BAC Information

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BAC

Clone NameB6Ng01-228C13
Chromosome7 (Build37)
Map Location 124,245,303 - 124,246,307
singlet/doubletsinglet
Overlap genenone
Upstream gene1110004F10Rik, Plekha7, Rps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228C13.bB6Ng01-228C13.g
ACCGA041639GA041640
length4121,015
definitionB6Ng01-228C13.b B6Ng01-228C13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
caacaagtgcttactgacagaagcctgtatagctgtctccagaaaggctc
ttccagtgcctgacaaatacagaggtggatgctcacagccatccattgga
cagagcacaggatccccaatgaaggagctagagaaaagacccaaggagct
gaaggggttagcagccctataggagaaacaacaatatgaattaaccagta
ttcccagaactcccagggactaaatcatcaacaaaagagtacacatggtg
ggactcatggctccagctgcatatgtagcagaggatggcctagtcagtca
tcaatgggaggagaggtccttgatcctgtgaaggctctctgccccagtat
agggcaatgccaggaccagaaagcagatgtgggtgggttggtgagcaggg
ggagagggaggg

gaattcttaatatcctcagagttccacaatcatgtacacatttgtgcacc
ctgactatacagaacacacacacacacacacacacacacacacacacaca
cacacacgtgcatgcacgaacacacatgcacacagttgtgtgcaagtcgc
atacacatgaaaagaagaaagaggaaaaatggccagaatttaacaatttg
tactctgcaaagtcacctatcactggtttctttcctccttcccttccttc
ctccaaacttccttgtcattccagtggggcttaagtagttacattaggca
gggttctctagaaatgcagcatcagcaatatatgcaggctggtggagtta
ttggatggttttagaccatggtatctggatgggggaagggtagagaaccg
aggagatgctcagtctgagaaactgggcacctctgcagtcacaatctgag
gctgaatgcctggaaacttcttggagagtgcgtggtgttaaatccacatg
gagaggccacagaagctggagtctgacttccccaggtgacagcagcagtg
acaggcaccacagtgacagacgtatttgctcaggcagaatggagctggca
catgaacttcctctttcttccaacatttttcctatccaggccctcagctg
aatgggtggtgctgttcgtgtgtatagcggtcctctttcactcagttgct
gtcacacatgtcagtctcctcgggggaatcccttggcagacatgcacaga
ggtgctttcagtagttcctagacatctctcaaccaggtcagccatcacag
gaggggagcagattgcagcgatctctgcttttgcctctttcaaacccgag
cccttgatggggagagttcccttgaggtgagggaagtccttttgctgaac
atcaacagaggtttgaagcgcaagtcatagtcttgtgtgatgatttctca
gtgtacttttgacatttgttcccatccccaaggagagttgttgacctaag
aatgggtaagcattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124245303_124246307
seq2: B6Ng01-228C13.g_68_1082 (reverse)

seq1  CAATGCTTA-CCATTCTTAGGTC-ACAACTCTTCCTTTGGGGATGGGAAC  48
      ||||||||| ||||||||||||| ||||||||  | ||||||||||||||
seq2  CAATGCTTACCCATTCTTAGGTCAACAACTCT--CCTTGGGGATGGGAAC  48

seq1  AAATGTCAAAGTGACACTGAG-AATCATCACACAGGACTATGAC-TGCAC  96
      ||||||||||   |||||||| |||||||||||| ||||||||| ||| |
seq2  AAATGTCAAAAGTACACTGAGAAATCATCACACAAGACTATGACTTGCGC  98

seq1  TTC-AACCTCTGTTGGATGTTCAGC-AAAGGACTTCCCTCACCTC-AGGG  143
      ||| |||||||||| |||||||||| ||||||||||||||||||| ||||
seq2  TTCAAACCTCTGTT-GATGTTCAGCAAAAGGACTTCCCTCACCTCAAGGG  147

seq1  AACTCT-CCCATC-AGGGCTCGGGTTTGAAAGAGGC-AAAGCAGAGATCG  190
      |||||| |||||| |||||||||||||||||||||| |||||||||||||
seq2  AACTCTCCCCATCAAGGGCTCGGGTTTGAAAGAGGCAAAAGCAGAGATCG  197

