BAC Information

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BAC

Clone NameB6Ng01-216C08
Chromosome7 (Build37)
Map Location 150,285,503 - 150,286,355
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5
Downstream geneKcnq1, Cdkn1c, Slc22a18, Phlda2, Nap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216C08.bB6Ng01-216C08.g
ACCGA032911GA032912
length1,207856
definitionB6Ng01-216C08.b B6Ng01-216C08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccaggatacaatgagtagacaaaacctagggataataggagtaga
ggagaatgaagattttcaacttaaagggtcagcaaatatcttcaacaaaa
ttatagaagaaaacttcccaaacctaaagtaagagatgcccatgaacata
caagaaccctacaaaactccaaatagactggaccagaaaagaaattcctc
ccaacacataataatcagaacaacaaatgcactaaatatagaatattaaa
agtagtaagggaaaaaggtcaagtgacatataaaggcaggcctattagaa
ttacatcagacttctcaccagagactatgaaagccagaaatcctggacag
atgttatacagatcctaagaaaacacaaatgccagcccaggctgctatac
ccagcaaaattctcaattaccatagatggaaaaaccaaaatattccatga
taagaccaaattcacacaatgtctttcctcatatccagcccttcaaagga
taataaagggaaaacaacaacacaagtacagaaaccacaccctagaaaaa
gcaagaaagtaatccttcaacaaacctaatagaagatagccacaagaaca
gaatcccaagtttaacaacaaaaataacaagaagcaacaattacttttct
ttaatttctcttaacatcaatagactcaattccccaataaaaagacatag
actaatagactggctacacaaacaggacacaacattttgctgctgacagg
aaacccacctcagggacaaagacagacactacctcagagtgaaaggctgg
aaaacaattttccaagcaaatggtcagaagaaacaagctggagtagtcat
tttaatatcgaacaaactactttccaacccaaagttatcaaaaaagacaa
ggaggggcacatcatactcatcaaaggcaaaatctaccaagatgaactct
caattctgaatatgctccaaatacaaggacatccacattaattaagaaac
tttagtaagccctaagcacatatgcacctcacacaatatagtgggagacg
ttaacacccccactgcaccatgggacagattctggtacagaaactaatag
agacccatgaacacctacgaaatatgaacatggaattaatgaattctacg
gaccttattcctaaataagaaattacctctttctcagaccacaatggtat
acttcct
gaattctgtggcagatggtggtagctccctggaagggggcccttcagtat
ttgctagaactgaatctatcagcataagccaagtgccaacagccctcctg
cctagaagtgcttttcatgcttagatggggcctcaggggtatgtgtggct
ttctagagacctgagcaagatcttaggcagctttaccacaggtctcaact
tcagactaaagtaagcactatgtaagactaaagtaagttctgatacctca
ctagcactggcttggtgctggtgagggaatgacagggtatcatttgcaga
gacagcctggtcaccagttaaccctcacacaactttgttaaattgtgtat
aactgtggccccatggggtggttcctggtgccttattgggctgctggtct
cccctctgaacacatccttcccactgtgttcttaagagactgtccttgga
gcagtcacaaaagggagctcacaaaaggctgtttgaatgtgtctgacata
catgcacactgcacacacttgcacacaaccctcagtattctcagccggtt
accagcttggcatcttggaagaggagagtgtgggtgggtgtggcctatgg
gtaaggagtggcggaatgacagcatgcctagctcctttctattctgcata
tggactggctcagaaggaaacttttcttcacaaatgactgtccagccttt
ctcccacagagcaaagcacagtgggttcttggtgcacctagtgagatgac
tttcagatacagtgtgcgtgggagggaggataagatatcagggccaaagg
atgctgtgacaagcccaatgttttgtccctaccgaccctggggtcctttc
agggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150285503_150286355
seq2: B6Ng01-216C08.g_68_923

seq1  GAATTCTGTGGCAGATGGTGGTAGCTCCCTGGAAGGGGGCCCTTCAGTAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGGCAGATGGTGGTAGCTCCCTGGAAGGGGGCCCTTCAGTAT  50

