BAC Information

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BAC

Clone NameB6Ng01-223E14
Chromosome7 (Build37)
Map Location 133,905,157 - 134,041,010
singlet/doubletdoublet
Overlap geneMapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa, 1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044
Downstream geneKctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp, 2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-223E14.bB6Ng01-223E14.g
ACCGA038073GA038074
length1,0841,051
definitionB6Ng01-223E14.b B6Ng01-223E14.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(133,905,157 - 133,906,232)(134,039,948 - 134,041,010)
sequence
gcagttcctgttagtagcttcctcttctcccccagttggcttccctggag
ccttcccacctttctgagagccccaccctgatcacctgtggacttgtacc
ttgaccagggaggttagtccagcccttgttgcccttgcttgacactactt
gcctagttcagacatccagttcattgtccatatctacttcctgcctggct
ccattgttagcagacggtagcacccatggccttttccctacccacccctc
ccaatgccaggatttgttctacagcctctgcaactctgaccacaggaaat
cgacatactcccgtcttgctgcatgaccttcagcaggtctctgcatctct
agacttgcacatttataaagcagcagggttggtccctgtgtgtatatatc
tgcaggtgcttattccctcgtttcttctttttgagaaaggggtcttgcta
tgtagatcaggctagccctgagctcacagggatccaactgcctttgcctt
gggggtgacaccagccccagtttacatgtcttctatagaagacagttcag
acttcagtttttttttttttttttttaagaaagtttcacagtgtatccct
ggttggcctcaggctaactttgtagaccagactggctttaaacttctagg
caatcctctagcccctgcctcccaagtgctgagattataggagtgaggtg
ctctacccagctcctgactattcttccaaagataagccatttgtttttgc
ttaatctttgttttaccttcaagtataaaaggactcttagttccccacct
tctggtgtatggtcaagcgctctgtgggagcgcactgttggggagtgtct
tcctcactttctggcacaaatcatccccaataaggcaggcatttaatttt
ttaagcaaaacagttactgtgtgccagatgggtatttcgtgcattatctc
gtttaaacccactcaacagccgcatggctctgcccgtggagtaacaaaca
ctacttctgtttgcttctcgagagcattttctgctcacagccaccctctg
aagaaacacttactctccctgcttgttcagatca
tttcacatctcttttgctagtacagaatgctcttccctgcttctcctttg
gatatttcagaaacgaaagaaagctttttttttttttaagtgctgtaagg
aggtgaacttttggagttcagaatcttggattttggtcctggctctgtca
ctttctgcgtggccttgagcaaattcattgtcttctaaccttaggttatc
tttgtatagcatgggtgagtgccttctgaccagcaggctcttgtctagtt
ctcccttactgtcctccagcaggcaccccacggaggcccagacccctctg
ctccccatgggcagctgccaggcagggcacaacttgcatctctgtctggc
tcatcacccacctttggtctgtgccactttgatcctgctgctccttggcc
tttctggcctgggccttggtggcttcctcctcacccacacaactggcctc
cgtagccctgacattccccaggtaagtacccggggtgctcacccttgtgg
tatatacccgcccctgctgctcttctcacctctctgtcactctccttttt
gcacgcaggattgggtttccttcttgagatcttttggccagctaagtctg
tgccccatgaatgagacagtcacagggacgtggcaagggcctcacgtcgt
cggcttactgaccactttgaacttcggagatggtccagacagaaacaaaa
cccaaacattccaagccaagatccatggtagtcagataggattgacaggt
gagacctggggaaaatggcggtccaatgtcacgacatttagggttgggct
tgacttctgacttcaccagactgctaacttggacacatccgtacacctta
gtgacttttgctatgacacaggttagataggatgagatacttacaatgaa
tgctgtccgcaatataggttctgtgtttggctttgctgtctgggtcccag
ttcttcaactctgtcctaaatataccaagagcttcagttaaaagcaagcc
ctgcctcattagcatagaagtagatagatacgaagagagagtgcagcatg
c
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_133905157_133906232
seq2: B6Ng01-223E14.b_50_1133

seq1  GCAGTTCCTGTTAGTAGCTTCCTCTTCTCCCCCAGTTGGCTTCCCTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTCCTGTTAGTAGCTTCCTCTTCTCCCCCAGTTGGCTTCCCTGGAG  50

seq1  CCTTCCCACCTTTCTGAGAGCCCCACCCTGATCACCTGTGGACTTGTACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCCACCTTTCTGAGAGCCCCACCCTGATCACCTGTGGACTTGTACC  100

seq1  TTGACCAGGGAGGTTAGTCCAGCCCTTGTTGCCCTTGCTTGACACTACTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCAGGGAGGTTAGTCCAGCCCTTGTTGCCCTTGCTTGACACTACTT  150

seq1  GCCTAGTTCAGACATCCAGTTCATTGTCCATATCTACTTCCTGCCTGGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTTCAGACATCCAGTTCATTGTCCATATCTACTTCCTGCCTGGCT  200

