BAC Information

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BAC

Clone NameB6Ng01-235E10
Chromosome7 (Build37)
Map Location 110,644,001 - 110,762,038
singlet/doubletdoublet
Overlap geneOlfr610, Olfr611, EG545985, Olfr614, Olfr615, Olfr616, LOC100042167, Olfr617, Olfr618, Olfr619, Olfr620
Upstream geneLOC667284, Olfr547, Olfr548-ps1, Olfr549, Trim21, LOC384699, Olfr550, Olfr551, Olfr552, Olfr553, Olfr554, LOC100040840, Olfr555, Olfr556, Trim68, Olfr557, Olfr558, Olfr33, Olfr559, Olfr78, Olfr560, Olfr561, Olfr562-ps1, Olfr563-ps1, Olfr564, Olfr565-ps1, Olfr566, GA_x5J8B7W5P47-379997-380552, Olfr567-ps1, Olfr568, Olfr569, Olfr570, Olfr571, Olfr572, Olfr573-ps1, Olfr574, Olfr575, Olfr576, Olfr577, Olfr578, Olfr1527-ps1, Olfr579-ps1, Olfr580-ps1, Olfr581-ps1, Olfr582, Olfr583, Olfr584, Olfr585, Olfr586, Olfr587-ps1, Olfr588-ps1, Olfr589, Olfr590-ps1, Olfr591, Olfr592, Olfr593, Olfr594, Olfr595-ps1, Usp17, Dub2a, LOC100041187, Olfr597, GA_x5J8B7TU1BB-380-666, Olfr598, Olfr599, Olfr600, Olfr601, Olfr602-ps1, Olfr604, Olfr596-ps1, Dub2, Olfr605, Olfr606, EG546989, Olfr608, Olfr609
Downstream geneLOC667639, Olfr622, Olfr623, Olfr624, Olfr625-ps1, Olfr261-ps1, Olfr260-ps1, Olfr627, Olfr1526-ps1, Olfr629, Olfr630, Olfr69, Olfr68, Olfr67, Hbb-b1, EG436003, Hbb-bh1, Hbb-y, Olfr66, Olfr64, Olfr65, Olfr631, Olfr632, Olfr633, Olfr634-ps1, LOC233614, Olfr635, Olfr636-ps1, Olfr637-ps1, Olfr638, Olfr639, Olfr640, Olfr641, Olfr642, Olfr643, Olfr644, Olfr645, Olfr646, 4931431F19Rik, Ubqln3, Ubqlnl, E030002O03Rik, Olfr647-ps1, Olfr648, Olfr649, Olfr650-ps1, Trim6, LOC667497, EG667823, Trim12, Trim34, 9230105E10Rik, A530023O14Rik, EG434219, LOC100041595, Trim30, AI451617, LOC672495, LOC625305, EG625321, Olfr651, Olfr652, Olfr653, Olfr654, Olfr655
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-235E10.bB6Ng01-235E10.g
ACCGA046791GA046792
length1,1851,146
definitionB6Ng01-235E10.b B6Ng01-235E10.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(110,760,853 - 110,762,038)(110,644,001 - 110,645,144)
sequence
gaattcctattgtgctctgaaatctcaaattatttttccaaattgtaata
atgtattaaacttcataatcaaagaattgcctgtgtgtaaattcatcaac
atgcagagtcatgtgtgttctactctgatatgggagatatatattagata
gatagatagatagatagatagatagatagatagatagatagataaataga
tatgcatgcaagcatgtgtgtgtgcatacagatgatcaggtacaaactat
catatattttgttgttcctattttgttttcttttgtggttgctttattct
atatacttatgtatttttccttgaacagataacaaagacacagctaagat
aaatattacaaaatacttgtttcaaactatacagtttaaaatgtggaaca
actatgttatcttataagtgaaaatttaccaattgacaataccatgatgt
tcaggaaatgcaaaaatctcatatagcaaagagttggacaataaatagat
aaaaagtaaattaagtaaaatttatgtaggtgaataatttaaagcagatt
tgataactattttacaagccagaaattttagattccactaagatttctga
aatgtattatagacaatattatgtatagttttatatataagatagtatta
catatagttatatatagtacagtatatataagataatattacatataatc
ataaataatatatgatcagatatacaatattctgaaaaatacattaaata
gtccaatttctattgagatcatttgcatctgggaagatttgaaagaccca
gatgtcatagcagagagaacaattctcatgagcatcataacaaattagtg
aatgaacactgttatcctttaggactgggcagactcctagaagactgttc
tacaagctaaatcccataagcccgtgggttgttactgatcctgcataaaa
ctcacaggtttcatggcatccctcaaccctagtactgaaaggtcttgtat
cgagaaaaacagggtttctccatgattaacatcaaaggaacatgtatgta
tcttgtgtttatggaattgtaccatatttatttctttaaaaaccaagtag
acataattagaattatatagtaatggaaaagttaattccaaaggtttttc
caaggaatttccatcttctaccgatgactgcctct
gaattcctcatgttgtggtgaacctcaataaaattattttgttgctactt
cataactgtaatttttccattgctatgaattataatgtaaatatgtgaca
tgcaatgtatctgatatgcaatccctgtgaaagggtcacttgacccccac
aggttaagaaccactgtactagactgagaatttgaggattaagaggaaac
attcaatgttgagaagactcagaccaccaaagtcaaatctctcccctaag
agtactttgtgtcatccagcaaattaatagccagctccaaactatactaa
gtatgtctgtctttgctgtagaaatggtgatgcaagactggtaactataa
tataaagggcaacctataagtcatgcagcatttaaggttctcttaattaa
cactgagttggtgtttcctgggttgaagcctcaccttgatgttttaacga
tgccttgaaatgactgtgtggcactccaaagtctgaattgctgccactgt
tgcaactgtagtgtagacagctgattgcaactgtcaaaattcccactgaa
atagatgtgaaaaagaataggggcacgtcctcaaatagaaagtttgatca
ttccaacaaagtactgaagttgattccggcatgcacatttacacaaactc
agatgtcttcagtattaatagttaagcaccaaaatcatgatttaataaat
aattatgtcatgagtttccctatcatttactgataaaagaaccaaattaa
ttttcactaaggtaatctacatgtctgctaatcattaaggctgttggaag
ttgatgaaaatgtgaagtatgtcatagaaatgtctgaggacctttgactg
agatgatctgggcatcaaaaggtttctctgttggaataattcatatactc
agcctgcagtgttttattttaactcagaacgaaatatttgtataatctga
aagggtcttccttccacatataaatcacagtaaaaaaggcaaaatgtagc
aaatgttctttattatattttcagatttgtttctattatctttggaaaga
aatgacatgtgaaaataggctgaactgacttttttagtctcttgttacat
atttgactcagatactgctagagttagtttgtgatgtatatactca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_110760853_110762038
seq2: B6Ng01-235E10.b_42_1226 (reverse)