seq1  TTGCTAGAACTGAATCTATCAGCATAAGCCAAGTGCCAACAGCCCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTAGAACTGAATCTATCAGCATAAGCCAAGTGCCAACAGCCCTCCTG  100

seq1  CCTAGAAGTGCTTTTCATGCTTAGATGGGGCCTCAGGGGTATGTGTGGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGAAGTGCTTTTCATGCTTAGATGGGGCCTCAGGGGTATGTGTGGCT  150

seq1  TTCTAGAGACCTGAGCAAGATCTTAGGCAGCTTTACCACAGGTCTCAACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGAGACCTGAGCAAGATCTTAGGCAGCTTTACCACAGGTCTCAACT  200

seq1  TCAGACTAAAGTAAGCACTATGTAAGACTAAAGTAAGTTCTGATACCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGACTAAAGTAAGCACTATGTAAGACTAAAGTAAGTTCTGATACCTCA  250

seq1  CTAGCACTGGCTTGGTGCTGGTGAGGGAATGACAGGGTATCATTTGCAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACTGGCTTGGTGCTGGTGAGGGAATGACAGGGTATCATTTGCAGA  300

seq1  GACAGCCTGGTCACCAGTTAACCCTCACACAACTTTGTTAAATTGTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCCTGGTCACCAGTTAACCCTCACACAACTTTGTTAAATTGTGTAT  350

seq1  AACTGTGGCCCCATGGGGTGGTTCCTGGTGCCTTATTGGGCTGCTGGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGCCCCATGGGGTGGTTCCTGGTGCCTTATTGGGCTGCTGGTCT  400

seq1  CCCCTCTGAACACATCCTTCCCACTGTGTTCTTAAGAGACTGTCCTTGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTGAACACATCCTTCCCACTGTGTTCTTAAGAGACTGTCCTTGGA  450

seq1  GCAGTCACAAAAGGGAGCTCACAAAAGGCTGTTTGAATGTGTCTGACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTCACAAAAGGGAGCTCACAAAAGGCTGTTTGAATGTGTCTGACATA  500

seq1  CATGCACACTGCACACACTTGCACACAACCCTCAGTATTCTCAGCCGGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCACACTGCACACACTTGCACACAACCCTCAGTATTCTCAGCCGGTT  550

seq1  ACCAGCTTGGCATCTTGGAAGAGGAGAGTGTGGGTGGGTGTGGCCTATGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGCTTGGCATCTTGGAAGAGGAGAGTGTGGGTGGGTGTGGCCTATGG  600

seq1  GTAAGGAGTGGCGGAATGACAGCATGCCTAGCTCC-TTCTATTCTGCATA  649
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  GTAAGGAGTGGCGGAATGACAGCATGCCTAGCTCCTTTCTATTCTGCATA  650

seq1  TGGACTGGCTCAGAAGGAAAC-TTTCTTCACAAATGACTGTCCAGCC-TT  697
      ||||||||||||||||||||| ||||||||||||||||||||||||| ||
seq2  TGGACTGGCTCAGAAGGAAACTTTTCTTCACAAATGACTGTCCAGCCTTT  700

seq1  CTCCCACAGAGCAGAGCACAGTGGGTTCTTGGTGCACCTAGTGAGATGAC  747
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CTCCCACAGAGCAAAGCACAGTGGGTTCTTGGTGCACCTAGTGAGATGAC  750

seq1  -TTCAGATACAGTGTGCGTGGGAGGGAGGATAAGATATCAGGGCCAAAGG  796
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGATACAGTGTGCGTGGGAGGGAGGATAAGATATCAGGGCCAAAGG  800

seq1  ATGCTG-GACAAGCCCAATTGTTTTTGTCCTACCGACTCTGGGGTCCCTT  845
      |||||| ||||||||||| ||||||   ||||||||| ||||||||| ||
seq2  ATGCTGTGACAAGCCCAA-TGTTTTGTCCCTACCGACCCTGGGGTCCTTT  849

seq1  CATGGGAG  853
      || |||||
seq2  CA-GGGAG  856