BAC Information

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BAC

Clone NameB6Ng01-236F05
Chromosome7 (Build37)
Map Location 118,998,646 - 118,999,605
singlet/doubletsinglet
Overlap genenone
Upstream geneXlkd1, Mrvi1, Ctr9, Eif4g2, LOC100043221, LOC100042658, LOC384658, Galntl4
Downstream geneLOC668399, LOC100042678, Usp47, Dkk3, Mical2, Micalcl, Parva, LOC627808, Tead1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-236F05.bB6Ng01-236F05.g
ACCGA047572GA047573
length830961
definitionB6Ng01-236F05.b B6Ng01-236F05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagtcccattttttaatggggttatttgatt
ttctggagtctaccttcttgagttctttatatatattggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggcct
tttgtcttattgacggtgtcttttgccttacagaagctttgcaattttat
gaggtcccaattgtcgattctcaatcttacagcacaagccattgctgttc
tattcaggattttttccccgtgcccctatcttggaggcttttctccactt
tctcctctataagtttcagtgtctctggttttatgtggagtaccccttct
tagaattgggaacaaaacaccatgggaggagttacagagacaaagtttgg
agctgagaggaaaggatagactatctagagactgccacacccggggatcc
atcccataatcagcctccaaacgctgacaccattgcatacgccagcgaga
ttttgctgaaaggactctgatatagctgtctcttgtgaggctatgctggt
gcctggcaaacacagaagtggatgctcacagttagctattggatggaaca
cagggccccccaatggaggagctagagaaagtacccaaggagctaaaggg
gtctgcaaccctataggtggaacaacaatatgaactaactagtactcctg
gagctcgtgtctctaactgtatatgtagcagaagatggcctagtaggcca
acattgggaagagaggccccttggtcttgcaaactttatatgcctcagta
caggggaacgccagggccaagaagtgggag
gaattcagatgtgtgcattgcatttagacttggctcttgccttgagtgca
gcagagaactagcaagctgttgtcatgggcatcccgggaccactctgtgg
tccctactcctacaggagtggttgcatctacttgggggccgcactgatgt
gataattactctattaatgatggcctctcacagccccagtcttcagttac
tcttaaaatcccctttgcgtctgccaaatggtgtagcctagctccatttc
acagacacccagactccgagattcattggccatcagatcgcctatcatga
acacagactcagacattgcttgactaagagacagcccctttgggtcagaa
tccatgttttctgacttggtccagggctccatttacttccttactgtgaa
cttgaaagtgagggagttcacagtaactcctcttgacttagtgtggttgt
ttgtgatatagttgcatgaacgctacttaattgattctctgcttccaccc
ctctctttctctgcaagtctgagctggagcagggcatgcttggtaggcgt
ggggcacacaggtggctcattgccttgtgccctagggctgcagtaaattg
ctattatctggtctccagcctctggcagagatggggaggggaggccgaga
aagtgacatttctgtaaataaccacacctggttctgagagcaggaggatt
ggcatgtccctgttagcctcatcaattcccatcaaccttttgcaggggga
gccccaggggagagactgtcttcacacctttatggttatttatagccacc
tcatcttcgtccacactcagggggttctggttcaattggtaacagtctcc
ttccacatgggctttagaccttcccgggaacatgtgcttagccctctact
acacagaccagagggcatagcagccacttgagtcaagtgaggacaggaag
aggagacttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_118998646_118999605
seq2: B6Ng01-236F05.g_71_1031 (reverse)

seq1  CCAAGTCTCCTCTTCCTGTCCTCACTTTGACTC-AGTGGCTGCTATGCCC  49
      ||||||||||||||||||||||||| ||||||| ||||||||||||||||
seq2  CCAAGTCTCCTCTTCCTGTCCTCAC-TTGACTCAAGTGGCTGCTATGCCC  49

seq1  TCTGGTCTGTGTAGTAGAGGGCTAAGCAACATGTTCCC-GGAAGGTTCTA  98
      ||||||||||||||||||||||||||| |||||||||| |||||||   |
seq2  TCTGGTCTGTGTAGTAGAGGGCTAAGC-ACATGTTCCCGGGAAGGTCTAA  98

