BAC Information

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BAC

Clone NameB6Ng01-231M12
Chromosome7 (Build37)
Map Location 15,482,198 - 15,483,091
singlet/doubletsinglet
Overlap genenone
Upstream geneEG434121, EG629203, LOC677512, EG629219, EG434123, 2810007J24Rik, EG638251, B430211C08Rik, EG194588, LOC666352, EG666312
Downstream geneLOC666365, LOC671978, LOC100042677, LOC100042685, EG666381, LOC100042691, LOC100042702, LOC100042707, LOC100042711, LOC100042714, LOC100042717, LOC100042721, LOC100042728, LOC100042731, LOC100042735, LOC100042739, LOC100042742, LOC235841, EG666407, LOC666337, Obox2, LOC100042753, LOC100042756, LOC100042758, EG545921, LOC100042762, Obox1, LOC100042765, Obox3, LOC100042771, Obox5, EG638338, Obox6, Crx, Crxos1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-231M12.bB6Ng01-231M12.g
ACCGA044285GA044286
length894832
definitionB6Ng01-231M12.b B6Ng01-231M12.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctgaactttccaagacttttatcatggatgggtgttggattttg
tcaaatgctttctcagcatctaacaagatgttcatgtggtttttgtcctt
gactttgtttagatagtggattttattgatggatttttttatataaaacc
atccctgtatccctgggatgaagcctacttgatcacgatgcatcatcatt
ttgatgtgttcttggatttggtttgtgaggattttattgagaattttttt
attttttaaaattttttattagatattttctttatttacatttcaaatgc
tatcctgaaagtcccctatacactccccatgccctgcttccctacccacc
cacttccacttcttggtcctagcaatcccctgtattggggcaaataaagt
atgcaagaccaaggggcctgtcttcccaaagatggccgactaggccatct
tctgctacaaatgcagctagagacactagctctgggagtactggttagtt
catattgttgttccacctaatgggttatttaaagattgttcaacactgaa
tataagaaacatcctgttgtgtaagcaccatggtcaggtcattaactgtt
ggcttaatggacacaattttagattctcagcctctttctctatctgtcgt
ctgtttgtctgtcgtcttctctctctattcctgtgtatgtttgtctttgt
atgtttcagagtatggtttatttaattctctatttaccctatatatatga
aaatagcaaacacaactaagagcagtaaagggaagaaaatggccaacctc
agggctggaatcaaacaataagaaagtaagggaaccagtacagggaacgc
cagggccaaaaaaaatgagaatgtgtgggtagggagtggggggg
gaattcagttcttgaacacaaatattgaaatattaatctgttatatatat
atatatatatatatatatatatatatatatatatatggtaattatttcat
ttaaatttccaatgctatcccaaaagtcccccacccgctcccccatccac
tcccccacccacccactcccacttcttggcccttctttttttaaattggt
ttttaatgtgttttagttctgtaatgaaatttatgtcttgatctattttt
taaatgtctagatgaataaaatctataatcattaaaaatgagtctctttt
atgataacactgtgttattattgtcattactcagtgtgtaagtgctagag
gtgagatcttccacagttcttttattgttcaggagagttttacatatcct
ggaggttttatctttccataactaagtggaaattgtcctctcaagatctt
tgtcttggcattttattgggatcgcattgaatcagtagaatcaatatgga
ggtggatgctcacagtcaaccaaccattggactgagcacagagtccccag
tggaggagttaaaggactgaaggagatgaaggggcttgaaacacatagga
agaaaaacagtatcaaaccaaacagactcccgcagagctaccagggacta
aactaccaaccaaagagtatacatggagggacccatagctccatcctcaa
tgtagcagaggatggccttgttgagcattaatggaaagagaggtccttgg
acctgtgaaaggctcgatgcctcagtgtaggtgaacatgaggacagggag
gcaggagttgggtgggatgggtagtggaactt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_15482198_15483091
seq2: B6Ng01-231M12.b_43_936

seq1  GAATTCCTGAACTTTCCAAGACTTTTATCATGGATGGGTGTTGGATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTGAACTTTCCAAGACTTTTATCATGGATGGGTGTTGGATTTTG  50