seq1  AGAGAGCAGTCATTGGTAGAAGATTGAAAATTCCTTTGGAAAAAACTTTG  50
      |||| |||||||| ||||||||| || ||||||| ||||||||| |||||
seq2  AGAG-GCAGTCATCGGTAGAAGA-TGGAAATTCC-TTGGAAAAACCTTTG  47

seq1  GATATAACTTTT-CAATACTATA-ATTTCTAATAATGTCTACTTGGTTTT  98
      ||  |||||||| || ||||||| | ||||||| ||||||||||||||||
seq2  GAATTAACTTTTCCATTACTATATAATTCTAATTATGTCTACTTGGTTTT  97

seq1  TAAAAGAAAATAAAATATGGTACAATTTCCATAAACAACAAGATACATAC  148
      | |||||||   ||||||||||||| |||||||||| |||||||||||||
seq2  T-AAAGAAA--TAAATATGGTACAA-TTCCATAAAC-ACAAGATACATAC  142

seq1  ATGTTCCTTTGATGTT-ATCATGGAGAAACCCTG-TTTTCTCGATAC-AG  195
      |||||||||||||||| ||||||||||||||||| |||||||||||| ||
seq2  ATGTTCCTTTGATGTTAATCATGGAGAAACCCTGTTTTTCTCGATACAAG  192

seq1  ACCTTTCAGTACTAGGGTTGAGGGATGCCATGAAACCTGTGAGTTTTATG  245
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTTCAGTACTAGGGTTGAGGGATGCCATGAAACCTGTGAGTTTTATG  242

seq1  CAGGATCAGTAAC-ACCCACGGGCTTATGGGATTTAGCTTGTAGAACAGT  294
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  CAGGATCAGTAACAACCCACGGGCTTATGGGATTTAGCTTGTAGAACAGT  292

seq1  CTTCTAGGAGTCTGCCCAGTCCTAAAGGATAACAGTGTTCATTCACTAAT  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTAGGAGTCTGCCCAGTCCTAAAGGATAACAGTGTTCATTCACTAAT  342

