BAC Information

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BAC

Clone NameB6Ng01-226C18
Chromosome7 (Build37)
Map Location 120,802,161 - 120,966,310
singlet/doubletdoublet
Overlap geneEG434228, Spon1
Upstream geneLOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736, Mlstd2
Downstream geneRras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1, Calca, LOC100043295, Calcb, Insc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-226C18.bB6Ng01-226C18.g
ACCGA040180GA040181
length1,0761,065
definitionB6Ng01-226C18.b B6Ng01-226C18.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(120,802,161 - 120,803,219)(120,965,236 - 120,966,310)
sequence
gaattcagcatccttttttcctttgttccttctctcctcctacctcattc
tcctccatggaattaagaagtagtgtgggtttttagttaaatataaaata
ctaacaagggagtccctgcataccgttggccacctggctaccagttttct
cttgttgaactgggttgggttgttgctttctctttgtctaccaccggtac
tatccctagatcctttcctctcaaacctccttttgagaatctgttttctc
tctcctctactaagcagctctatgcccactccttctctcaagtgtacata
ctgacagttaacttttctgaaaatagtatgctcctgcccacaggaccacc
atccctatggtcacactgtagtgaccatcttcagctcctttaaactgtcc
tgattctattacacaccccaatgccttcatattccttaataatccattcc
ttttaattatgagttcttcgcatgatgattccaacaactgaagtgtctca
atcctattacaaggcatgtatacatattcttagaacaaccaatttattaa
agttatcagtaggaagtaaaacacctctctctctctctttctctctctct
ctctctctctctctctctctctcacacacacacacacacacacagagaga
gagagagagagagagagagagagagagagagagatcaagtcttatgccct
atatataagccatgaatctgatgccttacaaggcagatgtgtttcacata
ttgagatggtgcctagtttcattctgtgataacaacaataaaccctaatc
agaggccgttttaggggaggaaagggtttattttagtcttacacttccat
atttatgattttattcatttgaagaaagttggggtaagcaatcaaggcag
gaaacctgaaggcaggcctgcttgctactccagatccacactacctctat
caggggaactcacacacaggccaaggaagtacaccaggaaccaggcagaa
atgctgctgcaccattttcttggattacctccgcaggctccatgctcagc
tagcttttcttaatacagaaccaaga
gaattctctcaataccaggagttgactaacccaggagacatcctacatag
acaggaatgacccttattactgtgctagcagcaacagttcattacaggaa
aatccgaaggcagagacagacagacagacagacagagatactacttgtta
ttgtattgcaatacagcagttcttgatgcttgtttatatcttttcataca
catatacatgtacagtatgtatttgcttcatatatgtatatatatatgca
tacacacacatttctagatgcaggattttattgtacttcctatctcataa
tctgcctttcagatatcttgttccattctgcaatatatcataaccatctt
tcttttccattcagtatataatctcagtaagattgctcttggctgaaaca
tagtccactttattcatttaactaataaaaattaaagtgttgagcatatg
ttgtttataattggagactactgtgattatccttagtgcctacattttat
atctttagtttttctgaaattaatgtacgattaaacagaattaattgttg
ttgagtcttcctaggatcaaatttttaactacaataaaatctgaaaaaat
ccaaagaaaataatgccacccattatattacctattactatcatttgagc
ccttgcagggtttatctttgcttttattttatctgtgtgttttcctgcat
gtatgtctgtgtaccatatatgtgagcttccctcagacatcagaagagaa
taccaagtctctaggcagtaagagggttgtcaaccactttgtgggtgctg
ggaactgaactcaggtgctcttcaagagtagccagtgctcctaatttccc
agccatcttcccagccctcaccggggagttgttattgcttgttgtttgtt
attttcatttgaaaatcactgaaggaaagatagatacttctgtcttttta
gaaagggctttcaaggtagatttcttatataagatcctggcttaatattg
ttccaacagcagctttttatggaaaaggtttacaagacgaaagtaaagag
acatactcaactgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120802161_120803219
seq2: B6Ng01-226C18.b_45_1120

seq1  GAATTCAGCATCCTTTTTTCCTTTGTTCCTTCTCTCCTCCTACCTCATTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCATCCTTTTTTCCTTTGTTCCTTCTCTCCTCCTACCTCATTC  50

seq1  TCCTCCATGGAATTAAGAAGTAGTGTGGGTTTTTAGTTAAATATAAAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCATGGAATTAAGAAGTAGTGTGGGTTTTTAGTTAAATATAAAATA  100

seq1  CTAACAAGGGAGTCCCTGCATACCGTTGGCCACCTGGCTACCAGTTTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAGGGAGTCCCTGCATACCGTTGGCCACCTGGCTACCAGTTTTCT  150

