BAC Information

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BAC

Clone NameB6Ng01-230O06
Chromosome7 (Build37)
Map Location 95,072,600 - 95,073,751
singlet/doubletsinglet
Overlap geneGrm5
Upstream geneLOC637896, EG621430, LOC621477, Nox4, Tyr
Downstream geneCtsc, LOC100039756, Rab38, LOC100039924, LOC666598, EG621562
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-230O06.bB6Ng01-230O06.g
ACCGA043635GA043636
length1,151712
definitionB6Ng01-230O06.b B6Ng01-230O06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttcatggtctgtgtcatagaagaattttacactttataaagag
tttcttgggtcttcttgaaagatggtctcaccactggttggtcggtcttt
cttgatgttgagaatgctacttggaacctgagtctattatctcctggaca
cactggctttcagatttctattgtcctaaatacttttcctggttctaagg
tcaaatttctctccctcagtctagaagtattctccttgccagatttcagt
ttatggtcccataacagttactctgagtgtctcaagactgaagttcacag
aaggtcttgagttgccctgttccagctcagcaggagtcttttgaaaatcc
tgtctttcctcagcaggagtccttgtaactagaagtctccctgctgctct
actccagtgcctagaatagagcattttcctggcatctttcttctctcagc
tgatattgtgtgcatcctttctcttttctctttttatcttatttgttctc
aataaaatgtctattgacaagagtgtagtgctgattttccatagctctct
gccatgatggcttggatgacactctgtcactgggatgggttgatttccag
ctttttaaaatagctgaatacaattgtagttttaaatgtttatccattga
gaaacattaggctggttcctcttctcagctactctgaatggttgcagcaa
taaaaatagacttgggtaaagcattcgccatgtcagcctaacaaactaac
aagcctaacaaggtttcagatccttagaaccaaagcaaaaatccagatgt
agtattgcaaacacctattatcccattcttcatccacgaagagatgggaa
gcaaagttgcttttaaacgtctgagcaagctagactagcatatgcagggg
aaaaaaaaaacaaaaaacaaaaacagagttcttgtctcaggacaggatgg
aaagttgacgactgacaattgaggttattttcccaattttcttgatggaa
catggcagatatgtacctcaaaatgggacacaacatgaatacacacacta
caccacacacactcggcatcacacatttccacctggagagagggcaagat
tagagagaagcttatagctgttcagcatactagtaagttccatatatatt
t

gaattcaatatacattattgagcatgaactccatttaaggtaatgaggct
gcaccatggtgaggtaaagaaagtcatttgtttctttagagaaccttccc
agtgcttagctttgtgatctcagggctggacactctcccgggttctttag
agggatgtttcagtccttcttagaaggggaaacaaaatattcacgggagg
aaatacaaactgtggagcagactgaaagaaagatcatctagagactgccc
cacctggggatccattccatatacaggcaccacacccagacactattgca
gatgccaagaagtgctttctgacaggagcatgatatagctgtctcctgag
aggctatgtcagagcctgacaaacactgaggtggatgctctcagtcaacc
actggactgagcacaagcccctcaaatggaggacttagagaaagacctaa
aggagctgaagggatttgcaaccccataggaagaacaatatcagccaacc
agacctctcagagctcccagggaccaaaccaccaaccaagaagtacacat
ggagggacccggagctccagccacatatgtagcagaagatggtcttgttg
ggcatcaatggaaggagagacccttggtcctgtgaaggctcagtgccaca
gtataggggaatgccagggagaggagatgggagtgagtggatgggtctgg
gatcactctcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95072600_95073751
seq2: B6Ng01-230O06.b_45_1195

seq1  GAATTCCTTCATGGTCTGTGTCATAGAAGAATTTTACACTTTATAAAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTCATGGTCTGTGTCATAGAAGAATTTTACACTTTATAAAGAG  50

seq1  TTTCTTGGGTCTTCTTGAAAGATGGTCTCACCACTGGTTGGTCGGTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTGGGTCTTCTTGAAAGATGGTCTCACCACTGGTTGGTCGGTCTTT  100

seq1  CTTGATGTTGAGAATGCTACTTGGAACCTGAGTCTATTATCTCCTGGACA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGATGTTGAGAATGCTACTTGGAACCTGAGTCTATTATCTCCTGGACA  150

seq1  CACTGGCTTTCAGATTTCTATTGTCCTAAATACTTTTCCTGGTTCTAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCTTTCAGATTTCTATTGTCCTAAATACTTTTCCTGGTTCTAAGG  200

seq1  TCAAATTTCTCTCCCTCAGTCTAGAAGTATTCTCCTTGCCAGATTTCAGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATTTCTCTCCCTCAGTCTAGAAGTATTCTCCTTGCCAGATTTCAGT  250