seq1  TTGTTATGATGCTCATGAGAATTGTTCTCTCTGCTATGACATCTGGGTCT  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTATGATGCTCATGAGAATTGTTCTCTCTGCTATGACATCTGGGTCT  392

seq1  TTCAAATCTTCCCAGATGCAAATGATCTCAATAG-AATTGGACTATTTAA  443
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  TTCAAATCTTCCCAGATGCAAATGATCTCAATAGAAATTGGACTATTTAA  442

seq1  TGTATTTTTCAGAATATTGTATATCTGATCATATATTATTTATGATTATA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATTTTTCAGAATATTGTATATCTGATCATATATTATTTATGATTATA  492

seq1  TGTAATATTATCTTATATATACTGTACTATATATAACTATATGTAATACT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAATATTATCTTATATATACTGTACTATATATAACTATATGTAATACT  542

seq1  ATCTTATATATAAAACTATACATAATATTGTCTATAATACATTTCAGAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTATATATAAAACTATACATAATATTGTCTATAATACATTTCAGAAA  592

seq1  TCTTAGTGGAATCTAAAATTTCTGGCTTGTAAAATAGTTATCAAATCTGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGTGGAATCTAAAATTTCTGGCTTGTAAAATAGTTATCAAATCTGC  642

seq1  TTTAAATTATTCACCTACATAAATTTTACTTAATTTACTTTTTATCTATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTATTCACCTACATAAATTTTACTTAATTTACTTTTTATCTATT  692

seq1  TATTGTCCAACTCTTTGCTATATGAGATTTTTGCATTTCCTGAACATCAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGTCCAACTCTTTGCTATATGAGATTTTTGCATTTCCTGAACATCAT  742

seq1  GGTATTGTCAATTGGTAAATTTTCACTTATAAGATAACATAGTTGTTCCA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATTGTCAATTGGTAAATTTTCACTTATAAGATAACATAGTTGTTCCA  792

seq1  CATTTTAAACTGTATAGTTTGAAACAAGTATTTTGTAATATTTATCTTAG  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTAAACTGTATAGTTTGAAACAAGTATTTTGTAATATTTATCTTAG  842

seq1  CTGTGTCTTTGTTATCTGTTCAAGGAAAAATACATAAGTATATAGAATAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTTTGTTATCTGTTCAAGGAAAAATACATAAGTATATAGAATAA  892

seq1  AGCAACCACAAAAGAAAACAAAATAGGAACAACAAAATATATGATAGTTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAACCACAAAAGAAAACAAAATAGGAACAACAAAATATATGATAGTTT  942

seq1  GTACCTGATCATCTGTATGCACACACACATGCTTGCATGCATATCTATTT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTGATCATCTGTATGCACACACACATGCTTGCATGCATATCTATTT  992

seq1  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTATCTAA  1042

seq1  TATATATCTCCCATATCAGAGTAGAACACACATGACTCTGCATGTTGATG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATCTCCCATATCAGAGTAGAACACACATGACTCTGCATGTTGATG  1092

seq1  AATTTACACACAGGCAATTCTTTGATTATGAAGTTTAATACATTATTACA  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTACACACAGGCAATTCTTTGATTATGAAGTTTAATACATTATTACA  1142

seq1  ATTTGGAAAAATAATTTGAGATTTCAGAGCACAATAGGAATTC  1186
      |||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAAAAATAATTTGAGATTTCAGAGCACAATAGGAATTC  1185

seq1: chr7_110644001_110645144
seq2: B6Ng01-235E10.g_67_1212

seq1  GAATTCCTCATGTTGTGGTGAACCTCAATAAAATTATTTTGTTGCTACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTCATGTTGTGGTGAACCTCAATAAAATTATTTTGTTGCTACTT  50

seq1  CATAACTGTAATTTTTCCATTGCTATGAATTATAATGTAAATATGTGACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACTGTAATTTTTCCATTGCTATGAATTATAATGTAAATATGTGACA  100

seq1  TGCAATGTATCTGATATGCAATCCCTGTGAAAGGGTCACTTGACCCCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATGTATCTGATATGCAATCCCTGTGAAAGGGTCACTTGACCCCCAC  150

seq1  AGGTTAAGAACCACTGTACTAGACTGAGAATTTGAGGATTAAGAGGAAAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTAAGAACCACTGTACTAGACTGAGAATTTGAGGATTAAGAGGAAAC  200

seq1  ATTCAATGTTGAGAAGACTCAGACCACCAAAGTCAAATCTCTCCCCTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAATGTTGAGAAGACTCAGACCACCAAAGTCAAATCTCTCCCCTAAG  250

