BAC Information

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BAC

Clone NameB6Ng01-216D11
Chromosome7 (Build37)7 (Build37)
Map Location 14,404,187 - 14,404,74114,073,317 - 14,074,456
singlet/doubletsingletsinglet
Overlap geneSult2a1
Upstream geneZfp329, Zfp110, Zfp128, Zscan22, Rps5, 2310014L17Rik, 1810019N24Rik, Zfp324, Zfp446, Slc27a5, ZBTB45, LOC100042553, Trim28, Chmp2a, Ube2m, Mzf1, V1rj3, LOC100043156, V1rk1, LOC666177, EG232887, V1rj2, 6330408A02Rik, Lig1, Pla2g4c, LOC666225, Cabp5, LOC666232, Gm767, LOC666243, 9230107M04Rik, EG666256, LOC666267, LOC100042624, LOC100043194
Downstream geneEG620627, EG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-216D11.bB6Ng01-216D11.g
ACCGA032963GA032964
length9591,130
definitionB6Ng01-216D11.b B6Ng01-216D11.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(14,404,187 - 14,404,741)(14,073,317 - 14,074,456)
sequence
gaattcagtttccagtacacgtggaagttcacaatgccctattaaaacat
agacaccaatttttcttgtaagactgcttttgttgtaccccataagtttg
gatatcttgtggcttcattttcattaaactccaaaaagcctctaatttct
ttctttatttcttccttgaacaagttatcattgagtagagtgatgttcag
cttcaacgtttatgtgggttttctattatttatgttgttattgaagatca
gccttagtctttggtgatctgataggatgtatgggattacttcaatattt
ttatctgctgatcattcttatttataatagccagaagctggaaagaaccc
agatatccctcaacagaaaaatggatacagaaaatgtgatacatttacag
aatggaatactatgcaactattaaagacaataaatttgattttgtatccc
aggtccctcagagaccagtctgtgcaggagagccttcagactgcagaagc
agtatagcttctgggacaggcccctttttcaggccttcatcttcagccag
gaagcagatgttagctccagacatcagtgctccttccatgtcaaaggaga
ggtggcctgaagagagtactcaggagagagttggcctcccaagagtgctg
acagaggctaacagaatcacaagaggaacaagctacagccagagacggct
ataacaactaacgccagagattgccagatggcaaaaggcaaacataagaa
tcttacaaacaagacaggcagtggtgtcacacaccttcaatcccagcact
taggaggcagaggcaggcagatttctgagtttgaggccagcctggtctac
aaagtgagttctaggacagccatggctatatagaggaaccatgcctcaaa
aaaacaaaacaaaaacaaaacaagactcttactaagagaaaccaaactgc
accaccatt
gaattcaatatagaaccaattgccactaggaaagtgacgttatctagaga
cacaaatggcaaatgtcaaagagttaaagcagtcagctgctgtgatgcag
aaggctgagaataatgaatgagaaaggcaattctatactccaatatttat
ctaattatgaatcatatgagacttttaaaaaaacgtcttgctcctaacca
gtagaagagacaaaaatctataaggagatcccagtgaagggatttgccac
acatatatgaattcagaggtcactgtggacaatcaccagaccaggtagtg
ttggacttttctgagcatgaaaattcaaaatatcttcatgagaaccttcc
tgttacccagagaaacttgagatgaaagaagagaggcagtttgactactc
aaggatctccagagagaagcctgatcatgagtccttctttggaagggtct
gccttttgaaagctgtacatagatgctttatcctgaattcagcagtttca
gtcttagctaacattcatattctatttcagtcttgttcatgtgtatgtct
gtgcctctgttactagcattgactatggggatctcttggaagctagaggt
ttctagcactgggttatatcctcaaggcttcatctcagtctttcagaagg
ggaatacttcctgaatgtgaatgcccgtctttacctagggccattcagtg
acagaaactaaggggtgacaccctacatcaaagacaaagaaaatttctgg
atactcctattgcttcctaaagtcttttagcatgtgtccttggtaccaga
agtgtggggtattcctgtgacacctggccatgctttggggaggactgtgg
aaggactttggaactttgagctaacaagatccattccgtgttaagagctc
tgtcagatgttgtgtaggagcttggaagataatgttgaaacatgcagaag
atggaggtccttgcctgtgaggtttcagagggaaaattaagtctcttttg
caggacattgctactttgggtgtgagattctggtggtctggttagctggg
ctgaagaatcagctgtgatttaacaagatacaggactactaagcaaaact
tgcatactggactattgatgctggtagctg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_14404187_14404741
seq2: B6Ng01-216D11.b_50_604

