BAC Information

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BAC

Clone NameB6Ng01-224E07
Chromosome7 (Build37)
Map Location 58,196,587 - 58,418,296
singlet/doubletdoublet
Overlap geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776
Upstream geneSlc6a5, Nell1, 4933405O20Rik
Downstream geneLOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608, Gas2, 1700015G11Rik, EG668783
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-224E07.bB6Ng01-224E07.g
ACCGA038775GA038776
length1,148917
definitionB6Ng01-224E07.b B6Ng01-224E07.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(58,417,150 - 58,418,296)(58,196,587 - 58,197,502)
sequence
gaattccagcacatcctggaacaatgcctttaagccaaacacagctacag
agtaaaaccccttctgaacaaaacaaaatcacaaagcaaacaaacaaacg
aaccaaacaaaaaaacccaacaacaacaaacaacctaaaaaaccaccaaa
acaccaaacctttgaatgaaacaggacagtagagttgcagaggaaggaac
tagttcatctttgataagagagagggctctttggtaagattatctactat
tgtggtaagaattacaactcttaagagaaaagcttagattcactcaacta
gatagcagattcactcagctaggtggctgattcaatcctctctctacata
ccagacttaattcctttaccaaatccaatagctgatcctgatccatgagc
cacgccctgatgctctcagaatctaatcagaggaagaatttgtgtctctg
ggaaccattcagacaataggatattctggtttcatagtttgacctggttc
ttactttccaccatgtttctggactagtacacgtagagccatctcaatgg
ctctagatttgcatttccttagtatctatattttgtgatttatatcaaat
aaagatgatgtgcatttttagatttttagaaacactactcaatttagggc
tttctgtgtaatcccttccattggtagattgcttgtttagtatgcaagaa
accatgagtatgtttccctcgtaatacctaataaattggacatggtatca
aatataagtacttcccagtgggaattcaatccaaggtaaagggcattgta
agagttagattctctagagtcacagaacttagagtatgaatctctctccc
tctctctcacacacacatacacaaactcacatattttggatctacatagg
ggactacatatatgagactcattagaatgacctgacttacaggatgggcc
tcttgctaatccagtgacgtctgtcttatgaatggaaagtcccagatcca
agtgcctcagtcaatgtctcagctgtctttcagtagagctgaattcccaa
agagtagctctgatggccaaagaaggagtacatctacctagcaaggccga
agctaaatgtgaaattccttcctccatggtccatttactcttggttat
gaattcttccctggacaaaagaggtgcttgtgttgtgggcatggtatttg
aatgggcagtgggaacacctggtgaaaagcaagctgttgatatattggca
ggagctggtggaaatcctggaggagggacactatatcctgctgttggagg
ctggccaggaggaacccgaggaggaaaccgtggggcaggtacacctggag
gaagaggaagcatatgtggaggagacggtggcaaaagaggtggtggaata
ggcacaaagactggagttgctggtcgtgatgggccttgactcctctgtga
tggttcactgtagtctcgcccacgttttattcctcggtaacagcttcttt
cttcacttctaatttgctgtgttggagaaactagcttcccaatcttgttg
gaatgttcccaacctggttgaccaccacttggatgagcagcatttattct
tactggaccagttgtggggatagactgttcatggagtagtgactgtccca
acgaaggtggagtttcaaggaccgccacctggccacgcttttcttccata
ggagcagtaacagcaattgaagaggctccctttgaatgttctgatgtaag
ggcggcagctggtaataattggttttctgattcccgaaaggatccatctg
atttttctgaaaggtctgatacagatactcttgcagtggtctcgggtacg
ggagctggggcaggagatgggtttccaggcacagaaggagccgaggaaga
tgaatttgaagctaatgaggttacagagggagttgggtgagctgaggctg
aggacgatgtcattggaatcttcagaggatcctgctgtctagatgtgaga
gattttcataggaggctgcaggttctgctgaatgagtgcacttggtggag
gtagtgggggtggggac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_58417150_58418296
seq2: B6Ng01-224E07.b_47_1194 (reverse)

seq1  ATAACCAA-AATAAATGGGACATGGAGGAAGGAAATTTTGCATTTTGCTC  49
      |||||||| | |||||||  |||||||||||| |||||  ||||| ||| 
seq2  ATAACCAAGAGTAAATGGACCATGGAGGAAGG-AATTTCACATTTAGCT-  48

seq1  TCGG-CTTGCTAGCTAG-TGTACTCCTTCTCTGG-CATCAGAGCCTACTC  96
      |||| |||||||| ||| |||||||||||| ||| |||||||| ||||||
seq2  TCGGCCTTGCTAGGTAGATGTACTCCTTCTTTGGCCATCAGAG-CTACTC  97