seq1  CCATTGTTAGCAGACGGTAGCACCCATGGCCTTTTCCCTACCCACCCCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTTAGCAGACGGTAGCACCCATGGCCTTTTCCCTACCCACCCCTC  250

seq1  CCAATGCCAGGATTTGTTCTACAGCCTCTGCAACTCTGACCACAGGAAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATGCCAGGATTTGTTCTACAGCCTCTGCAACTCTGACCACAGGAAAT  300

seq1  CGACATACTCCCGTCTTGCTGCATGACCTTCAGCAGGTCTCTGCATCTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGACATACTCCCGTCTTGCTGCATGACCTTCAGCAGGTCTCTGCATCTCT  350

seq1  AGACTTGCACATTTATAAAGCAGCAGGGTTGGTCCCTGTGTGTATATATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTGCACATTTATAAAGCAGCAGGGTTGGTCCCTGTGTGTATATATC  400

seq1  TGCAGGTGCTTATTCCCTCGTTTCTTCTTTTTGAGAAAGGGGTCTTGCTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGGTGCTTATTCCCTCGTTTCTTCTTTTTGAGAAAGGGGTCTTGCTA  450

seq1  TGTAGATCAGGCTAGCCCTGAGCTCACAGGGATCCAACTGCCTTTGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATCAGGCTAGCCCTGAGCTCACAGGGATCCAACTGCCTTTGCCTT  500

seq1  GGGGGTGACACCAGCCCCAGTTTACATGTCTTCTATAGAAGACAGTTCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGACACCAGCCCCAGTTTACATGTCTTCTATAGAAGACAGTTCAG  550

seq1  ACTTCAGTTTTTTTTTTTTTTTTTTTAAGAAAGTTTCACAGTGTATCCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGTTTTTTTTTTTTTTTTTTTAAGAAAGTTTCACAGTGTATCCCT  600

seq1  GGTTGGCCTCAGGCTAACTTTGTAGACCAGACTGGCTTTAAACTTCTAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGGCCTCAGGCTAACTTTGTAGACCAGACTGGCTTTAAACTTCTAGG  650

seq1  CAATCCTCTAGCCCCTGCCTCCCAAGTGCTGAGATTATAGGAGTGAGGTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTCTAGCCCCTGCCTCCCAAGTGCTGAGATTATAGGAGTGAGGTG  700

seq1  CTCTACCCAGCTCCTGACTATTCTTCCAAAGATAAGCCATTTGTTTTTGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACCCAGCTCCTGACTATTCTTCCAAAGATAAGCCATTTGTTTTTGC  750

seq1  TTAATCTTTGTTTTACCTTCAAGTATAAAAGGACTCTTAGTTCCCCACCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATCTTTGTTTTACCTTCAAGTATAAAAGGACTCTTAGTTCCCCACCT  800

seq1  TCTGGTGTATGGTCAAGCGCTCTGTGGGAGCGCACTGTTGGGGAGTGTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGTGTATGGTCAAGCGCTCTGTGGGAGCGCACTGTTGGGGAGTGTCT  850

seq1  TCCTCACTTTCTGGCACAAATCATCCCC-ATAAGGCAGGCATTTA--TTT  897
      |||||||||||||||||||||||||||| ||||||||||||||||  |||
seq2  TCCTCACTTTCTGGCACAAATCATCCCCAATAAGGCAGGCATTTAATTTT  900

seq1  TTAAGC-AAACAGTTACTGTGTGCCAGAT-GGTA-TTCGTGCATTATCTC  944
      |||||| |||||||||||||||||||||| |||| |||||||||||||||
seq2  TTAAGCAAAACAGTTACTGTGTGCCAGATGGGTATTTCGTGCATTATCTC  950

seq1  GTTT-AACCCACTCAACAGCCGCATGGCTCTGCCCGTGGAGTAAC-AACA  992
      |||| |||||||||||||||||||||||||||||||||||||||| ||||
seq2  GTTTAAACCCACTCAACAGCCGCATGGCTCTGCCCGTGGAGTAACAAACA  1000

seq1  CTACTTCTTGTTTGCTTCTCCGAGAGCATTTTCTGCTCACAGCCACCCTC  1042
      ||||||| ||||||||||| ||||||||||||||||||||||||||||||
seq2  CTACTTC-TGTTTGCTTCT-CGAGAGCATTTTCTGCTCACAGCCACCCTC  1048

seq1  TGAAG-AACACTTACTCTCCCTGCTTG-TCAGATCA  1076
      ||||| ||||||||||||||||||||| ||||||||
seq2  TGAAGAAACACTTACTCTCCCTGCTTGTTCAGATCA  1084

seq1: chr7_134039948_134041010
seq2: B6Ng01-223E14.g_74_1124 (reverse)

seq1  GCATGCTTGCACTCTCTCTTCGTATCTATCTAACTTTCTATGCCTAATGG  50
      |||||| |||||||||||||||||||||||||   ||||||| |||||| 
seq2  GCATGC-TGCACTCTCTCTTCGTATCTATCTA--CTTCTATG-CTAATGA  46

