BAC Information

Click to search

BAC

Clone NameB6Ng01-214L17
Chromosome7 (Build37)
Map Location 97,530,990 - 97,638,785
singlet/doubletdoublet
Overlap geneSytl2, Ccdc89, Crebzf, Tmem126a, Tmem126b, B230218P12Rik
Upstream geneFzd4, Prss23, LOC100040001, Me3, Ccdc81, l7Rn6, Eed, E230029C05Rik, EG384719, 2310010J17Rik, Picalm, Ccdc83
Downstream geneLOC666689, LOC621816, LOC100039943, Dlg2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-214L17.bB6Ng01-214L17.g
ACCGA031903GA031904
length9621,017
definitionB6Ng01-214L17.b B6Ng01-214L17.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(97,638,066 - 97,638,785)(97,530,990 - 97,532,007)
sequence
gaattcctttttataaatttactccatattgttacgatttaggatgcatt
atctgattcctaccactgacatgttacattgtgcctttttcacatgaggt
tgtaattcacaaattcaagatcacagaactactaaataacaggtttgtaa
cttaatactagtgctttgggttcgttccacaaaactcttcttaatcctcc
aagaagtgacatttttatgaaaaacaagtttgtcttagcaagggttacta
ttgctgtgaagaaacccctctaccgaagggaaagtttttatttggcttaa
actttcaaatcactgttcatcatcacaggaagtcaggacggaaactcgaa
caggactggaaccttgaggtaggagctgatgcacaggccatacaagggtg
ctgcttattggtttgttgctgtggctcgctcagcctgatttcttacagat
cactcacaaaggactgggccctccccatcaaccactaattaagaaaatgc
tctacaggttagcctacagcccaatttttattgaggtaatttctgaattg
tggtttcttctttttagataactctaactcactggttctctaccttccta
atgctgtgaccctctaatatagtttccatgttgtggtgatacacaatcgt
aaaattatttcattgcaacctcataactgtaactttgctactgttatgaa
ccatgatgtaaatatctgatatgcaggacatctgatatcacagagaacca
ctgcttttgttatcagattatgtcaagttgacataacactctctggcaca
ttgattattcagacattaattatatttatgaatgttataatattgaatta
aatgctaaatatctaactttcacatgtttactaaattgagagctacatta
gtacaagagtaaaatagccctattattgtataagatgaataaaaatattt
ttaatccattaa
gaattcctcttacagaaatactagaaactgtagagaaggctgaggctcca
tcactaactgacagtagttttgatgttgggcttgagagacttcgtaacga
tatgtcggaaggaccttgccgactccaggcatcagggagaagagacactt
tatagaagcagccttcgcaagtagagcaagcagggttcatgggggaaata
ccccatcatattttggatggcccaggagcctctaaaatgaaggtttcatg
tagtggtttggaatctcaaatcaaccagtgtgataggcaattaggaggag
atgaagctgtgactggcccattgatagatgtccaggataacaaaagtggg
tttgaggtccctgaatgctcacaacttcatgaataccataaaatagagac
caatggaactatacaatttgtagaggacaaaggcaaagaaaaggtcatta
caggagaaacacaggcttcccaggaaccaggctttgaagaagctcctaaa
gaaatgagtgtgtccagaaataagcactccattgttcttctggaaacaaa
aggaaaggctataaaaacgagggaagttaagttggtactagcaacacctt
atgatagacaagaggaacagcaagggccagaggcctgctcagaatatgag
ttttcagatgggaacaccagctctaaccgggagaactggagaaatacctc
cagtgagtgtttgagaatttttactccattgaagagtctgcttaatgaga
tacatgtgcaaaggatgactttttaaagattggggtcattttgatattgt
tccagaacaatattcttcttatgttagttctctcaaccctttcttaatta
gagaaagacattttatctattttctttatttaggataatttgaataaaac
tagcttttctcacgatgctgtgtattcagaatcatctcatagcatctatt
aaaactgtagattctgacagtatgcttaagtaactttttttttagatcag
caaatccttacgatact
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_97638066_97638785
seq2: B6Ng01-214L17.b_40_758 (reverse)

seq1  TCAGATATTTACATCATGGTTCATAACAGTAGCAAAGTTACAGTTATGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGATATTTACATCATGGTTCATAACAGTAGCAAAGTTACAGTTATGAG  50

seq1  GTTGCAATGAAATAATTTTACGATTGTGTATCACCACAACATGGAAACTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATGAAATAATTTTACGATTGTGTATCACCACAACATGGAAACTA  100

