BAC Information

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BAC

Clone NameB6Ng01-218E20
Chromosome7 (Build37)
Map Location 30,828,619 - 30,829,764
singlet/doubletsinglet
Overlap geneZfp14
Upstream geneRyr1, Rasgrp4, 1110006G06Rik, Spred3, Ggn, Psmd8, A230107C01Rik, Kcnk6, Yif1b, Spint2, Ppp1r14a, Neud4, Sipa1l3, LOC100043791, 4932431P20Rik, 4930432E11Rik, 1700067C01Rik, Zfp84, LOC100043794, Zfp30, EG625349, 6330581L23Rik, BC027344, Zfp420, Zfp27, Zfp74, LOC625437, LOC100043796, Zfp568
Downstream geneLOC100043798, Zfp82, Zfp566, Zfp260, Zfp382, Zfp146, EG330503, Cox7a1, Capns1, Tbcb, Polr2i, Ovol3, Wdr62, EG668354, 1700020L13Rik, Clip3, Alkbh6, AI428936, 0610010E21Rik, Lrfn3, Tyrobp, Hcst, AY078069, Aplp1, Kirrel2, Nphs1, LOC100034728, Prodh2, Gm1082, Snx26, BC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-218E20.bB6Ng01-218E20.g
ACCGA034467GA034468
length1,1611,048
definitionB6Ng01-218E20.b B6Ng01-218E20.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccactcctcctgagagaaatccacagccacatccccaaacgtca
ctaaaccctgaaaaacaaacaaacaaacaaacaaacctgtggtcctgcat
gaaaaaattccttttttatttaaggggagagtggaggaggaccacacagc
cccactgtgaagtgggaagcctacagaacataagcagctgaacaggacaa
cagggacagagacagcaagggactccgtgtctcagcagcagagtggtgga
tgatatgctaccatacggccctgcacacgcacacaaatcaaacctttaaa
ataaatgtgtatttcatatgtgtgtgcacacacatgcataccatagcaca
agtatgcaggtcagaggacaacccacaacggttccttctgccatgtcaga
tcctcgttgctgccttctaagctatcttgctgcccaagattagatttttt
ttcattcattctggaaatgaatatgatgtgacacacaaatgaacccaact
gcacagcagttatatgctatatacacaatgtgtttccattataatttcta
cagaaacatggtatttagttttattaagttcaaaacagaaaaccaatgtc
ctttgacttctacttgtgtaccacagtacacacacacacacacacacaca
cacacacacacacacacacacacacacacagaggggaggaaataatattc
tctgaaaaaaatctgtaattattaaaccaaaaagatgtcccatatggaaa
cagtaagagaggaacattctgcagagcacatctgagagtttctcatgggt
tttacctgggctcgatttccatggctctaaaagaaaacaacgtgcaggag
gtgggggaggctcagcccttggaggcagcatgcccagccctgggctctgt
ctcagcactggggagggttgctgcacagagctcgctagaggagcaggttc
agggaaaaggagtgaccgtatgtgttcaaccgtctggaaacccgagtgct
tcagaggtaaataggtaccatgtgatccgtgtaccgtgcaccacttgccg
ttccagccctcaagaagcagacaggaggtcaatacaatcaagaacttagt
cttgggggaataagaagaaaaatccttaacctaacctgaagccaggcaat
agtgttagaac
ttcttgaagggcggcggtggcggtgggggaggcgggggtctgggcggggg
cctggggaatgtgctcggaggcctgatcagcggagctgctggcggcggcg
gcggtggcggtggaggcatgggactgggaggaggtggcggaggcggtgga
actgccatgcgcatcctgggcggagtcattagcgccatcaggtaaggcgg
ggcctgaaggggcggggcgggccaaataataaagactcacttagagtccg
acctgagaattcttaattagtctgggctgatccataccggaaaactggcc
ctaaggggattctagcgaggctggtgtcactttttagtaccaggattagt
aaacctgcttctgtgggtcaacaaataggatgcagtttcttggggatagg
ggctcttctgtgtttggggaaggtgcaattctataggagtgtatccagcc
ttcactgggggcgcagccagtggatctaaggctgtccatggcttaagatt
tgagcgaggtggagcttgctgttttaggagagatcatagtccccaaagaa
taaatggtccatacaaagttgtgtggggtctggagctgattgattctgtg
ggaaatatttctttgatggaattacatcattatgtctggcacctatatat
atcctcgatctgaaatctgttacctgcgaaggctgggagactcaatttgg
gaaacattcaatttatatatatgaagtatagtttttttgagcatttaact
ttaatttcccattgtctaaactcagtactgcataccttcatatttgattt
taattttcatgataatatcccaaattggcacctctaaaatactttttata
cactctgggcaatatattcttttcatctactattgccttaggagcttgtg
gagggggctggtcatgaccctggcaacttatttaggaacaagggtccttt
aatgtgactcctctcctacaaagcgactttgcctgcccatgacagaagac
ctggtcgcgtggtcatggtgagggaggatttcacgtgtatcctctcta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_30828619_30829764
seq2: B6Ng01-218E20.b_40_1200

seq1  GAATTCCCACTCCTCCTGAGAGAAATCCACAGCCACATCCCCAAACGTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCACTCCTCCTGAGAGAAATCCACAGCCACATCCCCAAACGTCA  50

