BAC Information

Click to search

BAC

Clone NameB6Ng01-232M06
Chromosome7 (Build37)
Map Location 32,323,440 - 32,323,864
singlet/doubletsinglet
Overlap genenone
Upstream geneBC053749, Hspb6, 1810054G18Rik, Psenen, U2af1l4, Tmem149, Wbp7, Zbtb32, Upk1a, Cox6b1, Etv2, 3100004P22Rik, 2310022K01Rik, 4930479M11Rik, 2200002J24Rik, EG233075, Atp4a, Tmem147, Gapdhs, Sbsn, Dmkn, Krtdap, Ffar2, Ffar3, Ffar1, Cd22, Mag, Hamp2, Usf2-ps1, Hamp1, Usf2, LOC100043823, Lsr, Tmem162, Fxyd5, Fxyd7, Fxyd1, Lgi4, Fxyd3, Hpn, Scn1b, Gramd1a, LOC672598, LOC100043323, LOC100043827, Apbh, Abpe, LOC100043326, EG384585, LOC100043328, LOC100043331, LOC626181, LOC100043334
Downstream geneLOC100043834, LOC546947, LOC677233, LOC100043337, LOC546949, LOC100043836, EG626305, EG668342, EG626330, LOC100043340, LOC100043343, EG626358, LOC668351, EG384593, LOC100043351, LOC100043352, LOC100043353, EG384594, LOC100043838, EG668361, LOC668362, EG624584, LOC100043355, LOC546951, EG626740, EG668371, EG668377, LOC100043842, LOC634929, EG668379, EG668381, LOC668386, LOC626373, EG384589, EG668393, EG330689, LOC100043362, LOC100043365
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232M06.bB6Ng01-232M06.g
ACCGA045016GA045017
length4191,213
definitionB6Ng01-232M06.b B6Ng01-232M06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aattagtgaagccaatattattctgataccaagtcaaagacacaacataa
aatgaaaattataggctactcaatgatgaaaatagacacaatattctcag
caaagttgtgttgtactcagttaaagaacacgtcattccacagatggctc
aatgtatgaatatccacaagtgttgtcacagattcaaagggagaaaccac
aggagcacttaacaagcacaggctcctcttaaaatccagtatttcaccac
tgtttgtttgtttgtttgtttgtttgtttgtttgaagtgtatctttccat
gttggtcttgagctcataatcttactgagaaaagggtctctctctctctc
tctctctctctctctctctctctctctctctgtgtgtgtgtgtgtgtgtg
tgtgtgtgtgtgtgtgtgt
gaattcacagtgataatcaccgagtgaagttctttcatcttgtgtgagga
gccgccctcacagtagccgttacaagatggcactgacatccgttgctcgt
agtaaaatgtgcgcaggcatcagggtatctttccattacctgagccctga
ctggtagtgggtagccaatccgggtggtacacgactccaactgtttttcg
cagcctataaaagggaagggttttctgctctctgtgtctctttccctgaa
gctgatcatctatctctcgagatcttttaaagctgtactgcagaaggatc
tgagtggcctgtctgtgttttgctggcgagatggtagcctgggtcatctg
gtgccggaatccagggaattaacatcgctggcattgaggagaacccccgg
agatggggcggattcagaactgcagagaaaaggtaagtttggagagatat
atctgatcgtgaacctcttatcccttttgattttggtcttaatctagatg
caccctaagaatgggtagtagaagcgctagtcttggttgctatccatcga
ggttggtgctgaaatttgctatccatcgagggtggtgctgaaattttctg
tctattgaggctggtgctaaaattttaagtccattgaggttggtgctgaa
attttatttctgtccatcgaggctggtgctgttgtccatccaggatagtg
ctgaaattcttactattagtgcatcaaaatttgcagtccaatttcttaac
aggaatttcttaacaggaagcatcgtgatgaagaggcatcggcctgggaa
acactgacagtatcctccatctgggttccacacccatcaggggcagacac
atgctcatcaccagcaagatcagcttcttcattttgacagcgatgcacta
gctgcttcagaacccacactggctcctgcgcatttctgtggaaacataac
aaacagacccttctccgcccaggccaacacgggatctgggtccattccca
tgatcctgtaagcacattccttccaatttagcataacccaaagttacttg
gtctggtattagcaggtcgtttcagcagcagagccgatctgcttatccaa
ttgcaaaaattaaggtaaaagagctaggaagggaatacgtgatatacttc
tgactaaggaatctttcgccctcacaatatagccttccctatctccatat
attttggactgca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_32323440_32323864
seq2: B6Ng01-232M06.b_46_470 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACAGAGAGAGAGAG  50

seq1  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCTTTTCTCAGTAAGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACCCTTTTCTCAGTAAGA  100

seq1  TTATGAGCTCAAGACCAACATGGAAAGATACACTTCAAACAAACAAACAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCTCAAGACCAACATGGAAAGATACACTTCAAACAAACAAACAA  150

seq1  ACAAACAAACAAACAAACAGTGGTGAAATACTGGATTTTAAGAGGAGCCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAACAGTGGTGAAATACTGGATTTTAAGAGGAGCCT  200

seq1  GTGCTTGTTAAGTGCTCCTGTGGTTTCTCCCTTTGAATCTGTGACAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTTGTTAAGTGCTCCTGTGGTTTCTCCCTTTGAATCTGTGACAACAC  250

seq1  TTGTGGATATTCATACATTGAGCCATCTGTGGAATGACGTGTTCTTTAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGGATATTCATACATTGAGCCATCTGTGGAATGACGTGTTCTTTAAC  300

seq1  TGAGTACAACACAACTTTGCTGAGAATATTGTGTCTATTTTCATCATTGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTACAACACAACTTTGCTGAGAATATTGTGTCTATTTTCATCATTGA  350

seq1  GTAGCCTATAATTTTCATTTTATGTTGTGTCTTTGACTTGGTATCAGAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCCTATAATTTTCATTTTATGTTGTGTCTTTGACTTGGTATCAGAAT  400

seq1  AATATTGGCTTCACTAATTGAATTC  425
      |||||||||||||||||||||||||
seq2  AATATTGGCTTCACTAATTGAATTC  425