BAC Information

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BAC

Clone NameB6Ng01-217I24
Chromosome7 (Build37)
Map Location 144,798,074 - 144,976,215
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC546009, EG621677, EG668771, Mgmt, EG621804, Ebf3, 9430038I01Rik, Txnl2
Downstream geneLOC435235, Tcerg1l, LOC100043290
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-217I24.bB6Ng01-217I24.g
ACCGA033939GA033940
length1,057668
definitionB6Ng01-217I24.b B6Ng01-217I24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(144,975,178 - 144,976,215)(144,798,074 - 144,798,738)
sequence
gaattccatagagagatgttgttcttttgagagaatctttttacattaga
aatttaggtgagacatcctgccaactaaacgagatgcctccctcatataa
attcattgataaaagcagaggatgtatagacatttgatgaaacaagggat
gccttagagtagacccgaatcctcttagatgtgtcacagaggcacagaga
tggaggcagtggacaggaacatctcagtgtcccaccatctatctgcacat
gggacactgaggcccactgtaagttgacacagttctgggaatacctggca
agatggttgccaaagtccagcctgatgaccctgtactcctggttcaagag
cagagtctgtagggaccagaaaggccaccagagggcagcagatgtatcac
aaggagctggctcagatataccttgacttggggaggggtatccctagaag
ttcccccaattgagtctcttactgtttttcttttccctgcagaaactaca
tattgaactttttttgaaaaggaaaagaaaggaggtcttagaagaaatgg
acagaaagtctagcacatcccaggaaagggacgcttgcctcccctacatg
aaaacctctgaaccaacctttctacaaactttaatttctcagctcacttg
tgtgataaacaataaattacaggcaatggtctcaaaatctttcctgcctt
aaaaatatctccccacaactatgctgctccataaattaaaaatacaacat
agctggtactgtgacatgttcatgggttttcttccggggtagctaccggt
tcctcatccctttggcacaggacctcatggccaagagccaggctttgtcc
caacagaccctctatgcctcccatcagcgacacaggtgagtacccaactg
atcccagcaacccagttgagctgttggggcaccccagaatctccctccta
cttctgaagttcaggagcatgtggctttataaagtaatgtgtagcactgt
gaaccatatcaccgtttatccttccaagggaaattcaggattgaaattta
atgctgc
gaattccaggaatagcaaagtcctggagaacctcatgggctctaggaaag
aaatgggggcttctgtctcccagatatgtcattaatgccttttatcacac
taacagtccgatcacatctctcctgctctgtttttctttgattgttgaaa
tgaagctttgatcctgtttctcagttatcactgaaggagttcctggacct
ctactgccggaaggtagattccttcaaagagtcctgattttgtggcaggt
tctaaaaccacgtgctaggagtaggagccctgcccctgggcagcctcagc
tctgtctctgagtgcttggttggagcttgtgacagggatgaaggtgggac
tccctgtgcttgtttctgcagtttgctcaatagcaattctaatatatagg
ggtagtgaggggctgacatcagctcaattcagatgccatccatctgggac
agctcagagccttggtggagagtaaggtcctgtaacaagggcattgctgc
aaatgaggccattggccccacagatttctgcgttttggctgtcgatttca
gggttttccaacccctcctactttatgggagcttctctagaacaaagctt
cttttagaaaaatgctttttaaactggtttaccagtctttaaaggcaact
aagtatgtgtatgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_144975178_144976215
seq2: B6Ng01-217I24.b_46_1102 (reverse)

seq1  GCAGCATT-AATTTCCATACTG-ATTTCCCTTGGAA-GATAA--CGTGAT  45
      |||||||| |||||| || ||| ||||||||||||| |||||   |||||
seq2  GCAGCATTAAATTTCAATCCTGAATTTCCCTTGGAAGGATAAACGGTGAT  50

seq1  ATGG-TCACAGTGCTACACAT--CTTTATAAA-CCACA-GCT-CTGAACT  89
      |||| ||||||||||||||||  ||||||||| ||||| ||| |||||||
seq2  ATGGTTCACAGTGCTACACATTACTTTATAAAGCCACATGCTCCTGAACT  100