seq1  TCAAATGCTTTCTCAGCATCTAACAAGATGTTCATGTGGTTTTTGTCCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAATGCTTTCTCAGCATCTAACAAGATGTTCATGTGGTTTTTGTCCTT  100

seq1  GACTTTGTTTAGATAGTGGATTTTATTGATGGATTTTTTTATATAAAACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTGTTTAGATAGTGGATTTTATTGATGGATTTTTTTATATAAAACC  150

seq1  ATCCCTGTATCCCTGGGATGAAGCCTACTTGATCACGATGCATCATCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCTGTATCCCTGGGATGAAGCCTACTTGATCACGATGCATCATCATT  200

seq1  TTGATGTGTTCTTGGATTTGGTTTGTGAGGATTTTATTGAGAATTTTTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGTGTTCTTGGATTTGGTTTGTGAGGATTTTATTGAGAATTTTTTT  250

seq1  ATTTTTTAAAATTTTTTATTAGATATTTTCTTTATTTACATTTCAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTTAAAATTTTTTATTAGATATTTTCTTTATTTACATTTCAAATGC  300

seq1  TATCCTGAAAGTCCCCTATACACTCCCCATGCCCTGCTTCCCTACCCACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTGAAAGTCCCCTATACACTCCCCATGCCCTGCTTCCCTACCCACC  350

seq1  CACTTCCACTTCTTGGTCCTAGCAATCCCCTGTATTGGGGCAAATAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTCCACTTCTTGGTCCTAGCAATCCCCTGTATTGGGGCAAATAAAGT  400

seq1  ATGCAAGACCAAGGGGCCTGTCTTCCCAAAGATGGCCGACTAGGCCATCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAAGACCAAGGGGCCTGTCTTCCCAAAGATGGCCGACTAGGCCATCT  450

seq1  TCTGCTACAAATGCAGCTAGAGACACTAGCTCTGGGAGTACTGGTTAGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCTACAAATGCAGCTAGAGACACTAGCTCTGGGAGTACTGGTTAGTT  500

seq1  CATATTGTTGTTCCACCTAATGGGTTATTTAAAGATTGTTCAACACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTGTTGTTCCACCTAATGGGTTATTTAAAGATTGTTCAACACTGAA  550

seq1  TATAAGAAACATCCTGTTGTGTAAGCACCATGGTCAGGTCATTAACTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGAAACATCCTGTTGTGTAAGCACCATGGTCAGGTCATTAACTGTT  600

seq1  GGCTTAATGGACACAATTTTAGATTCTCAGCCTCTTTCTCTATCTGTCGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAATGGACACAATTTTAGATTCTCAGCCTCTTTCTCTATCTGTCGT  650

seq1  CTGTTTGTCTGTCGTCTTCTCTCTCTATTCCTGTGTATGTTTGTCTTTGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTGTCTGTCGTCTTCTCTCTCTATTCCTGTGTATGTTTGTCTTTGT  700

seq1  ATGTTTCAGAGTATGGTTTATTTAATTCTCTATTTA-CCTATATATATGA  749
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  ATGTTTCAGAGTATGGTTTATTTAATTCTCTATTTACCCTATATATATGA  750

seq1  AAATAGCAAACACAACTAAGAGCAGTAAAGGGAAGAAAATGGCCAACCTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAGCAAACACAACTAAGAGCAGTAAAGGGAAGAAAATGGCCAACCTC  800

seq1  AGGGCTGGAATCAAACAATAAGAAAGTAAGGGAACCAGTACAGGGAACGC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCTGGAATCAAACAATAAGAAAGTAAGGGAACCAGTACAGGGAACGC  850

seq1  CAGGGCCAAAAAAAATGAGAATGTGTGGGTAGGGAAGTGGGGGGG  894
      |||||||||||||||||||||||||||||||||| ||||||||||
seq2  CAGGGCCAAAAAAAATGAGAATGTGTGGGTAGGG-AGTGGGGGGG  894