seq1  GAATTCAGTTTCTAGTACACCTGGAAGTTCACAATGCCCTATTAAAACAT  50
      |||||||||||| ||||||| |||||||||||||||||||||||||||||
seq2  GAATTCAGTTTCCAGTACACGTGGAAGTTCACAATGCCCTATTAAAACAT  50

seq1  AGACACCAATTTTCCTTGTAAGACTGCTTTTGTTGTGTCCCATAAGTTTG  100
      ||||||||||||| ||||||||||||||||||||||  ||||||||||||
seq2  AGACACCAATTTTTCTTGTAAGACTGCTTTTGTTGTACCCCATAAGTTTG  100

seq1  AATATCTTGTGGCTTCATTTTCATTAAACTCCAAGAAG-CTCTATTTTCT  149
       ||||||||||||||||||||||||||||||||| ||| ||||| |||||
seq2  GATATCTTGTGGCTTCATTTTCATTAAACTCCAAAAAGCCTCTAATTTCT  150

seq1  TTCTTTATTTCTTCCTTGACCAAGTTATAAATTGAGTAGAGTGATGTTCA  199
      ||||||||||||||||||| ||||||||  ||||||||||||||||||||
seq2  TTCTTTATTTCTTCCTTGAACAAGTTAT-CATTGAGTAGAGTGATGTTCA  199

seq1  GCTTCAACGTTTATGTGGGTTTTCTATTATTTATGTTGTTATTGAAGATC  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAACGTTTATGTGGGTTTTCTATTATTTATGTTGTTATTGAAGATC  249

seq1  AGCCTTAGTCTATGGTGATCTGATAGGATGTATGGGATTACTTCAATATT  299
      ||||||||||| |||||||||||||||||||||||||||||||||||| |
seq2  AGCCTTAGTCTTTGGTGATCTGATAGGATGTATGGGATTACTTCAATA-T  298

seq1  TTTTATCTGCTGATCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAAC  349
      ||||||||||||||||  ||||||||||||||||||||||||||||||||
seq2  TTTTATCTGCTGATCATTCTTATTTATAATAGCCAGAAGCTGGAAAGAAC  348

seq1  CCAGATATCCCTCAACAGAAGAATGGATACAGAAAATGTGATGCATTTAC  399
      |||||||||||||||||||| ||||||||||||||||||||| |||||||
seq2  CCAGATATCCCTCAACAGAAAAATGGATACAGAAAATGTGATACATTTAC  398

seq1  AGAATGGAATACTATGCAGCTATTAAAGACAATAAATTTGGTTTTGTATC  449
      |||||||||||||||||| ||||||||||||||||||||| |||||||||
seq2  AGAATGGAATACTATGCAACTATTAAAGACAATAAATTTGATTTTGTATC  448

seq1  CCAGGTCCCTCAGAGACCAGTCTGTGCAGGAGAGCCTTCAGATGGCAGAA  499
      ||||||||||||||||||||||||||||||||||||||||||  ||||||
seq2  CCAGGTCCCTCAGAGACCAGTCTGTGCAGGAGAGCCTTCAGACTGCAGAA  498

seq1  GCAACATGACTTCTGGGACAGGCCCC-TTTTCAGGCCTTCATCTTCAGCC  548
      |||  ||  ||||||||||||||||| |||||||||||||||||||||||
seq2  GCAGTATAGCTTCTGGGACAGGCCCCTTTTTCAGGCCTTCATCTTCAGCC  548

seq1  AGGAAGC  555
      |||||||
seq2  AGGAAGC  555

seq1: chr7_14073317_14074456
seq2: B6Ng01-216D11.g_66_1195

seq1  GAATTCAATATAGAACCAATTGCCACTAGGAAAGTGACGTTATCTAGAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATATAGAACCAATTGCCACTAGGAAAGTGACGTTATCTAGAGA  50

seq1  CACAAATGGCAAATGTCAAAGAGTTAAAGCAGTCAGCTGCTGTGATGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAATGGCAAATGTCAAAGAGTTAAAGCAGTCAGCTGCTGTGATGCAG  100

seq1  AAGGCTGAGAATAATGAATGAGAAAGGCAATTCTATACTCCAATATTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCTGAGAATAATGAATGAGAAAGGCAATTCTATACTCCAATATTTAT  150

seq1  CTAATTATGAATCATATGAGACTTTTAAAAAAACGTCTTGCTCCTAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTATGAATCATATGAGACTTTTAAAAAAACGTCTTGCTCCTAACCA  200

seq1  GTAGAAGAGACAAAAATCTATAAGGAGATCCCAGTGAAGGGATTTGCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAAGAGACAAAAATCTATAAGGAGATCCCAGTGAAGGGATTTGCCAC  250