seq1  CTTGCATTCTGCTCCCCTCCTGTGATGGCTGACCTGGTTGAGAGATGTCT  240
      | |||| |||||||||||||||||||||||||||||||||||||||||||
seq2  C-TGCAATCTGCTCCCCTCCTGTGATGGCTGACCTGGTTGAGAGATGTCT  246

seq1  AGG-ACTACTGAAAGCACCTCTGTGCATGTCTGCCAAGGGATT-CCCCGA  288
      ||| ||||||||||||||||||||||||||||||||||||||| ||||||
seq2  AGGAACTACTGAAAGCACCTCTGTGCATGTCTGCCAAGGGATTCCCCCGA  296

seq1  GGAGACTGACATGTGTGACAGCAACTGAGTG-AAGAGGACCGCTATACAC  337
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GGAGACTGACATGTGTGACAGCAACTGAGTGAAAGAGGACCGCTATACAC  346

seq1  ACGAACAGCACCACCCATTCAGCTGAGGGCCTGGATAGGAAAAATGTTGG  387
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGAACAGCACCACCCATTCAGCTGAGGGCCTGGATAGGAAAAATGTTGG  396

seq1  AAG-AAGAGGAAGTTCATGTGCCAGCTCCATTCTGCCTGAGCAAATACGT  436
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAGAGGAAGTTCATGTGCCAGCTCCATTCTGCCTGAGCAAATACGT  446

seq1  CTGTCACTGTGGTGCCTGTCACTGCTGCTGTCACCTGGGGAAGTCAGACT  486
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTGTGGTGCCTGTCACTGCTGCTGTCACCTGGGGAAGTCAGACT  496

seq1  CCAGCTTCTGTGGCCTCTCCATGTGGATTTAACACCACGCACTCTCCAAG  536
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTTCTGTGGCCTCTCCATGTGGATTTAACACCACGCACTCTCCAAG  546

seq1  AAGTTTCCAGGCATTCAGCCTCAGATTGTGACTGCAGAGGTGCCCAGTTT  586
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTCCAGGCATTCAGCCTCAGATTGTGACTGCAGAGGTGCCCAGTTT  596

seq1  CTCAGACTGAGCATCTCCTCGGTTCTCTACCCTTCCCCCATCCAGATACC  636
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGACTGAGCATCTCCTCGGTTCTCTACCCTTCCCCCATCCAGATACC  646

seq1  ATGGTCTAAAACCATCCAATAACTCCACCAGCCTGCATATATTGCTGATG  686
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTCTAAAACCATCCAATAACTCCACCAGCCTGCATATATTGCTGATG  696

seq1  CTGCATTTCTAGAGAACCCTGCCTAATGTAACTACTTAAGCCCCACTGGA  736
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCATTTCTAGAGAACCCTGCCTAATGTAACTACTTAAGCCCCACTGGA  746

seq1  ATGACAAGGAAGTTTGGAGGAAGGAAGGGAAGGAGGAAAGAAACCAGTGA  786
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAAGGAAGTTTGGAGGAAGGAAGGGAAGGAGGAAAGAAACCAGTGA  796

seq1  TAGGTGACTTTGCAGAGTACAAATTGTTAAATTCTGGCCATTTTTCCTCT  836
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGACTTTGCAGAGTACAAATTGTTAAATTCTGGCCATTTTTCCTCT  846

seq1  TTCTTCTTTTCATGTGTATGCGACTTGCACACAACTGTGTGCATGTGTGT  886
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTTTTCATGTGTATGCGACTTGCACACAACTGTGTGCATGTGTGT  896

seq1  TCGTGCATGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  936
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGCATGCACGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGT  946

seq1  GTGTGTTCTGTATAGTCAGGGTGCACAAATGTGTACATGATTGTGGAACT  986
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGTTCTGTATAGTCAGGGTGCACAAATGTGTACATGATTGTGGAACT  996

seq1  CTGAGGATATTAAGAATTC  1005
      |||||||||||||||||||
seq2  CTGAGGATATTAAGAATTC  1015


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