BAC Information

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BAC

Clone NameB6Ng01-224B03
Chromosome7 (Build37)
Map Location 101,494,589 - 101,495,752
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC666783, EG638305, EG545982
Downstream geneEG666816, LOC100040132
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224B03.bB6Ng01-224B03.g
ACCGA038637GA038638
length1,1561,184
definitionB6Ng01-224B03.b B6Ng01-224B03.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctttacattcttttatttatctggggtgctagcagatgaggtcc
tctcccaaactggatatataagggaattatatgggaaaaaataccaccat
agcatattaacaatcagagaaaatggtatgcaatcaagttttatcaatta
atcctagaagcagctcctgtttgactagcatgagatatatttaaaaacat
atttttcctctattgaaatgaagacaacaaatggaaacacatacataatc
ttttctgaatcatcatgttaaaacctacaaaactgcaattgcactgacac
ttcacacacagatacattgtatataaaaatattttcctactcaaagaaca
ggctcaaacaccataaaaattgtctcttgaacaaaccatctgatgcaatt
cacaaggtaaaaactagatctttgtgtttcagtgatatgtagccccttta
tttaagtccatggaacctttccatggacttaaataaaagaggacaaaaga
gctaacacattctataggaaacaaatctggaacactcttcattactgcaa
aacctccaactttgtactaacagttatttcaacctttacgactcatgaat
aacaaaaaggcatgcttctcttattatattaaatcccccaaatcctctat
gattttcaaattaactgttagaaaaaataacaagctgtgataaaattact
taaatatgttttgttaccattttccagaatgcatggtttgattttttaaa
tattccttagcaaacccattggtatgtaatattcttagtgacttcacttg
agaacggcaatgctagaaagaatgtagaatatccactgaacaaaatgagc
ataaaaaagagctgtggtcacttaccagtcgatgctttccttagcattca
tttccaaacaaaattgaccttaaaagaataaaaataaataattaatatat
ataatgaacatataaacatacatctcaattattatactgggtcattcatt
taactcctgggtgtttaactcctcccacccttattcctatcacagaatgg
tagcagctgaattttggccaaggattgctggttcatagcctactagctgc
atactccctcggaagtgatgggtggatgtagaagagagccatggtgagag
tagtac
gaattcaaggccaatacgtaaacatgataaaagcaatctacaggaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactgaa
atcagggactagacaaggctgcccactattttccctacctattcaacatt
gtacttgaagtcctagccagagcaatttgacaacaaaaggagatcaaggg
gatacaaattggaaaggaagaagtcaaaatatcactttttacagatgata
tgatagtatatataagtgaccctaaaaaattccaccagaaaactcctaaa
ccagataaacagcttcagtgacttagctggatataaatttaactgaaaca
agtcaatggcctttctctacacaaaggataaacaggctgagaaagaaatt
agggaaacaacacctttcacaatagttacaaataatataaaataccttgc
catgactctaactaaggaagtgaactatctgtatgataagaacttcaagt
ctctgaagaaagaaattaaagaagatctcagaagatgcaaagatctccca
tgctcatggattggcaggattgacataacaaaatggctatcttgacaaaa
gcaatctacagattcaatgcaatccccaccaaattccaaatcaattcttc
actgaattagaaagggcaatctacaaattcatctggaataacaaaaaaaa
tctaggatagcaaaaacacttctcaatgataaaagaacctcttgtaaaat
ctccatgcctgacctaaagctgtactacagagcaaccatgttaaaaactg
catggtgctggtatagtgacagacaagtagaccaatggaatagaattgaa
gacccagaaatgatcccacatatctatggtcacttgatctttgacaaggg
agctaaaaccatccagtggaaaaaaagacagcattttgaacaaatggtgc
tgttacactggcagttatcatgtagaagaatgcgaatgatccattcctat
ctgctgtactacgtcaaatctaagtggatcaaggaactcacataaaacca
gagacagtgaatttatagagggtaaggtgggggtaagtctcaagttatgg
gcacaggaaaatcttgaattgaaacgcatgctgtgctgtaagatggagga
attcaacaatggactcatatataaaaattgtcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_101494589_101495752
seq2: B6Ng01-224B03.b_45_1200 (reverse)

seq1  GTACTACTTCCTCA-CAT-GCTCTCTCTAACATCCACCCATCACTTTCCG  48
      ||||||||  |||| ||| |||||||   ||||||||||||||| |||||
seq2  GTACTACT--CTCACCATGGCTCTCTTCTACATCCACCCATCAC-TTCCG  47

seq1  AGGGAAGTATGCAGCTAAGTTAGCTATGAACCAGCAATCCTTGGCCAAAA  98
      |||| ||||||||||| |||  ||||||||||||||||||||||||||||
seq2  AGGG-AGTATGCAGCT-AGTAGGCTATGAACCAGCAATCCTTGGCCAAAA  95