seq1  TTTTGGGATTCCAGCTCTTACTGAAGACCAGCTGAGACATTGACTGAGCA  146
       ||||||| | |||||| |||||||   ||||||||||||||||||||  
seq2  -TTTGGGAATTCAGCTC-TACTGAAAGACAGCTGAGACATTGACTGAGGC  145

seq1  ACTTTGGATTCTTGGACTTTCCATTCAT-AGACAGACGTCACTGGATTAG  195
      || ||||| ||| ||||||||||||||| |||||||||||||||||||||
seq2  AC-TTGGA-TCTGGGACTTTCCATTCATAAGACAGACGTCACTGGATTAG  193

seq1  CAAGA-GCCCATCCTGTAAGTCA-GTCATTCTAATGAGTCTCATATATGT  243
      ||||| ||||||||||||||||| ||||||||||||||||||||||||||
seq2  CAAGAGGCCCATCCTGTAAGTCAGGTCATTCTAATGAGTCTCATATATGT  243

seq1  AAGTCCCCTATGTAGATCC-AAATATGTGAGTTTGTGTATGTGTGTGTGA  292
       |||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  -AGTCCCCTATGTAGATCCAAAATATGTGAGTTTGTGTATGTGTGTGTGA  292

seq1  GAGAGAGGGAGAGAGATTCATACTCTAAGTTCTGTGACTCTAGAGAATCT  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGGGAGAGAGATTCATACTCTAAGTTCTGTGACTCTAGAGAATCT  342

seq1  AACTCTTACAATGCCCTTTACCTTGGATTGAATTCCCACTGGGAAGTACT  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTTACAATGCCCTTTACCTTGGATTGAATTCCCACTGGGAAGTACT  392

seq1  TATATTTGATACCATGTCCAATTTATTAGGTATTACGAGGG-AACATACT  441
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TATATTTGATACCATGTCCAATTTATTAGGTATTACGAGGGAAACATACT  442

seq1  CATGGTTTCTTGCATACTAAACAAGCAATCTACCAATGGAAGGGATTACA  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGGTTTCTTGCATACTAAACAAGCAATCTACCAATGGAAGGGATTACA  492

seq1  CAGAAAGCCCTAAATTGAGTAGTGTTTCTAAAAATCTAAAAATGCACATC  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAGCCCTAAATTGAGTAGTGTTTCTAAAAATCTAAAAATGCACATC  542

seq1  ATCTTTATTTGATATAAATCACAAAATATAGATACTAAGGAAATGCAAAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTATTTGATATAAATCACAAAATATAGATACTAAGGAAATGCAAAT  592

seq1  CTAGAGCCATTGAGATGGCTCTACGTGTACTAGTCCAGAAACATGGTGGA  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGCCATTGAGATGGCTCTACGTGTACTAGTCCAGAAACATGGTGGA  642

seq1  AAGTAAGAACCAGGTCAAACTATGAAACCAGAATATCCTATTGTCTGAAT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAGAACCAGGTCAAACTATGAAACCAGAATATCCTATTGTCTGAAT  692

seq1  GGTTCCCAGAGACACAAATTCTTCCTCTGATTAGATTCTGAGAGCATCAG  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCCAGAGACACAAATTCTTCCTCTGATTAGATTCTGAGAGCATCAG  742

seq1  GGCGTGGCTCATGGATCAGGATCAGCTATTGGATTTGGTAAAGGAATTAA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGTGGCTCATGGATCAGGATCAGCTATTGGATTTGGTAAAGGAATTAA  792

seq1  GTCTGGTATGTAGAGAGAGGATTGAATCAGCCACCTAGCTGAGTGAATCT  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGTATGTAGAGAGAGGATTGAATCAGCCACCTAGCTGAGTGAATCT  842

seq1  GCTATCTAGTTGAGTGAATCTAAGCTTTTCTCTTAAGAGTTGTAATTCTT  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTAGTTGAGTGAATCTAAGCTTTTCTCTTAAGAGTTGTAATTCTT  892

seq1  ACCACAATAGTAGATAATCTTACCAAAGAGCCCTCTCTCTTATCAAAGAT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCACAATAGTAGATAATCTTACCAAAGAGCCCTCTCTCTTATCAAAGAT  942

seq1  GAACTAGTTCCTTCCTCTGCAACTCTACTGTCCTGTTTCATTCAAAGGTT  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTAGTTCCTTCCTCTGCAACTCTACTGTCCTGTTTCATTCAAAGGTT  992

seq1  TGGTGTTTTGGTGGTTTTTTAGGTTGTTTGTTGTTGTTGGGTTTTTTTGT  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTTTTGGTGGTTTTTTAGGTTGTTTGTTGTTGTTGGGTTTTTTTGT  1042

seq1  TTGGTTCGTTTGTTTGTTTGCTTTGTGATTTTGTTTTGTTCAGAAGGGGT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTTCGTTTGTTTGTTTGCTTTGTGATTTTGTTTTGTTCAGAAGGGGT  1092