seq1  AGTACTTTGTGTCATCCAGCAAATTAATAGCCAGCTCCAAACTATACTAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTTTGTGTCATCCAGCAAATTAATAGCCAGCTCCAAACTATACTAA  300

seq1  GTATGTCTGTCTTTGCTGTAGAAATGGTGATGCAAGACTGGTAACTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATGTCTGTCTTTGCTGTAGAAATGGTGATGCAAGACTGGTAACTATAA  350

seq1  TATAAAGGGCAACCTATAAGTCATGCAGCATTTAAGGTTCTCTTAATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAGGGCAACCTATAAGTCATGCAGCATTTAAGGTTCTCTTAATTAA  400

seq1  CACTGAGTTGGTGTTTCCTGGGTTGAAGCCTCACCTTGATGTTTTAACGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAGTTGGTGTTTCCTGGGTTGAAGCCTCACCTTGATGTTTTAACGA  450

seq1  TGCCTTGAAATGACTGTGTGGCACTCCAAAGTCTGAATTGCTGCCACTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTGAAATGACTGTGTGGCACTCCAAAGTCTGAATTGCTGCCACTGT  500

seq1  TGCAACTGTAGTGTAGACAGCTGATTGCAACTGTCAAAATTCCCACTGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAACTGTAGTGTAGACAGCTGATTGCAACTGTCAAAATTCCCACTGAA  550

seq1  ATAGATGTGAAAAAGAATAGGGGCACGTCCTCAAATAGAAAGTTTGATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGATGTGAAAAAGAATAGGGGCACGTCCTCAAATAGAAAGTTTGATCA  600

seq1  TTCCAACAAAGTACTGAAGTTGATTCCGGCATGCACATTTACACAAACTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACAAAGTACTGAAGTTGATTCCGGCATGCACATTTACACAAACTC  650

seq1  AGATGTCTTCAGTATTAATAGTTAAGCACCAAAATCATGATTTAATAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGTCTTCAGTATTAATAGTTAAGCACCAAAATCATGATTTAATAAAT  700

seq1  AATTATGTCATGAGTTTCCCTATCATTTACTGATAAAAGAACCAAATTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATGTCATGAGTTTCCCTATCATTTACTGATAAAAGAACCAAATTAA  750

seq1  TTTTCACTAAGGTAATCTACATGTCTGCTAATCATTAAGGCTGTTGGAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCACTAAGGTAATCTACATGTCTGCTAATCATTAAGGCTGTTGGAAG  800

seq1  TTGATGAAAATGTGAAGTATGTCATAGAAATGTCTGAGGACC-TTGACTG  849
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TTGATGAAAATGTGAAGTATGTCATAGAAATGTCTGAGGACCTTTGACTG  850

seq1  AGATGATCTGGGCATCAAAAGGTTTCTCTGTTGGAATAATTCATATACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATCTGGGCATCAAAAGGTTTCTCTGTTGGAATAATTCATATACTC  900

seq1  AGCCTGCAGTGTTT--ATTTAACTCAGAACGAAATATTTGTATAATCTGA  947
      ||||||||||||||   |||||||||||||||||||||||||||||||||
seq2  AGCCTGCAGTGTTTTATTTTAACTCAGAACGAAATATTTGTATAATCTGA  950

seq1  AAGGGTC-TCCTTCCACATATAAATCACAGT-AAAAAGGCAAAATGTAGC  995
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  AAGGGTCTTCCTTCCACATATAAATCACAGTAAAAAAGGCAAAATGTAGC  1000

seq1  AAATGTTCTTTA-TATATTTTCAGAATTTGTTTCTATTATCTTTTGGAAA  1044
      |||||||||||| ||||||||||| |||||||||||||||| ||||||||
seq2  AAATGTTCTTTATTATATTTTCAG-ATTTGTTTCTATTATC-TTTGGAAA  1048

seq1  GAAATGACATGTGAAAATAGGCTGAACTGGACTATTTTAAT-TCTCTGTA  1093
      |||||||||||||||||||||||||||| |||| ||||| | |||   ||
seq2  GAAATGACATGTGAAAATAGGCTGAACT-GACTTTTTTAGTCTCTTGTTA  1097

seq1  CATATTTAACTCAGATACTGCCTAGAAGTAGTTTGTGATTGTATATACTC  1143
      ||||||| |||||||||||| |||||  |||||||||| |||||||||||
seq2  CATATTTGACTCAGATACTG-CTAGAGTTAGTTTGTGA-TGTATATACTC  1145

seq1  A  1144
      |
seq2  A  1146