BAC Information

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BAC

Clone NameB6Ng01-221E06
Chromosome7 (Build37)
Map Location 9,154,858 - 9,155,922
singlet/doubletsinglet
Overlap geneEG545909
Upstream geneLOC100042688, LOC100042695, LOC100041956, LOC100041961, LOC100042703, LOC100041967, LOC100042724, LOC100041977, LOC100041983, LOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145
Downstream geneLOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593, EG665582, EG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-221E06.bB6Ng01-221E06.g
ACCGA036603GA036604
length9481,059
definitionB6Ng01-221E06.b B6Ng01-221E06.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttcacgaatttattcttttttaattttttatttttttaattaga
tattttctttatttgcatttcaaatgctatcccaaaagtcccctgtcccc
tcccccaccctgctccccaacccatccactcctgcttcctgaccctggca
ttttcctctactagggaatataatcttcataagaccaagagcttctcctc
ccaatgatggttgagtagcccatcttctgctaaatatgcagctaaagaca
tgagctctgcaggtactggttagttcatacagttgttcctcctatagagt
tgcagacccatttagttccttgggtacattctctagctcctccattggga
gccctatgttccatccaatagatgacactgagcatccacttctggatttg
ccaggcactggtagagcctcacaagagacaactatatcagggtcctgtca
gaaactgttgctagcataggcaatagtgtcttattaaaatttactatctt
atatgatatacataaatatttaatataaaaattatataaatatatacttc
tataattatataattataatatataatatataaaattataatatacaaat
aatataaaatatatattaatgtataaagtcatatatacaatatatatata
tactaaagtcttatatactatatatacacatttaatataaaaataatatg
aatatataattacataatatataatatgtaccctattttaaagtatgata
tagaaataatataaatatataatattaatatatagtgtaaaatatataaa
tatatgttttatatatatataaatagtgtcttataaaaccataaaaaaac
actaaaacttgtagtggagaatgtggggaataacctcgagatatgggttc
aggggaataattcctgaccagaacaagccgtgggctaatgcctgtaca
gaattctcattgacatataacttgattttgtccaaggaattccgtttgga
gtttgacattaatagtttataggagcatcttattatgtttatcacatgta
aatatggaataaataactggcattaataattccatatgttctgattatag
aatttacaatttaaagtatagtgttcttagtactaaacctggaataaata
tcactgaattgtctatcactaactcatgctttactcactactattcatat
gaggtatgaggtcggatttcctggtcttttcacctagtatcgtttcatac
aactacttaccataatgtatatgcaaattttgtcctattatgatggctta
gattttgtttaatcttgttttattttagtattctcctatagaatcctgtt
attttctaatgagtgacagaaagtggatctgatggaaaaggcagttggga
agtaaatagcaatattaactaagatatatttgccagcaaagctgacagtt
ggtcacattccaatagaagggagtgaaactgtaattaggatatattatgt
gaggataacaatttttttcaaaaaataaaacaatcacaatttcaaaaaaa
ttctctctgttctcagagaatgatctttctgttgtgtgttgtgttctttt
gttacgtgtttttgtcaagtattattccatacatatgtatcaaattcttg
aattacctttttcccccttattaaacattataatgtttttctccagtttt
ttaagaaagaaaagttctttctcttgtatatgaatgtgtcttcctaccct
ctgcaggcaacttaggaatgccttaaaaaattaaatcagcctcgttgacc
ttgatttcatttagagaacattaacaaaattgttcagttataacagaaaa
ttatttgttgctttgctaagtgctgttttttcggaatttgaaggtgtgta
atagccatttgttgttgttgctctagtgctgtcaataagcttctttgacc
ttcggttcatctacttactaagtgtgaaggaattctccatataataaaac
tgctgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9154858_9155922
seq2: B6Ng01-221E06.g_65_1123 (reverse)

