BAC Information

Click to search

BAC

Clone NameB6Ng01-219B24
Chromosome7 (Build37)
Map Location 48,265,872 - 48,266,393
singlet/doubletsinglet
Overlap genenone
Upstream geneEG628161, LOC100039094, 2900093B09Rik, 4930433I11Rik
Downstream geneEG233164, LOC668555, EG627987, LOC100039269, LOC545955, EG628304, LOC668561, EG434172, LOC100039221, LOC668565, AI987944, EG269902, LOC100039375, EG628359, 2610021A01Rik, 2810426N06Rik, LOC668576, Gprc2a-rs5, LOC628372, EG668579, EG628403, EG628422, Gprc2a-rs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219B24.bB6Ng01-219B24.g
ACCGA035061GA035062
length1,034817
definitionB6Ng01-219B24.b B6Ng01-219B24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcacactaggcattgagtctttgtcaggatgtctaggatggtac
ccttacagacttggggcagggttctttgcccccaacccttgaattgaacc
ctaagtagattacttcagttatgcaaatctgtgttctttccgttgagact
ctatatcccaatcatagcgtaatttttaagaggactttagttgccttcat
gtgagagtctgtatcagtggcagccagaaaaaaatcatttacatattgaa
gtaaatatggggcatggcctgtcaatactcacataagtcctgatggagag
ctttgtcaaagatggtgggcaagttcttaaatccttgcagaagtcttgtc
cagattagctgtacagtgaacctgttttccatatcttgctacttgaaggt
gaaaagtggttggctgttttatctaggggaatattaaagaaggtgccatt
taattccaagtctttgtaaatttgcctgttgggtggtgtattagtcaggg
ttctctagagtcacagaacttaggatagtctctagatagtaaaggaattt
attgatgacttacagtcggcagcccaattcccaacaatggttcagtcgca
gctgtgaatggaagtccaaggatctagcagttactcagtctcacgcagca
agcaggcgaaggagcaagagcaagagctagactcccttcttccaatgtcc
ttatattgtctccagaaggtgtcgcccagattaaaggtgtgttccaccac
acctttaatcccagatgaaaggtgtagcccagattaaaggtgtgttcctt
aaactcggagattcaatcttctggaatccatagccactatggcctcaaga
tctccaaaccaagatccagataaggatctccaagccctccagataagggt
cactggtgagccttccaattctggattgtagttcattccaaatatagtca
agttgacaaccaggaatagccactacaggtggtaaggaactcagaagtga
acagggattcaggactgttggatgatgtctctac
gaattctctgtttagttctataccccatttttttattgggttgtttggtt
ttttggagggattagattcttgaattctttatatattttgaatattaacc
ctctatcagatatgagaatagtgaagattttcccccaatctataagttgc
caatttgtcctattaactatgtcctttgcctcacagaagcaatcagtatc
atgatttcccatgtatcaattcttgatcttagagcatgagccattggagt
tgtgtctaggaaatttcccactgtgccaatgactttgagcttctttccca
cttcctcttttattagattcagtgtatctggttttatgttgaggtccttg
atccttggacttcagctttgtacaaggtgacaaatatggctctattttta
tttttctgcataccaactgccagttatatgagcaccatttatttaagatg
ctttctttttacaattgtatttttttgctttttttcaaagatcaagtgtc
cataggtgtgtagttttatttctgagtctttcaattctcttttcttgatc
aacctgcctgtctctgtaccaataccattcaatttttatcactatttctc
tgtagcacatcttgaggtcaggaagggtgattaccttagaagttctttaa
ttgttttcaaaatcatgattttttttattttttccatatgaaattgagaa
ttggtctttccatgcctttgaagagtcgtgttgggattttgatgggggat
tgttgtagaatctgtagattgcttttgggagtaagttcattttttaccta
tgttaatccctagcaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_48265872_48266393
seq2: B6Ng01-219B24.b_54_532

seq1  TCACACTAGGCATTGAGTCTTTGTCAGGATGCCTAGGATGGTACCCTTAC  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCACACTAGGCATTGAGTCTTTGTCAGGATGTCTAGGATGGTACCCTTAC  50

seq1  AGACTTGGGACAGGGTTCTTTGCCCCCAACCCTTGAATTGAACCCTAAGT  100
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGGGGCAGGGTTCTTTGCCCCCAACCCTTGAATTGAACCCTAAGT  100

seq1  ACATTACTTCAGTTATGCAAATCTGTGTCCTTTCAATTGAGACTCTATAC  150
      | |||||||||||||||||||||||||| |||||  ||||||||||||| 
seq2  AGATTACTTCAGTTATGCAAATCTGTGTTCTTTCCGTTGAGACTCTATAT  150

seq1  CCCAATCATTGTGTAATTTTTAAGAGGACTTTAGTTGCCTTCATGTGAGA  200
      ||||||||| | ||||||||||||||||||||||||||||||||||||||
seq2  CCCAATCATAGCGTAATTTTTAAGAGGACTTTAGTTGCCTTCATGTGAGA  200

seq1  GTCTGTATCAGTGGCAGCCAGAAATAAATCATTTACATATTGAAGTAAAT  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTCTGTATCAGTGGCAGCCAGAAAAAAATCATTTACATATTGAAGTAAAT  250

seq1  ATGTGGCATGGCCTGTCAATACTCACATAAGTCCTGAAGGAGAGCCTTGT  300
      ||| ||||||||||||||||||||||||||||||||| ||||||| ||||
seq2  ATGGGGCATGGCCTGTCAATACTCACATAAGTCCTGATGGAGAGCTTTGT  300

seq1  CAAATATGGTGGGCAAGTTCTTAAATCCTTGCAGAAGTCTTGTTCAGCTT  350
      |||| |||||||||||||||||||||||||||||||||||||| ||| ||
seq2  CAAAGATGGTGGGCAAGTTCTTAAATCCTTGCAGAAGTCTTGTCCAGATT  350

seq1  AACTGTACACTGAACCTGTTTTCCAGATCTTGCTACTTGAAGGTGAAAAG  400
      | ||||||| ||||||||||||||| ||||||||||||||||||||||||
seq2  AGCTGTACAGTGAACCTGTTTTCCATATCTTGCTACTTGAAGGTGAAAAG  400

seq1  TGGCTGGCTGTTTTATCTAGGGGAATATTAAAGAAGGTGCCATTTAAGCC  450
      ||| |||||||||||||||||||||||||||||||||||||||||||  |
seq2  TGGTTGGCTGTTTTATCTAGGGGAATATTAAAGAAGGTGCCATTTAATTC  450

seq1  CAAGTCTTTGTAAATTTGCCTATTGGGTGGTAAGGAACTCAGAAGTGTAT  500
      ||||||||||||||||||||| |||||||                     
seq2  CAAGTCTTTGTAAATTTGCCTGTTGGGTG---------------------  479

seq1  ATGGATTCAGGACTGTTGGGTG  522
                            
seq2  ----------------------  479