctacagagacaggtccagttcagccagt
tcttgtgaaaggtttctctgtgaacaattccattgtagagagttaaaatc
tgtactaacgtttgtgattcatttgaatgtgaaatagattcatgctggag
ctgaccttagcatttaacaatctgctgacttaagtggaagtgaccaaatg
ctaatgtcaattatgttcctgcatgtcatttcctcttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_23064988_23066113
seq2: B6Ng01-214J05.b_35_1162 (reverse)

seq1  TTTCTACCGTAT-ACTC-ACATCTGAATTCTAAGGCCACCCAGGAGTAGG  48
      |||||||||||| |||| ||||||||||||||||| |||||||||||| |
seq2  TTTCTACCGTATAACTCAACATCTGAATTCTAAGG-CACCCAGGAGTA-G  48

seq1  CTCTTCATTCATTCATTCATTCATTCCTTCATGTGCATGTGATGCTAGAA  98
      ||||||||||| ||||||||||||| ||||||||||||||||||||||||
seq2  CTCTTCATTCA-TCATTCATTCATT-CTTCATGTGCATGTGATGCTAGAA  96

seq1  CAGAACCAGAGCTGCCTGCTTGCTAGAC-AAGCATTTTT-CCATCTGAGC  146
      ||| |||||||||| ||||||||||||| |||||||||| ||||||||||
seq2  CAG-ACCAGAGCTG-CTGCTTGCTAGACAAAGCATTTTTCCCATCTGAGC  144

seq1  CACACCCA-CAGTCCTTTGCTCAATTCC-TTAGGCAT-ATG-AAGATATC  192
      |||||||| ||||||||||||||||||| |||||||| ||| ||||||||
seq2  CACACCCACCAGTCCTTTGCTCAATTCCTTTAGGCATAATGAAAGATATC  194

seq1  TCATTGTTTTTATTTTCATATTAATAATGAATAATGTTCAGCATCTATTC  242
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTGTTTTTATTTTCATATTAATAATGAATAATGTTCAGCATCTATTC  244

seq1  AGGAGTGTGGATGCATGTGTGTGCACAGGTGTATGTGAGGACCAGAAAAC  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGTGTGGATGCATGTGTGTGCACAGGTGTATGTGAGGACCAGAAAAC  294

seq1  AACCACAAGTGTCGTTCCGCAGGAGCCAGTTGTATTTATTTGCACGTAGA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCACAAGTGTCGTTCCGCAGGAGCCAGTTGTATTTATTTGCACGTAGA  344

seq1  TGTGTGTTGTTCTAGTACCATTTGTTAAATATGACATTCCTTCATGTGCT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTTGTTCTAGTACCATTTGTTAAATATGACATTCCTTCATGTGCT  394

seq1  TTCCCACTACGTATGGATAAGCCTATCTGCTATAGATTGTAGATGTGCTA  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCACTACGTATGGATAAGCCTATCTGCTATAGATTGTAGATGTGCTA  444

seq1  GGTTATGGATAAGCCTATCTGCTATAGATTGTAGATGTGCTAGGTTATGG  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTATGGATAAGCCTATCTGCTATAGATTGTAGATGTGCTAGGTTATGG  494

seq1  ATAAGCCTGTCTGCTATAGATTGTAGATGTGCTAGGTTAAGATTTTCATG  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGCCTGTCTGCTATAGATTGTAGATGTGCTAGGTTAAGATTTTCATG  544

seq1  TTTTCTGGATGATTTCTATTGTTTCTGCATCTGATATCTGGTGAGGGTCC  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGGATGATTTCTATTGTTTCTGCATCTGATATCTGGTGAGGGTCC  594

seq1  TTTTTTCTGTGTTTTTGTCTTAAAAAGTTAAAATTCTTGGACATCATAAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTCTGTGTTTTTGTCTTAAAAAGTTAAAATTCTTGGACATCATAAT  644

seq1  TTTGTTAAGCCTTCCTTTGGATAGTTTTGGCACATCCATTTTGTGTGTGT  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTAAGCCTTCCTTTGGATAGTTTTGGCACATCCATTTTGTGTGTGT  694