seq1  GGCAGGGCCTTGCTTTTAAACCTGAGGCCTCTTGGTATATTTTAGGACAG  100
      ||||||| |||||||||||  |||| | ||||||||||| ||||||||||
seq2  GGCAGGG-CTTGCTTTTAA--CTGAAG-CTCTTGGTATA-TTTAGGACAG  91

seq1  AGTTGAAGAAACTTGGAACCAGAACAGCAAAGCCAAAACACAGAACCTAT  150
      |||||||| |||| ||| |||| ||||||||||| |||||||||||||||
seq2  AGTTGAAG-AACTGGGACCCAG-ACAGCAAAGCC-AAACACAGAACCTAT  138

seq1  ATTGCGGACAGCATTCATTGTAAGTATCTCATCCTATCTAACCTGTGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCGGACAGCATTCATTGTAAGTATCTCATCCTATCTAACCTGTGTCA  188

seq1  TAGCAAAAGTCACTAAGGTGTACGGATGTGTCCAAGTTAGCAGTCTGGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAAGTCACTAAGGTGTACGGATGTGTCCAAGTTAGCAGTCTGGTG  238

seq1  AAGTCAGAAGTCAAGCCCAACCCTAAATGTCGTGACATTGGACCGCCATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAGAAGTCAAGCCCAACCCTAAATGTCGTGACATTGGACCGCCATT  288

seq1  TTCCCCAGGTCTCACCTGTCAATCCTATCTGACTACCATGGATCTTGGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCAGGTCTCACCTGTCAATCCTATCTGACTACCATGGATCTTGGCT  338

seq1  TGGAATGTTTGGGTTTTGTTTCTGTCTGGACCATCTCCGAAGTTCAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAATGTTTGGGTTTTGTTTCTGTCTGGACCATCTCCGAAGTTCAAAGT  388

seq1  GGTCAGTAAGCCGACGACGTGAGGCCCTTGCCACGTCCCTGTGACTGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGTAAGCCGACGACGTGAGGCCCTTGCCACGTCCCTGTGACTGTCT  438

seq1  CATTCATGGGGCACAGACTTAGCTGGCCAAAAGATCTCAAGAAGGAAACC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATGGGGCACAGACTTAGCTGGCCAAAAGATCTCAAGAAGGAAACC  488

seq1  CAATCCTGCGTGCAAAAAGGAGAGTGACAGAGAGGTGAGAAGAGCAGCAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCCTGCGTGCAAAAAGGAGAGTGACAGAGAGGTGAGAAGAGCAGCAG  538

seq1  GGGCGGGTATATACCACAAGGGTGAGCACCCCGGGTACTTACCTGGGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCGGGTATATACCACAAGGGTGAGCACCCCGGGTACTTACCTGGGGAA  588

seq1  TGTCAGGGCTACGGAGGCCAGTTGTGTGGGTGAGGAGGAAGCCACCAAGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGGGCTACGGAGGCCAGTTGTGTGGGTGAGGAGGAAGCCACCAAGG  638

seq1  CCCAGGCCAGAAAGGCCAAGGAGCAGCAGGATCAAAGTGGCACAGACCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGGCCAGAAAGGCCAAGGAGCAGCAGGATCAAAGTGGCACAGACCAA  688

seq1  AGGTGGGTGATGAGCCAGACAGAGATGCAAGTTGTGCCCTGCCTGGCAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGGTGATGAGCCAGACAGAGATGCAAGTTGTGCCCTGCCTGGCAGC  738

seq1  TGCCCATGGGGAGCAGAGGGGTCTGGGCCTCCGTGGGGTGCCTGCTGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCCATGGGGAGCAGAGGGGTCTGGGCCTCCGTGGGGTGCCTGCTGGAG  788

seq1  GACAGTAAGGGAGAACTAGACAAGAGCCTGCTGGTCAGAAGGCACTCACC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGTAAGGGAGAACTAGACAAGAGCCTGCTGGTCAGAAGGCACTCACC  838

seq1  CATGCTATACAAAGATAACCTAAGGTTAGAAGACAATGAATTTGCTCAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTATACAAAGATAACCTAAGGTTAGAAGACAATGAATTTGCTCAAG  888

seq1  GCCACGCAGAAAGTGACAGAGCCAGGACCAAAATCCAAGATTCTGAACTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACGCAGAAAGTGACAGAGCCAGGACCAAAATCCAAGATTCTGAACTC  938

seq1  CAAAAGTTCACCTCCTTACAGCACTTAAAAAAAAAAAAAGCTTTCTTTCG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGTTCACCTCCTTACAGCACTTAAAAAAAAAAAAAGCTTTCTTTCG  988

seq1  TTTCTGAAATATCCAAAGGAGAAGCAGGGAAGAGCATTCTGTACTAGCAA  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGAAATATCCAAAGGAGAAGCAGGGAAGAGCATTCTGTACTAGCAA  1038

seq1  AAGAGATGTGAAA  1063
      |||||||||||||
seq2  AAGAGATGTGAAA  1051