seq1  AGAACAGCACTTTTTAATAATATGGAAGAATCCCTTCACACTTAGTAAGT  50
      ||||||||| ||||  || |||||| ||||| ||||||||||||||||||
seq2  AGAACAGCAGTTTT--ATTATATGG-AGAATTCCTTCACACTTAGTAAGT  47

seq1  AAGATGAACAGAAGGTCAAAGGAGCCTATAGACAGCACTAGAGCAACAAA  100
       |||||||| ||||||||||| ||| ||| ||||||||||||||||||| 
seq2  -AGATGAACCGAAGGTCAAAGAAGCTTATTGACAGCACTAGAGCAACAA-  95

seq1  CAAACAAATGACTATTAACACACC-TCAAATACAGAAAAAACAGCAACTA  149
        |||||||| ||||| ||||||| |||||| | ||||||||||| ||| 
seq2  -CAACAAATGGCTATT-ACACACCTTCAAATTCCGAAAAAACAGC-ACTT  142

seq1  AGCAAAAGCAACAAATAATTTTCTGTTATAACTGAACAATTTTGTTAATG  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGC-AAAGCAACAAATAATTTTCTGTTATAACTGAACAATTTTGTTAATG  191

seq1  TTCTCTAAATGAAATCAAGGTCAACGAGGCTGATTT-ATTTTTTAAGGCA  248
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TTCTCTAAATGAAATCAAGGTCAACGAGGCTGATTTAATTTTTTAAGGCA  241

seq1  TTCCTAAGTTGCCTGCAGAGGGTAGGAAGACACATTCATATACAAGAG-A  297
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTCCTAAGTTGCCTGCAGAGGGTAGGAAGACACATTCATATACAAGAGAA  291

seq1  AGAACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAATA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACTTTTCTTTCTTAAAAAACTGGAGAAAAACATTATAATGTTTAATA  341

seq1  AGGGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATAC  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGGAAAAAGGTAATTCAAGAATTTGATACATATGTATGGAATAATAC  391

seq1  TTGACAAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAAAAACACGTAACAAAAGAACACAACACACAACAGAAAGATCATT  441

seq1  CTCTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTTTG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGAGAACAGAGAGAATTTTTTTGAAATTGTGATTGTTTTATTTTTTG  491

seq1  AAAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACTCCC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATTGTTATCCTCACATAATATATCCTAATTACAGTTTCACTCCC  541

seq1  TTCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCTTAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATTGGAATGTGACCAACTGTCAGCTTTGCTGGCAAATATATCTTAG  591

seq1  TTAATATTGCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATATTGCTATTTACTTCCCAACTGCCTTTTCCATCAGATCCACTTTC  641

seq1  TGTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAATAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTCATTAGAAAATAACAGGATTCTATAGGAGAATACTAAAATAAA  691

seq1  ACAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCATAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTAAACAAAATCTAAGCCATCATAATAGGACAAAATTTGCATAT  741

seq1  ACATTATGGTAAGTAGTTGTATGAAACGATACTAGGTGAAAAGACCAGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTATGGTAAGTAGTTGTATGAAACGATACTAGGTGAAAAGACCAGGA  791

seq1  AATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGTTAG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCGACCTCATACCTCATATGAATAGTAGTGAGTAAAGCATGAGTTAG  841

seq1  TGATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACACTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAGACAATTCAGTGATATTTATTCCAGGTTTAGTACTAAGAACACTA  891

seq1  TACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAATGCC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTAAATTGTAAATTCTATAATCAGAACATATGGAATTATTAATGCC  941

seq1  AGTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGCTCCTAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATTTATTCCATATTTACATGTGATAAACATAATAAGATGCTCCTAT  991

seq1  AAACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAAGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTATTAATGTCAAACTCCAAACGGAATTCCTTGGACAAAATCAAGTT  1041

seq1  ATATGTCAATGAGAATTC  1065
      ||||||||||||||||||
seq2  ATATGTCAATGAGAATTC  1059