seq1  CTAAACCCTGAAAAACAAACAAACAAACAAACAAACCTGTGGTCCTGCAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAACCCTGAAAAACAAACAAACAAACAAACAAACCTGTGGTCCTGCAT  100

seq1  GAAAAAATTCCTTTTTTATTTAAGGGGAGAGTGGAGGAGGACCACACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATTCCTTTTTTATTTAAGGGGAGAGTGGAGGAGGACCACACAGC  150

seq1  CCCACTGTGAAGTGGGAAGCCTACAGAACATAAGCAGCTGAACAGGACAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTGTGAAGTGGGAAGCCTACAGAACATAAGCAGCTGAACAGGACAA  200

seq1  CAGGGACAGAGACAGCAAGGGACTCCGTGTCTCAGCAGCAGAGTGGTGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGACAGAGACAGCAAGGGACTCCGTGTCTCAGCAGCAGAGTGGTGGA  250

seq1  TGATATGCTACCATACGGCCCTGCACACGCACACAAATCAAACCTTTAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGCTACCATACGGCCCTGCACACGCACACAAATCAAACCTTTAAA  300

seq1  ATAAATGTGTATTTCATATGTGTGTGCACACACATGCATACCATAGCACA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATGTGTATTTCATATGTGTGTGCACACACATGCATACCATAGCACA  350

seq1  AGTATGCAGGTCAGAGGACAACCCACAACGGTTCCTTCTGCCATGTCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATGCAGGTCAGAGGACAACCCACAACGGTTCCTTCTGCCATGTCAGA  400

seq1  TCCTCGTTGCTGCCTTCTAAGCTATCTTGCTGCCCAAGATTAGATTTTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCGTTGCTGCCTTCTAAGCTATCTTGCTGCCCAAGATTAGATTTTTT  450

seq1  TTCATTCATTCTGGAAATGAATATGATGTGACACACAAATGAACCCAACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCATTCTGGAAATGAATATGATGTGACACACAAATGAACCCAACT  500

seq1  GCACAGCAGTTATATGCTATATACACAATGTGTTTCCATTATAATTTCTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACAGCAGTTATATGCTATATACACAATGTGTTTCCATTATAATTTCTA  550

seq1  CAGAAACATGGTATTTAGTTTTATTAAGTTCAAAACAGAAAACCAATGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAACATGGTATTTAGTTTTATTAAGTTCAAAACAGAAAACCAATGTC  600

seq1  CTTTGACTTCTACTTGTGTACCACAGTACACACACACACACACACACACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGACTTCTACTTGTGTACCACAGTACACACACACACACACACACACA  650

seq1  CACACACACACACACACACACACACACACAGAGGGGAGGAAATAATATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACAGAGGGGAGGAAATAATATTC  700

seq1  TCTGAAAAAAATCTGTAATTATTAAACCAAAAAGATGTCCCATATGGAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGAAAAAAATCTGTAATTATTAAACCAAAAAGATGTCCCATATGGAAA  750

seq1  CAGTAAGAGAGGAACATTCTGCAGAGCACATCTGAGAGTTTCTCATGGGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAAGAGAGGAACATTCTGCAGAGCACATCTGAGAGTTTCTCATGGGT  800

seq1  TTTACCTGGGCTCGATTTCCATGGCTCTAAAAG-AAACAACGTGCAGGAG  849
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTACCTGGGCTCGATTTCCATGGCTCTAAAAGAAAACAACGTGCAGGAG  850

seq1  GTGGGGGAGGCTCAG-CCTTGGAGGCAGCATGCCCAGCCCTGGGCTCTGT  898
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  GTGGGGGAGGCTCAGCCCTTGGAGGCAGCATGCCCAGCCCTGGGCTCTGT  900

seq1  CTCAGCACTGGGGAGGG-TGCTGCACAGAGCTCGCTAGAGGAGCAGGTTC  947
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  CTCAGCACTGGGGAGGGTTGCTGCACAGAGCTCGCTAGAGGAGCAGGTTC  950

seq1  AGGG-AAAGGAGTGACCGTATGTGTTCAACCGTCTGGAAA-CCGAGTGCT  995
      |||| ||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGGGAAAAGGAGTGACCGTATGTGTTCAACCGTCTGGAAACCCGAGTGCT  1000

seq1  TCAGAGG-AAATAGGTACCATGTGATCCGTGTACCGTGCA-CACTTGCGG  1043
      ||||||| |||||||||||||||||||||||||||||||| ||||||| |
seq2  TCAGAGGTAAATAGGTACCATGTGATCCGTGTACCGTGCACCACTTGCCG  1050

seq1  TTCCAGCCCTCAGGAGGCAGACAGGAGGTC-ATAC-ATCAAGA--CTAGT  1089
      |||||||||||| || |||||||||||||| |||| |||||||   ||||
seq2  TTCCAGCCCTCAAGAAGCAGACAGGAGGTCAATACAATCAAGAACTTAGT  1100

seq1  CTTGGGGGAAT-AGA--GAAAATCCTTAACCT-ACCTG-AGCCAGGGCCA  1134
      ||||||||||| |||   |||||||||||||| ||||| ||||| ||| |
seq2  CTTGGGGGAATAAGAAGAAAAATCCTTAACCTAACCTGAAGCCA-GGCAA  1149

seq1  TAGTGTTAGAAC  1146
      ||||||||||||
seq2  TAGTGTTAGAAC  1161