seq1  TTTACTCTGTAGCTGTGTTTGGCTTAAAGGCATTGTTCCAGGATGTGCTG  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTCTGTAGCTGTGTTTGGCTTAAAGGCATTGTTCCAGGATGTGCTG  1142

seq1  GAATTC  1147
      ||||||
seq2  GAATTC  1148

seq1: chr7_58196587_58197502
seq2: B6Ng01-224E07.g_68_984

seq1  GAATTCTTCCCTGGACAAAAGAGGTGCTTGTGTTGTGGGCATGGTATTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCCCTGGACAAAAGAGGTGCTTGTGTTGTGGGCATGGTATTTG  50

seq1  AATGGGCAGTGGGAACACCTGGTGAAAAGCAAGCTGTTGATATATTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGGCAGTGGGAACACCTGGTGAAAAGCAAGCTGTTGATATATTGGCA  100

seq1  GGAGCTGGTGGAAATCCTGGAGGAGGGACACTATATCCTGCTGTTGGAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGTGGAAATCCTGGAGGAGGGACACTATATCCTGCTGTTGGAGG  150

seq1  CTGGCCAGGAGGAACCCGAGGAGGAAACCGTGGGGCAGGTACACCTGGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGCCAGGAGGAACCCGAGGAGGAAACCGTGGGGCAGGTACACCTGGAG  200

seq1  GAAGAGGAAGCATATGTGGAGGAGACGGTGGCAAAAGAGGTGGTGGAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAGGAAGCATATGTGGAGGAGACGGTGGCAAAAGAGGTGGTGGAATA  250

seq1  GGCACAAAGACTGGAGTTGCTGGTCGTGATGGGCCTTGACTCCTCTGTGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAAGACTGGAGTTGCTGGTCGTGATGGGCCTTGACTCCTCTGTGA  300

seq1  TGGTTCACTGTAGTCTCGCCCACGTTTTATTCCTCGGTAACAGCTTCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTTCACTGTAGTCTCGCCCACGTTTTATTCCTCGGTAACAGCTTCTTT  350

seq1  CTTCACTTCTAATTTGCTGTGTTGGAGAAACTAGCTTCCCAATCTTGTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCACTTCTAATTTGCTGTGTTGGAGAAACTAGCTTCCCAATCTTGTTG  400

seq1  GAATGTTCCCAACCTGGTTGACCACCACTTGGATGAGCAGCATTTATTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGTTCCCAACCTGGTTGACCACCACTTGGATGAGCAGCATTTATTCT  450

seq1  TACTGGACCAGTTGTGGGGATAGACTGTTCATGGAGTAGTGACTGTCCCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGACCAGTTGTGGGGATAGACTGTTCATGGAGTAGTGACTGTCCCA  500

seq1  ACGAAGGTGGAGTTTCAAGGACCGCCACCTGGCCACGCTTTTCTTCCATA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAAGGTGGAGTTTCAAGGACCGCCACCTGGCCACGCTTTTCTTCCATA  550

seq1  GGAGCAGTAACAGCAATTGAAGAGGCTCCCTTTGAATGTTCTGATGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCAGTAACAGCAATTGAAGAGGCTCCCTTTGAATGTTCTGATGTAAG  600

seq1  GGCGGCAGCTGGTAATAATTGGTTTTCTGATTCCCGAAAGGATCCATCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCGGCAGCTGGTAATAATTGGTTTTCTGATTCCCGAAAGGATCCATCTG  650

seq1  ATTTTTCTGAAAGGTCTGATACAGATACTCTTGCAGTGGTCTCGGGTACG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTCTGAAAGGTCTGATACAGATACTCTTGCAGTGGTCTCGGGTACG  700

seq1  GGAGCTGGGGCAGGAGATGGGTTTCCAGGCACAGAAGGAGCCGAGGAAGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGGGGCAGGAGATGGGTTTCCAGGCACAGAAGGAGCCGAGGAAGA  750

seq1  TGAATTTGAAGCTAATGAGGTTACAGAGGGAGTTGGGTGAGCTGAGGCTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTGAAGCTAATGAGGTTACAGAGGGAGTTGGGTGAGCTGAGGCTG  800

seq1  AGGACGATGTCATTGGAATCTTCAGAGGATCCTGCTGTCTAGATGTGAGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACGATGTCATTGGAATCTTCAGAGGATCCTGCTGTCTAGATGTGAGA  850

seq1  GA-TTTCATAGGAGGCTGCAGGTTCTGCTGAATGAGTGCACTTGGTGGAG  899
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCATAGGAGGCTGCAGGTTCTGCTGAATGAGTGCACTTGGTGGAG  900

seq1  GTAGTGGGGGTGGGGAC  916
      |||||||||||||||||
seq2  GTAGTGGGGGTGGGGAC  917