seq1  TTATGGTCCCATAACAGTTACTCTGAGTGTCTCAAGACTGAAGTTCACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGTCCCATAACAGTTACTCTGAGTGTCTCAAGACTGAAGTTCACAG  300

seq1  AAGGTCTTGAGTTGCCCTGTTCCAGCTCAGCAGGAGTCTTTTGAAAATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTTGAGTTGCCCTGTTCCAGCTCAGCAGGAGTCTTTTGAAAATCC  350

seq1  TGTCTTTCCTCAGCAGGAGTCCTTGTAACTAGAAGTCTCCCTGCTGCTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTTCCTCAGCAGGAGTCCTTGTAACTAGAAGTCTCCCTGCTGCTCT  400

seq1  ACTCCAGTGCCTAGAATAGAGCATTTTCCTGGCATCTTTCTTCTCTCAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCAGTGCCTAGAATAGAGCATTTTCCTGGCATCTTTCTTCTCTCAGC  450

seq1  TGATATTGTGTGCATCCTTTCTCTTTTCTCTTTTTATCTTATTTGTTCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATTGTGTGCATCCTTTCTCTTTTCTCTTTTTATCTTATTTGTTCTC  500

seq1  AATAAAATGTCTATTGACAAGAGTGTAGTGCTGATTTTCCATAGCTCTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAATGTCTATTGACAAGAGTGTAGTGCTGATTTTCCATAGCTCTCT  550

seq1  GCCATGATGGCTTGGATGACACTCTGTCACTGGGATGGGTTGATTTCCAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATGATGGCTTGGATGACACTCTGTCACTGGGATGGGTTGATTTCCAG  600

seq1  CTTTTTAAAATAGCTGAATACAATTGTAGTTTTAAATGTTTATCCATTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTAAAATAGCTGAATACAATTGTAGTTTTAAATGTTTATCCATTGA  650

seq1  GAAACATTAGGCTGGTTCCTCTTCTCAGCTACTCTGAATGGTTGCAGCAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACATTAGGCTGGTTCCTCTTCTCAGCTACTCTGAATGGTTGCAGCAA  700

seq1  TAAAAATAGACTTGGGTAAAGCATTCGCCATGTCAGCCTAACAAACTAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAGACTTGGGTAAAGCATTCGCCATGTCAGCCTAACAAACTAAC  750

seq1  AAGCCTAACAAGGTTTCAGATCCTTAGAACCAAAGCAAAAATCCAGATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTAACAAGGTTTCAGATCCTTAGAACCAAAGCAAAAATCCAGATGT  800

seq1  AGTATTGCAAACACCTATTATCCCATTCTTCATCCACGAAGAGATGGGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTGCAAACACCTATTATCCCATTCTTCATCCACGAAGAGATGGGAA  850

seq1  GCAAAGTTGC-TTTAAACGTCTGAGCAAGCTAGACTAGCATATGCAGGGG  899
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCAAAGTTGCTTTTAAACGTCTGAGCAAGCTAGACTAGCATATGCAGGGG  900

seq1  AAAAAAAAAACAAAAAACAAAAACAAGAGTTCTTGTCTCAGGACAGGATG  949
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  AAAAAAAAAACAAAAAACAAAAAC-AGAGTTCTTGTCTCAGGACAGGATG  949

seq1  GAAAG-TGACGACTGACAATTGAGGTTATTTT-CCAATTTTC-TGATAGA  996
      ||||| |||||||||||||||||||||||||| ||||||||| |||| ||
seq2  GAAAGTTGACGACTGACAATTGAGGTTATTTTCCCAATTTTCTTGATGGA  999

seq1  ACATGGCAGATATGTACCTTCAAAATGGAACACAAACATGAATACACACA  1046
      |||||||||||||||||| ||||||||| |||| ||||||||||||||||
seq2  ACATGGCAGATATGTACC-TCAAAATGGGACAC-AACATGAATACACACA  1047

seq1  C-ACACACACACACACACACGCA-CACACATTCACACAGGGAGAGAGGGA  1094
      | |||| ||||||||| |  ||| ||||||||  |||  |||||||||| 
seq2  CTACAC-CACACACACTC-GGCATCACACATTTCCACCTGGAGAGAGGGC  1095

seq1  AAGATATAGAGAG-AGCTATAAGCCTGTCAGCATACTAGTAAGTTTCAAT  1143
      ||||| ||||||| ||||   |||   |||||||||||||||||| ||  
seq2  AAGAT-TAGAGAGAAGCTTATAGCTGTTCAGCATACTAGTAAGTTCCA--  1142

seq1  TATATATTT  1152
      |||||||||
seq2  TATATATTT  1151


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