seq1  GTGTGTGTGTTTTTTCAGTACTGAAGACTAAATCTGGTACAGTGAAAATG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTGTGTTTTTTCAGTACTGAAGACTAAATCTGGTACAGTGAAAATG  744

seq1  TTCTGAAGATTAGAGTATTTTAATACCTTCAACTGTTACCCATCAGTAAA  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAAGATTAGAGTATTTTAATACCTTCAACTGTTACCCATCAGTAAA  794

seq1  TACCATGTGTCCCCTTTTTTAAAAAATATATGTAAAGGTTTTTTCTCAAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCATGTGTCCCCTTTTTTAAAAAATATATGTAAAGGTTTTTTCTCAAC  844

seq1  ACACAAAGTTTAAGGTGCCTTTATGAGGGGTATTGTCTAAGACAGGAAAA  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAAAGTTTAAGGTGCCTTTATGAGGGGTATTGTCTAAGACAGGAAAA  894

seq1  AAGTGAGTTAGAGAATCAAGGTCATGTGTTATTCTAGTCCAGTGTTTCCT  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGAGTTAGAGAATCAAGGTCATGTGTTATTCTAGTCCAGTGTTTCCT  944

seq1  ACCTTCCTAATGCCTTGTCCATTTAATAGAGTTCCTCATGTTGTGGTAAC  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCCTAATGCCTTGTCCATTTAATAGAGTTCCTCATGTTGTGGTAAC  994

seq1  CACCAACCATCAGATTTTTTTTTCGTTGCTACTTAATAGCTGTAATTTTA  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAACCATCAGATTTTTTTTTCGTTGCTACTTAATAGCTGTAATTTTA  1044

seq1  CTACTGTTCAAGTTCAAGAAAAAGACCTAATGGCAGTCCCACTGTAAAAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTCAAGTTCAAGAAAAAGACCTAATGGCAGTCCCACTGTAAAAG  1094

seq1  AGCTTAATGATCACTGATATAATTTTAGGAATTC  1126
      ||||||||||||||||||||||||||||||||||
seq2  AGCTTAATGATCACTGATATAATTTTAGGAATTC  1128

seq1: chr7_22872313_22873502
seq2: B6Ng01-214J05.g_64_1252

seq1  GAATTCACTTGGACAACCGGATCCTTCTACGGCAAAGCTTTTCTTGCTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTGGACAACCGGATCCTTCTACGGCAAAGCTTTTCTTGCTTC  50

seq1  AACATAAGGAAGACCCCGAACTGGAAAATGGTGCTGCTTATATAGCCCGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATAAGGAAGACCCCGAACTGGAAAATGGTGCTGCTTATATAGCCCGC  100

seq1  AGCGTGACGTTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGTGACGTTTCAGCACCTGATGTGGCGTGACAGCACCTGATTAGTTGC  150

seq1  TCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGCCCATCACCCCATTACTACGCCCCGAGATGGGCAGTGACTGGGCGTG  200

seq1  AATTTACTCTTGCACTTGCACATAAGGCTTGTTTACTAGCTAGGCGCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACTCTTGCACTTGCACATAAGGCTTGTTTACTAGCTAGGCGCAGT  250

seq1  GGAAGCCAGCACCATCTTATAATGGCGATTGCTCACAGCACGGCTCTCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCAGCACCATCTTATAATGGCGATTGCTCACAGCACGGCTCTCCA  300

seq1  CACTGGGCATATATCCAGAAGATGTTCCAACTGTTAATAAGAACACATGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGGCATATATCCAGAAGATGTTCCAACTGTTAATAAGAACACATGC  350

seq1  TCCACTATGTTCATAGCAGCCTTTGGTTTTTGTTCTGCATCAAAAGGCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACTATGTTCATAGCAGCCTTTGGTTTTTGTTCTGCATCAAAAGGCTC  400

