BAC Information

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BAC

Clone NameB6Ng01-223A17
Chromosome7 (Build37)
Map Location 67,004,419 - 67,005,283
singlet/doubletsinglet
Overlap genenone
Upstream geneAtp10a, LOC621446, LOC668811, LOC668813, LOC668815, EG668818, Ube3a, LOC100040985, LOC100041010, LOC100041029, LOC100041051, Pwcr1
Downstream geneLOC664788, Snrpn, Snurf, EG664849, LOC100041201, LOC100041211, LOC664896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223A17.bB6Ng01-223A17.g
ACCGA037896GA037897
length1,233866
definitionB6Ng01-223A17.b B6Ng01-223A17.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaaatgaatttgataggaattgaaaatcatcacagggtaatatt
ttatatttgtaatcccaacacttagaaggctaaatctccaaagagaacaa
gtacaccatggcagcttagagtgtgtctctgttgacataaacaacaaaga
aaccaaaatgatatgtttccattgacattttaagaaaaattgataacgtg
gggctagagatgtgaaatacccgttaagagcatatgttgcttttgcacag
aatgtaggttgtttttttttttttcccccagcatctatatgatagttcac
agtaacttgtaacaccaatcccaggatacctttatgctgttttatgtctt
ctgatataagcatatacattcttgcaaggagatactcatatacataaaat
agaagtaaattacaaatagcaaaacacaaagaggctggagagatgtttca
gcagacaagagcatgtgctgttttctggtttccatgggcactacaatcat
gtacagaagcatatagaaggacatatacatatgggcataaatttaaattt
tattattattctttaatcttttttacagtccagttgttatccaccacatg
gttcaccctccaaaacttccttattacattcctcctcccccatctccaag
aggatattcccaaacattcaatcccatcagatctccccactccctgagac
ctcaagtctctctaggattaggttcatctctcactgaggccagaccaggc
agtcctctgtattatatgtgttgggagcctcatatcagctagtgtgtgct
gtttggttggtggctcattttctgagagatattggggatcccaggttagt
tgagactgctggtcttcctatgggttttccctcatcctttagctttcttt
cagtctttattggattaaaccacagtgttacccaaatttctgtcccattg
gatgagtgttaaatatcagcatctgactcttttctgcatcctgttggacc
tcctcagagggctgccatgctagctcctgtctgtaagcataccatagcat
caataatagtctccctcttaactgcatcaatttgggaatggtcactggaa
cctcttttccctcagtctctcaataatttttgttcctacaggttctttag
acaggacatttctgtcagagttttgactgggtaatggcaacaccatatcc
ttagaacttgaggattgcccaggcgtcttcata
gaattcatgcagcaattcccatgttccttaccatttaactcaggtgacct
agggcaagtcagcaacaccacaacagttcgatggagactcagttggacga
cataaacactcagccaatgctgtggggccatttcctctgcatgttttcca
tggaccatactggaaagggaatgcaaccctgtgaagacaacacaaagaac
atgccccgattacagtgggaccaatgcaaaaccacatggattatgggctt
accatgtactatgggcttgtcatatctcacaggcaccctcaacactcctg
ctcttaccaacctcttcacactgcccttccagatctcacttgctgttact
ctcaggccttggatgtgaacatgccatgccctttgctctcaagtgcttgc
tgggtcctcagctcactctaaggacttaaggatgatatgtgagctgcaat
acaggtactcaacactttctcttaggtccatgccatcaacttcttccacc
agtgtcctgagcaaagtttcaagggaatgaaggctcttctccaagcatcc
agtcagaaaaagccaataacaagggcaatcataggtccccttgcctatgc
tgacgaagaaggaggcagctctgaataactccaccagcaatattgggcct
ccaaggatatctaagccaacaacttttgagccttcaatcatggctccagt
ccttctctgatcattacttctgggtctttgcatgaggtaaaaatcaagct
cctctgagagttcagaactccaggtcatgggaaggcaggcttcatttttc
acagctgaaaggaaccactctctctccctctctctgtgttagtgtgtgtg
tgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_67004419_67005283
seq2: B6Ng01-223A17.g_68_933