seq1  TTCAGCTGCTACCATTCTGTGATAGGAATTAAAGGGTGGGAGGAGTTAAA  148
      |||||||||||||||||||||||||||||  |||||||||||||||||||
seq2  TTCAGCTGCTACCATTCTGTGATAGGAAT--AAGGGTGGGAGGAGTTAAA  143

seq1  CACCCAGGAGTTAAATGAATGA-CCAGTATAATAATTTGAGATGTATGTT  197
      |||||||||||||||||||||| |||||||||||| |||||||||||| |
seq2  CACCCAGGAGTTAAATGAATGACCCAGTATAATAA-TTGAGATGTATG-T  191

seq1  TTATATGTTCATTATTATATATTAATTATTTATTTTTATTCTTTTAAGGT  247
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTATATGTTCATTA-TATATATTAATTATTTATTTTTATTCTTTTAAGGT  240

seq1  CAATTTTGTTTGGAAATGAATGCTAAGGAAAGCATCGACTGGTAAGTGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTTGTTTGGAAATGAATGCTAAGGAAAGCATCGACTGGTAAGTGAC  290

seq1  CACAGCTCTTTTTTATGCTCATTTTGTTCAGTGGATATTCTACATTCTTT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCTCTTTTTTATGCTCATTTTGTTCAGTGGATATTCTACATTCTTT  340

seq1  CTAGCATTGCCGTTCTCAAGTGAAGTCACTAAGAAATATTACATACCAAT  397
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTAGCATTGCCGTTCTCAAGTGAAGTCACTAAG-AATATTACATACCAAT  389

seq1  GGGTTTGCTAAGGAATATTTAAAAAATCAAACCATGCATTCTGGAAAATG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTTGCTAAGGAATATTTAAAAAATCAAACCATGCATTCTGGAAAATG  439

seq1  GTAACAAAACATATTTAAGTAATTTTATCACAGCTTGTTATTTTTTCTAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAACAAAACATATTTAAGTAATTTTATCACAGCTTGTTATTTTTTCTAA  489

seq1  CAGTTAATTTGAAAATCATAGAGGATTTGGGGGATTTAATATAATAAGAG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTAATTTGAAAATCATAGAGGATTTGGGGGATTTAATATAATAAGAG  539

seq1  AAGCATGCCTTTTTGTTATTCATGAGTCGTAAAGGTTGAAATAACTGTTA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATGCCTTTTTGTTATTCATGAGTCGTAAAGGTTGAAATAACTGTTA  589

seq1  GTACAAAGTTGGAGGTTTTGCAGTAATGAAGAGTGTTCCAGATTTGTTTC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACAAAGTTGGAGGTTTTGCAGTAATGAAGAGTGTTCCAGATTTGTTTC  639

seq1  CTATAGAATGTGTTAGCTCTTTTGTCCTCTTTTATTTAAGTCCATGGAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAATGTGTTAGCTCTTTTGTCCTCTTTTATTTAAGTCCATGGAAA  689

seq1  GGTTCCATGGACTTAAATAAAGGGGCTACATATCACTGAAACACAAAGAT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCATGGACTTAAATAAAGGGGCTACATATCACTGAAACACAAAGAT  739

seq1  CTAGTTTTTACCTTGTGAATTGCATCAGATGGTTTGTTCAAGAGACAATT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGTTTTTACCTTGTGAATTGCATCAGATGGTTTGTTCAAGAGACAATT  789

seq1  TTTATGGTGTTTGAGCCTGTTCTTTGAGTAGGAAAATATTTTTATATACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGGTGTTTGAGCCTGTTCTTTGAGTAGGAAAATATTTTTATATACA  839

seq1  ATGTATCTGTGTGTGAAGTGTCAGTGCAATTGCAGTTTTGTAGGTTTTAA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATCTGTGTGTGAAGTGTCAGTGCAATTGCAGTTTTGTAGGTTTTAA  889

seq1  CATGATGATTCAGAAAAGATTATGTATGTGTTTCCATTTGTTGTCTTCAT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATGATTCAGAAAAGATTATGTATGTGTTTCCATTTGTTGTCTTCAT  939

seq1  TTCAATAGAGGAAAAATATGTTTTTAAATATATCTCATGCTAGTCAAACA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGAGGAAAAATATGTTTTTAAATATATCTCATGCTAGTCAAACA  989

seq1  GGAGCTGCTTCTAGGATTAATTGATAAAACTTGATTGCATACCATTTTCT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCTTCTAGGATTAATTGATAAAACTTGATTGCATACCATTTTCT  1039

seq1  CTGATTGTTAATATGCTATGGTGGTATTTTTTCCCATATAATTCCCTTAT  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATTGTTAATATGCTATGGTGGTATTTTTTCCCATATAATTCCCTTAT  1089

seq1  ATATCCAGTTTGGGAGAGGACCTCATCTGCTAGCACCCCAGATAAATAAA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCAGTTTGGGAGAGGACCTCATCTGCTAGCACCCCAGATAAATAAA  1139

seq1  AGAATGTAAAGGAATTC  1164
      |||||||||||||||||
seq2  AGAATGTAAAGGAATTC  1156