seq1  CTTGTTGAACTGGGTTGGGTTGTTGCTTTCTCTTTGTCTACCACCGGTAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTGAACTGGGTTGGGTTGTTGCTTTCTCTTTGTCTACCACCGGTAC  200

seq1  TATCCCTAGATCCTTTCCTCTCAAACCTCCTTTTGAGAATCTGTTTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTAGATCCTTTCCTCTCAAACCTCCTTTTGAGAATCTGTTTTCTC  250

seq1  TCTCCTCTACTAAGCAGCTCTATGCCCACTCCTTCTCTCAAGTGTACATA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTCTACTAAGCAGCTCTATGCCCACTCCTTCTCTCAAGTGTACATA  300

seq1  CTGACAGTTAACTTTTCTGAAAATAGTATGCTCCTGCCCACAGGACCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGTTAACTTTTCTGAAAATAGTATGCTCCTGCCCACAGGACCACC  350

seq1  ATCCCTATGGTCACACTGTAGTGACCATCTTCAGCTCCTTTAAACTGTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTATGGTCACACTGTAGTGACCATCTTCAGCTCCTTTAAACTGTCC  400

seq1  TGATTCTATTACACACCCCAATGCCTTCATATTCCTTAATAATCCATTCC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCTATTACACACCCCAATGCCTTCATATTCCTTAATAATCCATTCC  450

seq1  TTTTAATTATGAGTTCTTCGCATGATGATTCCAACAACTGAAGTGTCTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATTATGAGTTCTTCGCATGATGATTCCAACAACTGAAGTGTCTCA  500

seq1  ATCCTATTACAAGGCATGTATACATATTCTTAGAACAACCAATTTATTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTATTACAAGGCATGTATACATATTCTTAGAACAACCAATTTATTAA  550

seq1  AGTTATCAGTAGGAAGTAAAACACCTCTCTCTCTCTCTTTCTCTCTCTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTATCAGTAGGAAGTAAAACACCTCTCTCTCTCTCTTTCTCTCTCTCT  600

seq1  CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACAGAGA  650
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACAGAGAGA  650

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAAGTCTTATGCCCT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGATCAAGTCTTATGCCCT  700

seq1  ATATATAAGCCATGAATCTGATGCCTTACAAGGCAGATGTGTTTCACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATATAAGCCATGAATCTGATGCCTTACAAGGCAGATGTGTTTCACATA  750

seq1  TTGAGATGGTGCCTAGTTTCATTCTGTGATAACAACAATAAACCCTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATGGTGCCTAGTTTCATTCTGTGATAACAACAATAAACCCTAATC  800

seq1  AGAGGCCG-TTTAGGGGAGGAAAGGGTTTA-TTTAGTCTTACACTTCCAT  848
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  AGAGGCCGTTTTAGGGGAGGAAAGGGTTTATTTTAGTCTTACACTTCCAT  850

seq1  A-TTATGATTT--ATCA-TTGAAGAAAGTTGGGGTAAGCAATCAAGGCAG  894
      | |||||||||   ||| ||||||||||||||||||||||||||||||||
seq2  ATTTATGATTTTATTCATTTGAAGAAAGTTGGGGTAAGCAATCAAGGCAG  900

seq1  G-AACCTGAAGGCAGGCCTGCTTGCTACTCCAGA-CCACACTACCTCTAA  942
      | |||||||||||||||||||||||||||||||| |||||||||||||| 
seq2  GAAACCTGAAGGCAGGCCTGCTTGCTACTCCAGATCCACACTACCTCTAT  950

seq1  CCAGGGAACTCACACACAGG-CAAGGAAGTACACCAGGAACCAGGCAGAA  991
      |  ||||||||||||||||| |||||||||||||||||||||||||||||
seq2  CAGGGGAACTCACACACAGGCCAAGGAAGTACACCAGGAACCAGGCAGAA  1000

seq1  ATGCTGCTTGCA-CATTT--CTGGATTAC--TCGCAGGCT-CATGCTCAG  1035
      ||||||| |||| |||||   ||||||||   |||||||| |||||||||
seq2  ATGCTGC-TGCACCATTTTCTTGGATTACCTCCGCAGGCTCCATGCTCAG  1049

seq1  CTAGC-TTTCTT-ATACAG-ACCAAGA  1059
      ||||| |||||| |||||| |||||||
seq2  CTAGCTTTTCTTAATACAGAACCAAGA  1076

seq1: chr7_120965236_120966310
seq2: B6Ng01-226C18.g_69_1133 (reverse)

seq1  AACAGTTGAGGTTATGTCTCCTTTACTTTTCTGTCTTTGTAAA-CTTTTC  49
      ||||||||||  ||||||| |||||||||   ||| ||||||| ||||||
seq2  AACAGTTGAG--TATGTCT-CTTTACTTT--CGTC-TTGTAAACCTTTTC  44