seq1  ACATATATGAATTCAGAGGTCACTGTGGACAATCACCAGACCAGGTAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATATATGAATTCAGAGGTCACTGTGGACAATCACCAGACCAGGTAGTG  300

seq1  TTGGACTTTTCTGAGCATGAAAATTCAAAATATCTTCATGAGAACCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGACTTTTCTGAGCATGAAAATTCAAAATATCTTCATGAGAACCTTCC  350

seq1  TGTTACCCAGAGAAACTTGAGATGAAAGAAGAGAGGCAGTTTGACTACTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACCCAGAGAAACTTGAGATGAAAGAAGAGAGGCAGTTTGACTACTC  400

seq1  AAGGATCTCCAGAGAGAAGCCTGATCATGAGTCCTTCTTTGGAAGGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATCTCCAGAGAGAAGCCTGATCATGAGTCCTTCTTTGGAAGGGTCT  450

seq1  GCCTTTTGAAAGCTGTACATAGATGCTTTATCCTGAATTCAGCAGTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTTTTGAAAGCTGTACATAGATGCTTTATCCTGAATTCAGCAGTTTCA  500

seq1  GTCTTAGCTAACATTCATATTCTATTTCAGTCTTGTTCATGTGTATGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTAGCTAACATTCATATTCTATTTCAGTCTTGTTCATGTGTATGTCT  550

seq1  GTGCCTCTGTTACTAGCATTGACTATGGGGATCTCTTGGAAGCTAGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTGTTACTAGCATTGACTATGGGGATCTCTTGGAAGCTAGAGGT  600

seq1  TTCTAGCACTGGGTTATATCCTCAAGGCTTCATCTCAGTCTTTCAGAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCACTGGGTTATATCCTCAAGGCTTCATCTCAGTCTTTCAGAAGG  650

seq1  GGAATACTTCCTGAATGTGAATGCCCGTCTTTACCTAGGGCCATTCAGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATACTTCCTGAATGTGAATGCCCGTCTTTACCTAGGGCCATTCAGTG  700

seq1  ACAGAAACTAAGGGGTGACACCCTACATCAAAGACAAAGAAAATTTCTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAACTAAGGGGTGACACCCTACATCAAAGACAAAGAAAATTTCTGG  750

seq1  ATACTCCTATTGCTTCCTAAAGTCTTTTAGCATGTGTCCTTGGTACCAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCCTATTGCTTCCTAAAGTCTTTTAGCATGTGTCCTTGGTACCAGA  800

seq1  AGTGTGGGGTATTCCTGTGACAACCTGGCCATGCTTTGGGGAGGACTGTG  850
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGTGTGGGGTATTCCTGTGAC-ACCTGGCCATGCTTTGGGGAGGACTGTG  849

seq1  GAAGGACTTTGGAACTTTGAGCT-ACAAGATCCATTCGGTGTTAAGAGCT  899
      ||||||||||||||||||||||| ||||||||||||| ||||||||||||
seq2  GAAGGACTTTGGAACTTTGAGCTAACAAGATCCATTCCGTGTTAAGAGCT  899

seq1  CTGTCAGATGTTGTGTAGGAGCTTGGAAGATAATGTTGAAAACAATGCAG  949
      |||||||||||||||||||||||||||||||||||||||||   ||||||
seq2  CTGTCAGATGTTGTGTAGGAGCTTGGAAGATAATGTTGAAA--CATGCAG  947

seq1  AAGATGGAGG-CCTGGCTTGTGAAGTTTCAGAGGGAAAATTAAAGTCTC-  997
      |||||||||| ||| || ||||| ||||||||||||||||| ||||||| 
seq2  AAGATGGAGGTCCTTGCCTGTGAGGTTTCAGAGGGAAAATT-AAGTCTCT  996

seq1  TTTGCAGGGCCATTGCTACTTTGGTTGTGAAGATTCTGTGGTTCTGGTTA  1047
      |||||| || |||||||||||||| |||| ||||||||  | ||||||||
seq2  TTTGCA-GGACATTGCTACTTTGGGTGTG-AGATTCTGGTGGTCTGGTTA  1044

seq1  GCTGGGGCTGAAGAATCAGCTGTGA-TTAACAAGATACCAGAACTACTAA  1096
      ||| ||||||||||||||||||||| ||||||||||| ||| |||||| |
seq2  GCT-GGGCTGAAGAATCAGCTGTGATTTAACAAGATA-CAGGACTACT-A  1091

seq1  AGCAAAAACTTTGCATTACTGGGACTATTGATGCTGGTTAGCTG  1140
      |||||||   ||||| |||| |||||||||||||||| ||||||
seq2  AGCAAAA--CTTGCA-TACT-GGACTATTGATGCTGG-TAGCTG  1130