seq1  TGATTCCTTTGAGCAAGTAAGAGCTTTCTGTAGTTGCTCCTTTATCAATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCTTTGAGCAAGTAAGAGCTTTCTGTAGTTGCTCCTTTATCAATA  450

seq1  GAACATTTTATATCATGTTGTATTTCCTAGGTTTTGAAGATCAGCTTTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATTTTATATCATGTTGTATTTCCTAGGTTTTGAAGATCAGCTTTTC  500

seq1  TTATACACTGGGGAGATTTTACAGTCATTACTCAATTCAGAACTTATTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATACACTGGGGAGATTTTACAGTCATTACTCAATTCAGAACTTATTTT  550

seq1  TAACTGGGACACAGAAGACCATTCTCATTTTTCTTTGTTTGTTTGTATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTGGGACACAGAAGACCATTCTCATTTTTCTTTGTTTGTTTGTATGT  600

seq1  GGTATATGCATAAAACACTTACATAACTTGTTTGTTTTGTATTGTTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATATGCATAAAACACTTACATAACTTGTTTGTTTTGTATTGTTTTTA  650

seq1  ATACTCAAAAGAACTGAAGATGAAAACACAAGTTGATGAGATTCCATCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCAAAAGAACTGAAGATGAAAACACAAGTTGATGAGATTCCATCAT  700

seq1  TGTGAACATTCCCCTGAAACCATAACCTTTCAGATTAAGCAGATTCTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAACATTCCCCTGAAACCATAACCTTTCAGATTAAGCAGATTCTACA  750

seq1  ATTTATTGGATAGCTTAAAAGAAATCACATAAGAATTGTTGTATTATCAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTGGATAGCTTAAAAGAAATCACATAAGAATTGTTGTATTATCAT  800

seq1  GTAAATACAGTGCTTTATTTACAGAATGTTATCCACTTCCCCTTCAGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAATACAGTGCTTTATTTACAGAATGTTATCCACTTCCCCTTCAGGAA  850

seq1  ATGGAATTAAACAAAGTAGTAGTGTGATTTAATAACAAGACGTGGGCTAA  900
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAAATAAACAAAGTAGTAGTGTGATTTAATAACAAGACGTGGGCTAA  900

seq1  GTGTGGTGGTACATGCCTTTGATCCCAGTGCTCCAGAGGCAGATGGAGCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGGTGGTACATGCCTTTGATCCCAGTGCTCCAGAGGCAGATGGAGCT  950

seq1  CTGATTTAAGAGTCCAGTTGGTCTACAGAGACAGGTCCAGGTCAGCCAGT  1000
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTGATTTAAGAGTCCAGTTGGTCTACAGAGACAGGTCCAGTTCAGCCAGT  1000

seq1  --CTGTGAAAAGGTTCCTCTGGTGAACAATTCCATTGTAGAGAGTTAAAA  1048
         |||| ||||||| |||| |||||||||||||||||||||||||||||
seq2  TCTTGTG-AAAGGTTTCTCT-GTGAACAATTCCATTGTAGAGAGTTAAAA  1048

seq1  TCTGTACTAAAACGTTTGTGGAATCATTTTGATGTGGAAATAGATTCATG  1098
      ||||||||  ||||||||| || ||||||  |||| ||||||||||||| 
seq2  TCTGTACT--AACGTTTGT-GATTCATTTGAATGT-GAAATAGATTCAT-  1093

seq1  GTTGGAGCTGACATTAGCAATTAAC-ATCTGCTGAC-TAAGTG--AGTGA  1144
      | |||||||||| |||||| ||||| |||||||||| ||||||  |||||
seq2  GCTGGAGCTGACCTTAGCATTTAACAATCTGCTGACTTAAGTGGAAGTGA  1143

seq1  ACAAAATTTGCTAATGTCAATTAATGTCCTGCATG-CATTT--TCTTTA  1190
       ||||   |||||||||||||||   ||||||||| |||||  ||||||
seq2  CCAAA---TGCTAATGTCAATTATGTTCCTGCATGTCATTTCCTCTTTA  1189