BAC Information

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BAC

Clone NameB6Ng01-228K22
Chromosome7 (Build37)
Map Location 106,540,361 - 106,541,406
singlet/doubletsinglet
Overlap geneGdpd5
Upstream geneLOC100040269, Gucy2d, LOC100040721, EG434215, A630091E08Rik, 2210018M11Rik, LOC100040769, Prkrir, Wnt11, LOC666978, Uvrag, EG666529, Dgat2, Mogat2, Mtap6, Serpinh1
Downstream gene2810406K13Rik, Rps3, Rnu15-b, EG449630, Arrb1, EG245190, Slco2b1, Olfr520, Olfr521, Neu3, Spcs2, Xrra1, EG330602, Chrdl2, Pold3, 2610209A20Rik, Kcne3, LOC631577, Pgm2l1, Gpx2-ps1, P4ha3, Ppme1, AU020772
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-228K22.bB6Ng01-228K22.g
ACCGA042036GA042037
length1871,058
definitionB6Ng01-228K22.b B6Ng01-228K22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
taaggatgatgggcagggctttgttgctatagcaagagataacacaacag
acttagaatttccttgtttctttgtgttgggccttgcctctgaaggtaga
agtcttccatgcctggatacctctcttgagctcagtgcaaggtggaggac
tcccttttcttagcaggaagtgtggggagtggggagg
gaattccccacagtctgagaggaacatttgtgagagaggtgacgagggta
agttctggaagccgacctgcccaggactccaccttgactcccatctcctg
gtggatcccagattcgtcatctgaggaagaggcagtcttcactcacacac
ccagctggagaccttgtgcgggctgagggagcgagggagaggatgtttgt
cctgcgcctggtgcagtttttgtggtttttaccgaggacggcctcacttt
acagacgaaagggtggagagtcaaagaaaggtgatcgaccgcctgaggcc
acgcagtggtgtggtttcgtcctccaggcttccagtctgtggggacttgt
ttatttttcctacaaaaccttgcttttaccctcaagtgacctgctgcctc
ctttactcagaaccttctctgtgtggcgcagctgcttgctgtggcctctt
gtctagagtgccaaacagcacttgcctggaacatagtaggcacttccaaa
atgtcctgtgcatgccaagtggtgggtgtgcatgaagatgtcttctggag
ggtgaaggcccgagccatgctcagaagtttcctctgcctcttacacctgt
gaaaccatttgtgtcgcttatatggaaccttcaggaaagagcatgaagcc
tgggatagggaaatggtttgcttcctgtgcaaagtgggctggtcatcttg
taaggatgggctgtacagaagtttgcccccttttccaagtgcccgctcct
atgactgtacctgctcagctctacgttttgactctagtcttcccatccct
tcatcctgatgtccacaaagctgcctcctgctgcctcctgctcccctgtc
ttcccccttgtgcttgcctgagtgtcttttctaagtggctgctgttatta
gcccttccttcactcactcctagccagcccagcctcttggttaccctggg
ccttttctggagagtccatccatcctgcagagacttcttgcagcagctat
gctttggtcatggccattggtccacacccttcttggcagaaagacctgga
aatcgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_106540361_106541406
seq2: B6Ng01-228K22.g_71_1128

seq1  GAATTCCCCACAGTCTGAGAGGAACATTTGTGAGAGAGGTGACGAGGGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCCCACAGTCTGAGAGGAACATTTGTGAGAGAGGTGACGAGGGTA  50

seq1  AGTTCTGGAAGCCGACCTGCCCAGGACTCCACCTTGACTCCCATCTCCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCTGGAAGCCGACCTGCCCAGGACTCCACCTTGACTCCCATCTCCTG  100

seq1  GTGGATCCCAGATTCGTCATCTGAGGAAGAGGCAGTCTTCACTCACACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGATCCCAGATTCGTCATCTGAGGAAGAGGCAGTCTTCACTCACACAC  150

seq1  CCAGCTGGAGACCTTGTGCGGGCTGAGGGAGCGAGGGAGAGGATGTTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCTGGAGACCTTGTGCGGGCTGAGGGAGCGAGGGAGAGGATGTTTGT  200

seq1  CCTGCGCCTGGTGCAGTTTTTGTGGTTTTTACCGAGGACGGCCTCACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCGCCTGGTGCAGTTTTTGTGGTTTTTACCGAGGACGGCCTCACTTT  250