seq1  AGCCCATGTGGAAGGAGACTGTTACCAATTGAACCAGAACCCCCCTGAGT  148
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  AGCCCATGTGGAAGGAGACTGTTACCAATTGAACCAGAA-CCCCCTGAGT  147

seq1  GTGGACG-AGATGAGGTGGCTATAAATAACCATAAAGGTGTGAAGACAGT  197
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGACGAAGATGAGGTGGCTATAAATAACCATAAAGGTGTGAAGACAGT  197

seq1  CTCTCCCCTGGGGCTCCCCCTGCAAAAGGTTGATGGGAATTGATGAGGCT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCCTGGGGCTCCCCCTGCAAAAGGTTGATGGGAATTGATGAGGCT  247

seq1  -ACAGGGACATGCCAATCCTCCTGCTCTCAGAACCAGGTGTGGTTATTTA  296
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGGGACATGCCAATCCTCCTGCTCTCAGAACCAGGTGTGGTTATTTA  297

seq1  CAGAAATGTCACTTTCTCGGCCTCCCCTCCCCATCTCTGCCAGAGGCTGG  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAATGTCACTTTCTCGGCCTCCCCTCCCCATCTCTGCCAGAGGCTGG  347

seq1  AGACCAGATAATAGCAATTTACTGCAGCCCTAGGGCACAAGGCAATGAGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGATAATAGCAATTTACTGCAGCCCTAGGGCACAAGGCAATGAGC  397

seq1  CACCTGTGTGCCCCACGCCTACCAAGCATGCCCTGCTCCAGCTCAGACTT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTGTGTGCCCCACGCCTACCAAGCATGCCCTGCTCCAGCTCAGACTT  447

seq1  GCAGAGAAAGAGAGGGGTGGAAGCAGAGAATCAATTAAGTAGCGTTCATG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGAAAGAGAGGGGTGGAAGCAGAGAATCAATTAAGTAGCGTTCATG  497

seq1  CAACTATATCACAAACAACCACACTAAGTCAAGAGGAGTTACTGTGAACT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTATATCACAAACAACCACACTAAGTCAAGAGGAGTTACTGTGAACT  547

seq1  CCCTCACTTTCAAGTTCACAGTAAGGAAGTAAATGGAGCCCTGGACCAAG  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCACTTTCAAGTTCACAGTAAGGAAGTAAATGGAGCCCTGGACCAAG  597

seq1  TCAGAAAACATGGATTCTGACCCAAAGGGGCTGTCTCTTAGTCAAGCAAT  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAAAACATGGATTCTGACCCAAAGGGGCTGTCTCTTAGTCAAGCAAT  647

seq1  GTCTGAGTCTGTGTTCATGATAGGCGATCTGATGGCCAATGAATCTCGGA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGAGTCTGTGTTCATGATAGGCGATCTGATGGCCAATGAATCTCGGA  697

seq1  GTCTGGGTGTCTGTGAAATGGAGCTAGGCTACACCATTTGGCAGACGCAA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGGGTGTCTGTGAAATGGAGCTAGGCTACACCATTTGGCAGACGCAA  747

seq1  AGGGGATTTTAAGAGTAACTGAAGACTGGGGCTGTGAGAGGCCATCATTA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATTTTAAGAGTAACTGAAGACTGGGGCTGTGAGAGGCCATCATTA  797

seq1  ATAGAGTAATTATCACATCAGTGCGGCCCCCAAGTAGATGCAACCACTCC  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGAGTAATTATCACATCAGTGCGGCCCCCAAGTAGATGCAACCACTCC  847

seq1  TGTAGGAGTAGGGACCACAGAGTGGTCCCGGGATGCCCATGACAACAGCT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGAGTAGGGACCACAGAGTGGTCCCGGGATGCCCATGACAACAGCT  897

seq1  TGCTAGTTCTCTGCTGCACTCAAGGCAAGAGCCAAGTCTAAATGCAATGC  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGTTCTCTGCTGCACTCAAGGCAAGAGCCAAGTCTAAATGCAATGC  947

seq1  ACACATCTGAATTC  960
      ||||||||||||||
seq2  ACACATCTGAATTC  961