seq1  GAATTCATGCAGCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGCAGCAATTCCCATGTTCCTTACCATTTAACTCAGGTGACCT  50

seq1  AGGGCAAGTCAGCAACACCACAACAGTTCGATGGAGACTCAGTTGGACGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCAAGTCAGCAACACCACAACAGTTCGATGGAGACTCAGTTGGACGA  100

seq1  CATAAACACTCAGCCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAACACTCAGCCAATGCTGTGGGGCCATTTCCTCTGCATGTTTTCCA  150

seq1  TGGACCATACTGGAAAGGGAATGCAACCCTGTGAAGACAACACAAAGAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACCATACTGGAAAGGGAATGCAACCCTGTGAAGACAACACAAAGAAC  200

seq1  ATGCCCCGATTACAGTGGGACCAATGCAAAACCACATGGATTATGGGCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCCGATTACAGTGGGACCAATGCAAAACCACATGGATTATGGGCTT  250

seq1  ACCATGTACTATGGGCTTGTCATATCTCACAGGCACCCTCAACACTCCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTACTATGGGCTTGTCATATCTCACAGGCACCCTCAACACTCCTG  300

seq1  CTCTTACCAACCTCTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTACCAACCTCTTCACACTGCCCTTCCAGATCTCACTTGCTGTTACT  350

seq1  CTCAGGCCTTGGATGTGAACATGCCATGCCCTTTGCTCTCAAGTGCTTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCCTTGGATGTGAACATGCCATGCCCTTTGCTCTCAAGTGCTTGC  400

seq1  TGGGTCCTCAGCTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTCCTCAGCTCACTCTAAGGACTTAAGGATGATATGTGAGCTGCAAT  450

seq1  ACAGGTACTCAACACTTTCTCTTAGGTCCATGCCATCAACTTCTTCCACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTACTCAACACTTTCTCTTAGGTCCATGCCATCAACTTCTTCCACC  500

seq1  AGTGTCCTGAGCAAAGTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTCCTGAGCAAAGTTTCAAGGGAATGAAGGCTCTTCTCCAAGCATCC  550

seq1  AGTCAGAAAAAGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAGAAAAAGCCAATAACAAGGGCAATCATAGGTCCCCTTGCCTATGC  600

seq1  TGACGAAGAAGGAGGCAGCTCTGAATAACTCCACCAGCAATATTGGGCCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACGAAGAAGGAGGCAGCTCTGAATAACTCCACCAGCAATATTGGGCCT  650

seq1  CCAAGGATATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGATATCTAAGCCAACAACTTTTGAGCCTTCAATCATGGCTCCAGT  700

seq1  CCTTCTCTGATCATTACTTCTGGGTCTTTGCATGAGGT-AAAATCAAGCT  749
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  CCTTCTCTGATCATTACTTCTGGGTCTTTGCATGAGGTAAAAATCAAGCT  750

seq1  CCTCTGAGAGTTCAGAACTCCAGGTCATGGGAA-GCAGGCTTCA-TTTTC  797
      ||||||||||||||||||||||||||||||||| |||||||||| |||||
seq2  CCTCTGAGAGTTCAGAACTCCAGGTCATGGGAAGGCAGGCTTCATTTTTC  800

seq1  ACAGCTGAAAGGAACCCCCCTCTCTCTCCCTCTCTCTGTGTTAGTGTGTG  847
      ||||||||||||||  || |||||||||||||||||||||||||||||||
seq2  ACAGCTGAAAGGAA--CCACTCTCTCTCCCTCTCTCTGTGTTAGTGTGTG  848

seq1  TGTGTGTGTGTGTGTGTG  865
      ||||||||||||||||||
seq2  TGTGTGTGTGTGTGTGTG  866