seq1  ACAGACGAAAGGGTGGAGAGTCAAAGAAAGGTGATCGACCGCCTGAGGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGACGAAAGGGTGGAGAGTCAAAGAAAGGTGATCGACCGCCTGAGGCC  300

seq1  ACGCAGTGGTGTGGTTTCGTCCTCCAGGCTTCCAGTCTGTGGGGACTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGTGGTGTGGTTTCGTCCTCCAGGCTTCCAGTCTGTGGGGACTTGT  350

seq1  TTATTTTTCCTACAAAACCTTGCTTTTACCCTCAAGTGACCTGCTGCCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTTCCTACAAAACCTTGCTTTTACCCTCAAGTGACCTGCTGCCTC  400

seq1  CTTTACTCAGAACCTTCTCTGTGTGGCGCAGCTGCTTGCTGTGGCCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACTCAGAACCTTCTCTGTGTGGCGCAGCTGCTTGCTGTGGCCTCTT  450

seq1  GTCTAGAGTGCCAAACAGCACTTGCCTGGAACATAGTAGGCACTTCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTAGAGTGCCAAACAGCACTTGCCTGGAACATAGTAGGCACTTCCAAA  500

seq1  ATGTCCTGTGCATGCCAAGTGGTGGGTGTGCATGAAGATGTCTTCTGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCTGTGCATGCCAAGTGGTGGGTGTGCATGAAGATGTCTTCTGGAG  550

seq1  GGTGAAGGCCCGAGCCATGCTCAGAAGTTTCCTCTGCCTCTTACACCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAAGGCCCGAGCCATGCTCAGAAGTTTCCTCTGCCTCTTACACCTGT  600

seq1  GAAACCATTTGTGTCGCTTATATGGAACCTTCAGGAAAGAGCATGAAGCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCATTTGTGTCGCTTATATGGAACCTTCAGGAAAGAGCATGAAGCC  650

seq1  TGGGATAGGGAAATGGTTTGCTTCCTGTGCAAAGTGGGCTGGTCATCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATAGGGAAATGGTTTGCTTCCTGTGCAAAGTGGGCTGGTCATCTTG  700

seq1  TAAGGATGGGCTGTACAGAAG-TTGCCCCC-TTTCCAAGTGCCCGCTCCT  748
      ||||||||||||||||||||| |||||||| |||||||||||||||||||
seq2  TAAGGATGGGCTGTACAGAAGTTTGCCCCCTTTTCCAAGTGCCCGCTCCT  750

seq1  ATGACTGTACCTGCTCAGCTCTACGTTTTGACTCTAGTCTTCCCATCCCT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACTGTACCTGCTCAGCTCTACGTTTTGACTCTAGTCTTCCCATCCCT  800

seq1  TCATCCTGATGTCCACAAAGCTGCCTCCTGCTGCCTCCTGCTCCCCTGTC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCCTGATGTCCACAAAGCTGCCTCCTGCTGCCTCCTGCTCCCCTGTC  850

seq1  TTCCCCCTTGTGCTTGCCTGAGTGTCTTTTCTAAGTGGCTGCTGTTATTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCTTGTGCTTGCCTGAGTGTCTTTTCTAAGTGGCTGCTGTTATTA  900

seq1  G-CCTTCCTTCACTCACTCCTAGCCAG-CCAGCCTCT--GGTACCCTGGG  944
      | ||||||||||||||||||||||||| |||||||||  | |||||||||
seq2  GCCCTTCCTTCACTCACTCCTAGCCAGCCCAGCCTCTTGGTTACCCTGGG  950

seq1  CC-TTTCTGGAGAGTCCATCCATCCTGCAGGAGGACCTC-TGCAGCAGCT  992
      || |||||||||||||||||||||||||||   ||| || ||||||||||
seq2  CCTTTTCTGGAGAGTCCATCCATCCTGCAG--AGACTTCTTGCAGCAGCT  998

seq1  ATGC-TTGGTCA-GGGCAT--GGCCACACCCTTC-TGGCAG-AAGACAGG  1036
      |||| ||||||| || |||  | ||||||||||| |||||| |||||  |
seq2  ATGCTTTGGTCATGGCCATTGGTCCACACCCTTCTTGGCAGAAAGACCTG  1048

seq1  GAAATCGTGA  1046
      ||||||||||
seq2  GAAATCGTGA  1058