seq1  TATTAGAGGGTCACAGCATTAGGAAGGTAGAGAACCACTGAGTTAGAGTT  150
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TATTAGAGGGTCACAGCATTAGGAAGGTAGAGAACCAGTGAGTTAGAGTT  150

seq1  ATCTAAAAAGAAGAAACCACAATTCAGAAATTACCTCAATAAAAATTGGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAAAAAGAAGAAACCACAATTCAGAAATTACCTCAATAAAAATTGGG  200

seq1  CTGTAGGCTAACCTGTAGAGCATTTTCTTAATTAGTGGTTGATGGGGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGGCTAACCTGTAGAGCATTTTCTTAATTAGTGGTTGATGGGGAGG  250

seq1  GCCCAGTCCTTTGTGAGTGATCTGTAAGAAATCAGGCTGAGCGAGCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTCCTTTGTGAGTGATCTGTAAGAAATCAGGCTGAGCGAGCCACA  300

seq1  GCAACAAACCAATAAGCAGCACCCTTCTATGGCCTCTGCATCAGCTCCTA  350
      |||||||||||||||||||||||||| |||||||| ||||||||||||||
seq2  GCAACAAACCAATAAGCAGCACCCTTGTATGGCCTGTGCATCAGCTCCTA  350

seq1  CCTCAAGGTTCCAGTCCTGTTTGAGTTTCCGTCCTGACTTCCTGTGATGA  400
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CCTCAAGGTTCCAGTCCTGTTCGAGTTTCCGTCCTGACTTCCTGTGATGA  400

seq1  TGAACAGTGATTTGAAAGTTTAAGCCAAATAAAAACTTTCCCTTTGGTAG  450
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TGAACAGTGATTTGAAAGTTTAAGCCAAATAAAAACTTTCCCTTCGGTAG  450

seq1  AGGTGTTTCTTCACAGCAATAGTAACCCTTGCTAAGACAAACTTGTTCTT  500
      ||| ||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AGGGGTTTCTTCACAGCAATAGTAACCCTTGCTAAGACAAACTTGTTTTT  500

seq1  CATAAAAATGTCACTTCTTGGAGGATTAAGAAGAGTTTTGTGGAATGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  CATAAAAATGTCACTTCTTGGAGGATTAAGAAGAGTTTTGTGGAACGAAC  550

seq1  CCAAAGCACTAGTATTAAGTTACAAACCTGTTATTTAGTAGTTCTGTGAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAAGCACTAGTATTAAGTTACAAACCTGTTATTTAGTAGTTCTGTGAT  600

seq1  CTTGAATTTGTGAATTACAACTTCATGTGAAAAAGGCACAATGTAACATG  650
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  CTTGAATTTGTGAATTACAACCTCATGTGAAAAAGGCACAATGTAACATG  650

seq1  TCAGTGGTAGGAATCAGATAATGCATCCTAAATCGTAAAAATATTGAGTA  700
      |||||||||||||||||||||||||||||||||||||| ||||| |||||
seq2  TCAGTGGTAGGAATCAGATAATGCATCCTAAATCGTAACAATATGGAGTA  700

seq1  AATTTATATAAAAGGAATTC  720
      |||||||| |||||||||||
seq2  AATTTATA-AAAAGGAATTC  719

seq1: chr7_97530990_97532007
seq2: B6Ng01-214L17.g_63_1079

seq1  GAATTCCATCTTACAGAAATACAAGAAACTGTAGAGAAGGCTGAGGCTCC  50
      ||||||| |||||||||||||| |||||||||||||||||||||||||||
seq2  GAATTCC-TCTTACAGAAATACTAGAAACTGTAGAGAAGGCTGAGGCTCC  49

seq1  ATCAGTAACTGAGAGTAGTTTTGATGTTGGTCTTGAGAAACTTCTTAAAG  100
      |||| ||||||| ||||||||||||||||| ||||||| ||||| ||| |
seq2  ATCACTAACTGACAGTAGTTTTGATGTTGGGCTTGAGAGACTTCGTAACG  99

seq1  AGATGTCGGAAGGACCTTGCCAGCTCCAGGCATCAGGGAGAAGAGACACT  150
      | |||||||||||||||||||  |||||||||||||||||||||||||||
seq2  ATATGTCGGAAGGACCTTGCCGACTCCAGGCATCAGGGAGAAGAGACACT  149

seq1  TTAGAGAAGCAGCCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAAAT  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAAGCAGCCTTCGCAAGTAGAGCAAGCAGGGTTCATGGGGGAAAT  199

seq1  ACCCCATCATATTTTGGATGGCCCAGGAGCCTCTAAAATGAAGGTTTCAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCATCATATTTTGGATGGCCCAGGAGCCTCTAAAATGAAGGTTTCAT  249

seq1  GTAGTGGTTTGGAATCTCAAATCAGCCAGTGTGATAAGCAATTAGGAGGA  300
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  GTAGTGGTTTGGAATCTCAAATCAACCAGTGTGATAGGCAATTAGGAGGA  299

seq1  GATGAAGCTGTGACTGGCCCATTGATAGATGTCCAGGATAACAAAAGTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAAGCTGTGACTGGCCCATTGATAGATGTCCAGGATAACAAAAGTGG  349

seq1  GTTTGAGGTCCCTGAATGCTCACAACTTCATGAAGACCATAAAATAGAGA  400
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTTTGAGGTCCCTGAATGCTCACAACTTCATGAATACCATAAAATAGAGA  399

seq1  CCAATGGAACTATACAATTTGTAGAGGACAAAGGCAGAGAAAAGGTCATT  450
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CCAATGGAACTATACAATTTGTAGAGGACAAAGGCAAAGAAAAGGTCATT  449

seq1  ACAGGAGAAACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCTCCTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGAGAAACACAGGCTTCCCAGGAACCAGGCTTTGAAGAAGCTCCTAA  499

seq1  AGAAATGAGTGTGTCCAGAAATAAGCACTCCATTGTTCTTCTGGAAACAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATGAGTGTGTCCAGAAATAAGCACTCCATTGTTCTTCTGGAAACAA  549

seq1  AAGGAAAGGCTATAAAAACGAGGGAAGTTAAGTTGGTACTAGCAACACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  AAGGAAAGGCTATAAAAACGAGGGAAGTTAAGTTGGTACTAGCAACACCT  599

seq1  TATAAGAGACAAGAGGAAGAGCAAGGGCCAGAGGCATGCTCAGAATATGA  650
      ||| | |||||||||||| |||||||||||||||| ||||||||||||||
seq2  TATGATAGACAAGAGGAACAGCAAGGGCCAGAGGCCTGCTCAGAATATGA  649

seq1  GTTTTCAGATGGGAACACCAGCTCTAACCGGGAGAACTGGAGAAATACCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCAGATGGGAACACCAGCTCTAACCGGGAGAACTGGAGAAATACCT  699

seq1  CCAGTGAGTGTTTGAGAATTTTTACTCCATTGAAGAGTCTGCTTAATGAG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGAGTGTTTGAGAATTTTTACTCCATTGAAGAGTCTGCTTAATGAG  749

seq1  ATACATGTGCAAAGGATGACTTTTTAAAGATTGGGGTCATTTTGATATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACATGTGCAAAGGATGACTTTTTAAAGATTGGGGTCATTTTGATATTG  799

seq1  TTCCAGAACAATATTCTTCTTTTGTTAGTTCTCTCAAACCTTTCTTAATT  850
      ||||||||||||||||||||| ||||||||||||||| ||||||||||||
seq2  TTCCAGAACAATATTCTTCTTATGTTAGTTCTCTCAACCCTTTCTTAATT  849

seq1  AGAGAAAGACATTTTATCTATTTTCTTTATTT-GGATAATTTGAATAAAA  899
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  AGAGAAAGACATTTTATCTATTTTCTTTATTTAGGATAATTTGAATAAAA  899

seq1  ACAGCTTTTCTCACAAGGCTGTGT-TTCAGAATCATCTCATAGAATCTAT  948
        |||||||||||| | ||||||| |||||||||||||||||| ||||||
seq2  CTAGCTTTTCTCACGATGCTGTGTATTCAGAATCATCTCATAGCATCTAT  949

seq1  T-AAACTGTTAGATTCTGACAGTATTTTTAAATAACTTTTTTTTTAGATT  997
      | |||||| ||||||||||||||||  |||| ||||||||||||||||| 
seq2  TAAAACTG-TAGATTCTGACAGTATGCTTAAGTAACTTTTTTTTTAGATC  998

seq1  AGCAAAATCCTTTAAGATACT  1018
      ||| |||||| ||| ||||||
seq2  AGC-AAATCC-TTACGATACT  1017