seq1  TCAGAAGTAAGA-GGAGA-TCT-GGGTGCCCC-ACAGCTC-ACTGGGTTG  134
      ||||||||| || ||||| ||| ||||||||| ||||||| |||||||||
seq2  TCAGAAGTAGGAGGGAGATTCTGGGGTGCCCCAACAGCTCAACTGGGTTG  150

seq1  CTGGGATCAG-TGGGTACTCACCTGTGTCGCCTGAT-GGAGGCATAGAGG  182
      |||||||||| ||||||||||||||||||| ||||| |||||||||||||
seq2  CTGGGATCAGTTGGGTACTCACCTGTGTCG-CTGATGGGAGGCATAGAGG  199

seq1  GTCTGTTGGGACAAAGCCTGGCTCTTGGCCATGAGGTCCTGTGCCAAAGG  232
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTTGGGACAAAGCCTGGCTCTTGGCCATGAGGTCCTGTGCCAAAGG  249

seq1  GATGAGGAACCGGTAGCTACCCCGGAAGAAAA-CCATGAACATGTCACAG  281
      |||||||||||||||||||||||||||||||| |||||||||||||||||
seq2  GATGAGGAACCGGTAGCTACCCCGGAAGAAAACCCATGAACATGTCACAG  299

seq1  TACCAGCTATGTTGTATTTTTAATTTATGGAGCAGCATAGTTGTGGGGAG  331
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAGCTATGTTGTATTTTTAATTTATGGAGCAGCATAGTTGTGGGGAG  349

seq1  ATA-TTTTAAGGCAGGAAAGATTTTGAGACCATTGCCTGTAATTTATTGT  380
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTTTAAGGCAGGAAAGATTTTGAGACCATTGCCTGTAATTTATTGT  399

seq1  TTATCACACAAGTGAGCTGAGAAATTAAAGTTTGTAGAAAGGTTGGTTCA  430
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCACACAAGTGAGCTGAGAAATTAAAGTTTGTAGAAAGGTTGGTTCA  449

seq1  GAGGTTTTCATGTAGGGGAGGCAAGCGTCCCTTTCCTGGGATGTGCTAGA  480
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTTTCATGTAGGGGAGGCAAGCGTCCCTTTCCTGGGATGTGCTAGA  499

seq1  CTTTCTGTCCATTTCTTCTAAGACCTCCTTTCTTTTCCTTTTCAAAAAAA  530
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTGTCCATTTCTTCTAAGACCTCCTTTCTTTTCCTTTTCAAAAAAA  549

seq1  GTTCAATATGTAGTTTCTGCAGGGAAAAGAAAAACAGTAAGAGACTCAAT  580
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATATGTAGTTTCTGCAGGGAAAAGAAAAACAGTAAGAGACTCAAT  599

seq1  TGGGGGAACTTCTAGGGATACCCCTCCCCAAGTCAAGGTATATCTGAGCC  630
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGAACTTCTAGGGATACCCCTCCCCAAGTCAAGGTATATCTGAGCC  649

seq1  AGCTCCTTGTGATACATCTGCTGCCCTCTGGTGGCCTTTCTGGTCCCTAC  680
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCCTTGTGATACATCTGCTGCCCTCTGGTGGCCTTTCTGGTCCCTAC  699

seq1  AGACTCTGCTCTTGAACCAGGAGTACAGGGTCATCAGGCTGGACTTTGGC  730
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTGCTCTTGAACCAGGAGTACAGGGTCATCAGGCTGGACTTTGGC  749

seq1  AACCATCTTGCCAGGTATTCCCAGAACTGTGTCAACTTACAGTGGGCCTC  780
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATCTTGCCAGGTATTCCCAGAACTGTGTCAACTTACAGTGGGCCTC  799

seq1  AGTGTCCCATGTGCAGATAGATGGTGGGACACTGAGATGTTCCTGTCCAC  830
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCCATGTGCAGATAGATGGTGGGACACTGAGATGTTCCTGTCCAC  849

seq1  TGCCTCCATCTCTGTGCCTCTGTGACACATCTAAGAGGATTCGGGTCTAC  880
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCCATCTCTGTGCCTCTGTGACACATCTAAGAGGATTCGGGTCTAC  899