seq1  CATAAAAAGCTTGCTGTTTGGAACAATA-TAAGCCA-GATCTTTAATATT  97
      |||||||||| ||||| ||||||||||| ||||||| ||||||  ||| |
seq2  CATAAAAAGC-TGCTG-TTGGAACAATATTAAGCCAGGATCTT--ATA-T  89

seq1  AAGAAATCTACCTTGAAAGCCCTTTCTTAAAAGACAGAAGTATCTATCTT  147
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  AAGAAATCTACCTTGAAAGCCCTTTCTAAAAAGACAGAAGTATCTATCTT  139

seq1  TCCTTCAGTGATTTTCAAATGAAAATAACAAAACAAACAAGCAATAACAA  197
      ||||||||||||||||||||||||||||||||   |||||||||||||||
seq2  TCCTTCAGTGATTTTCAAATGAAAATAACAAA--CAACAAGCAATAACAA  187

seq1  CTCCCCGGTGAGGGCTGGGAAGATGGCTGGGAAATTAGGAGCACTGGCTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCGGTGAGGGCTGGGAAGATGGCTGGGAAATTAGGAGCACTGGCTA  237

seq1  CTCTTGAAGAGCACCTGAGTTCAGTTCCCAGCACCCACAAAGTGGTTGAC  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTGAAGAGCACCTGAGTTCAGTTCCCAGCACCCACAAAGTGGTTGAC  287

seq1  AACCTTCTTACTGCCTAGAGACTTGGTATTCTCTTCTGATGTCTGAGGGA  347
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCTCTTACTGCCTAGAGACTTGGTATTCTCTTCTGATGTCTGAGGGA  337

seq1  AGCTCACATATATGGTACACAGACATACATGCAGGAAAACACACAGATAA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCACATATATGGTACACAGACATACATGCAGGAAAACACACAGATAA  387

seq1  AATAAAAGCAAAGATAAACCCTGCAAGGGCTCAAATGATAGTAATAGGTA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAAGCAAAGATAAACCCTGCAAGGGCTCAAATGATAGTAATAGGTA  437

seq1  ATATAATGGGTGGCATTATTTTCTTTGGATTTTTTCAGATTTTATTGTAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATAATGGGTGGCATTATTTTCTTTGGATTTTTTCAGATTTTATTGTAG  487

seq1  TTAAAAATTTGATCCTAGGAAGACTCAACAACAATTAATTCTGTTTAATC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAATTTGATCCTAGGAAGACTCAACAACAATTAATTCTGTTTAATC  537

seq1  GTACATTAATTTCAGAAAAACTAAAGATATAAAATGTAGGCACTAAGGAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACATTAATTTCAGAAAAACTAAAGATATAAAATGTAGGCACTAAGGAT  587

seq1  AATCACAGTAGTCTCCAATTATAAACAACATATGCTCAACACTTTAATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAGTAGTCTCCAATTATAAACAACATATGCTCAACACTTTAATTT  637

seq1  TTATTAGTTAAATGAATAAAGTGGACTATGTTTCAGCCAAGAGCAATCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTAGTTAAATGAATAAAGTGGACTATGTTTCAGCCAAGAGCAATCTT  687

seq1  ACTGAGATTATATACTGAATGGAAAAGAAAGATGGTTATGATATATTGCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGATTATATACTGAATGGAAAAGAAAGATGGTTATGATATATTGCA  737

seq1  GAATGGAACAAGATATCTGAAAGGCAGATTATGAGATAGGAAGTACAATA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGGAACAAGATATCTGAAAGGCAGATTATGAGATAGGAAGTACAATA  787

seq1  AAATCCTGCATCTAGAAATGTGTGTGTATGCATATATATATACATATATG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCTGCATCTAGAAATGTGTGTGTATGCATATATATATACATATATG  837

seq1  AAGCAAATACATACTGTACATGTATATGTGTATGAAAAGATATAAACAAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAATACATACTGTACATGTATATGTGTATGAAAAGATATAAACAAG  887

seq1  CATCAAGAACTGCTGTATTGCAATACAATAACAAGTAGTATCTCTGTCTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAAGAACTGCTGTATTGCAATACAATAACAAGTAGTATCTCTGTCTG  937

seq1  TCTGTCTGTCTGTCTCTGCCTTCGGATTTTCCTGTAATGAACTGTTGCTG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTGTCTGTCTCTGCCTTCGGATTTTCCTGTAATGAACTGTTGCTG  987

seq1  CTAGCACAGTAATAAGGGTCATTCCTGTCTATGTAGGATGTCTCCTGGGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCACAGTAATAAGGGTCATTCCTGTCTATGTAGGATGTCTCCTGGGT  1037

seq1  TAGTCAACTCCTGGTATTGAGAGAATTC  1075
      ||||||||||||||||||||||||||||
seq2  TAGTCAACTCCTGGTATTGAGAGAATTC  1065