seq1  TCTAAGGCATCCCTTGTTTCATCAAATGTCTATACATCCTCTGCTTTTAT  930
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGGCATCCCTTGTTTCATCAAATGTCTATACATCCTCTGCTTTTAT  949

seq1  CAATGAATTTATATGAGGGAGGCATCTCGTTTAGTTGGCAGGATGTCTCA  980
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGAATTTATATGAGGGAGGCATCTCGTTTAGTTGGCAGGATGTCTCA  999

seq1  CCTAAATTTCTAATGTAAAAAGATTCTCTCAAAAGAACAACATCTCTCTA  1030
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAAATTTCTAATGTAAAAAGATTCTCTCAAAAGAACAACATCTCTCTA  1049

seq1  TGGAATTC  1038
      ||||||||
seq2  TGGAATTC  1057

seq1: chr7_144798074_144798738
seq2: B6Ng01-217I24.g_73_740

seq1  GAATTCCAGGAATAGCAAAGTCCTGGAGAACCTCATGGGCTCTAGGAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAATAGCAAAGTCCTGGAGAACCTCATGGGCTCTAGGAAAG  50

seq1  AAATGGGGGCTTCTGTCTCCCAGATATGTCATTAATGCCTTTTATCACAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGGGGGCTTCTGTCTCCCAGATATGTCATTAATGCCTTTTATCACAC  100

seq1  TAACAGTCCGATCACATCTCTCCTGCTCTGTTTTTCTTTGATTGTTGAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACAGTCCGATCACATCTCTCCTGCTCTGTTTTTCTTTGATTGTTGAAA  150

seq1  TGAAGCTTTGATCCTGTTTCTCAGTTATCACTGAAGGAGTTCCTGGACCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTTTGATCCTGTTTCTCAGTTATCACTGAAGGAGTTCCTGGACCT  200

seq1  CTACTGCCGGAAGGTAGATTCCTTCAAAGAGTCCTGATTTTGTGGCAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCCGGAAGGTAGATTCCTTCAAAGAGTCCTGATTTTGTGGCAGGT  250

seq1  TCTAAAACCACGTGCTAGGAGTAGGAGCCCTGCCCCTGGGCAGCCTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAAACCACGTGCTAGGAGTAGGAGCCCTGCCCCTGGGCAGCCTCAGC  300

seq1  TCTGTCTCTGAGTGCTTGGTTGGAGCTTGTGACAGGGATGAAGGTGGGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTCTGAGTGCTTGGTTGGAGCTTGTGACAGGGATGAAGGTGGGAC  350

seq1  TCCCTGTGCTTGTTTCTGCAGTTTGCTCAATAGCAATTCTAATATATAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTGTGCTTGTTTCTGCAGTTTGCTCAATAGCAATTCTAATATATAGG  400

seq1  GGTAGTGAGGGGCTGACATCAGCTCAATTCAGATGCCATCCATCTGGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAGTGAGGGGCTGACATCAGCTCAATTCAGATGCCATCCATCTGGGAC  450

seq1  AGCTCAGAGCCTTGGTGGAGAGTAAGGTCCTGTAACAAGGGCATTGCTGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGAGCCTTGGTGGAGAGTAAGGTCCTGTAACAAGGGCATTGCTGC  500

seq1  AAATGAGGCCATTGGCCCCACAGATTTCTGCGTTTTGGCTGTCGATTTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGGCCATTGGCCCCACAGATTTCTGCGTTTTGGCTGTCGATTTCA  550

seq1  GGG-TTTCCAACCCCTCCTACTTTATGGGAGCTTCTCTAGAACAAAGCTT  599
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTTCCAACCCCTCCTACTTTATGGGAGCTTCTCTAGAACAAAGCTT  600

seq1  C-TTTAGAAAAATGCTTTTTAAACTGGTTTACCAGTCTTT-AAGGCAACT  647
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CTTTTAGAAAAATGCTTTTTAAACTGGTTTACCAGTCTTTAAAGGCAACT  650

seq1  AAGTATGTGTATGTGTGT  665
      ||||||||||||||||||
seq2  AAGTATGTGTATGTGTGT  668