BAC Information

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BAC

Clone NameB6Ng01-241I05
Chromosome7 (Build37)
Map Location 94,479,639 - 94,480,783
singlet/doubletsinglet
Overlap geneNox4
Upstream geneOlfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477
Downstream geneTyr, Grm5, Ctsc
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-241I05.bB6Ng01-241I05.g
ACCGA051407GA051408
length1,1861,117
definitionB6Ng01-241I05.b B6Ng01-241I05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatattgaatggctaagaaccatttaaagaaatg
cttaaagtttttagtcataattttagtcatccgagagatgcaaatcaaaa
ccggttccatcatatatccatcagaatgactatgatcaaaaactcaagag
acagtgcattctggcaagaatcaaggatgtggagcaaaaggagtcctttt
ttttttttctggtgggaatgcaaacttttacaaccactttggaaataatt
tggagttttctcagaaaagtggaaacaattctatctcaagatttatgtgc
gtataatcaaaagatgctctgacatcccacaaggacacttgctcagctat
gttccttccagctttattcgtacataatagccagaaactggaaacaagct
tgatgcccctcaactgaagaatggatgaagataatgcgatacatttacac
agtggaatactattgagctattaaaaaccaagacatcatgaattttgcag
gcaaatggatggaacttaagagtattatcttgagtgaggtaaatccattc
caagagaacatgcatggtatgtactcacttatatgtggatattagccata
aactacaggtaccagactacattctacagactcaaagaagctaaagaaga
aggaaggcccaagacaggaagcttgactctcacatagaagagggtcataa
gggacagatggagagagggaactaggacagaaacaggatgataggggaga
ctgagcaggggaggcgttaggatctgatgtatggaagtacaggaaagatg
gttagacagccatgaaaatgaatgaaatctgtaactgacaggggtgagga
ggtgtgagatatctttaggatcaaacagagacctcagatgatggaggcac
ccaagaatcaatggaagtgaccttagctgtgactcactatattgggtata
tagaagcagaagaggttactcctatagccaggcataaatgtcagtggacg
atagaaatgcccaacccacccacaaaactcaaccccaaatttatttctgt
ttgcagaatgtaagcacacgatgtacagagactgaagatgacatcatacc
tgccacgtggaaccatccatggccaacctagtctggatcatatgaatctg
tttctcaacaaggacccatggtgtcctctgcgagag
gaattcttcacatttacaatccaattgcaggagaaaaacaagtcttgacc
atcaaaacttcaaaatagaattaggagctgacacttctgtccagtgtcat
caccattatcaaagctatcatcatacctacactggatgggacagacacct
agctgctctccctgcttctgctaatgtagtaaccagagtcacacatggaa
aaggacagtgccttaaatctctgggaaacacatcctgatatgaactggga
tttccgatctggaaacacgggtgggccatcagagaaatatagacagctgt
aaagtaacagaaggttagtcgactgataatagtgccttttgccattcaga
gctcatgggaatgtagagggaaataaatgaaacaagactgaatcaaaagt
caccataaacatggatgtcctggaaacaaatcgaaaattgtaaaaagtgt
ttcaataaaaaatgacagcaggatggaaaggtgctgatttgtaaagacca
tgaatgaatgggaaatgctcagtgcatttaccagtaagaaggcatggttc
atcttggaagtatcttcatggcatgcagctgtggccaaatccaagggtaa
gcaacagagaaagagagaaaagtctgatgaattgcagcagtagccagaag
ggacgagtcaggaaaggagtgtcttcattttctccttgaaaccaggaggt
gagagaaatatcaaaaactattgatggaataaatcaaattaatattaacc
agtctatttgttctgagtatgctgctttatttagctcacatttatcacag
aagctatcattagtctctgaggaaacattgcttttctcctggaagacagc
caaagtacaggagttaggtgatgtttaattctcaaaaacctcaaacattt
tgttgggttctatggatactaatcactgtctgtggttttcacactgtgcc
ttgatacatatgacagattgtgcctgcagctacttctctcaagcttctag
cgcaaagatctgagaaaaacagagtacgcaaggttttagtgctaactaga
ggaatagagcaggaatcagtagttgacagatactaggttaatttatgact
aatgatatgacaactga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_94479639_94480783
seq2: B6Ng01-241I05.g_67_1183 (reverse)

seq1  TCAGTTGTCAT-TTATTAAATTTTATGTCATTAAATGTAACTAGTAATTC  49
      ||||||||||| | ||||        |||| |||||  | ||||||    
seq2  TCAGTTGTCATATCATTA--------GTCA-TAAATTAACCTAGTA----  37

seq1  TTTGTCAACTACTTTGATTTCTGCTCTTAATCCCTTCTAGTTAGCACTTA  99
      | ||||||||||  ||||| |||||||  || || ||||||||||||| |
seq2  TCTGTCAACTAC--TGATTCCTGCTCT--ATTCC-TCTAGTTAGCACTAA  82

seq1  AAACTTGCCTTACTCTTGTTTTTCTCAGATCTTTTGCGCTAGAAGCTTGG  149
      || |||| | ||||| ||||||||||||||| ||||||||||||||||| 
seq2  AACCTTG-CGTACTC-TGTTTTTCTCAGATC-TTTGCGCTAGAAGCTTG-  128

seq1  AGGAGAAGGTAGCTTGCCAGGCACAATCTGTCATTATGTATTCAAGGCAC  199
        ||||| ||||||   |||||||||||||||| |||||| |||||||||
seq2  -AGAGAA-GTAGCT--GCAGGCACAATCTGTCA-TATGTA-TCAAGGCAC  172

seq1  AGTGTTGAAAACCACAGACAGTGATTAGTATCCATAGAACCCAACAAAAT  249
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTG-TGAAAACCACAGACAGTGATTAGTATCCATAGAACCCAACAAAAT  221

seq1  GTTTGAGGTTTTTGAGAATTAAACATCACCTAACTCCTGTACTTTGGCTG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGAGGTTTTTGAGAATTAAACATCACCTAACTCCTGTACTTTGGCTG  271

seq1  TCTTCCAGGAGAAAAGCAATGTTTCCTCAGAGACTAATGATAGCTTCTGT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCAGGAGAAAAGCAATGTTTCCTCAGAGACTAATGATAGCTTCTGT  321

seq1  GATAAATGTGAGCTAAATAAAGCAGCATACTCAGAACAAATAGACTGGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAAATGTGAGCTAAATAAAGCAGCATACTCAGAACAAATAGACTGGTT  371

seq1  AATATTAATTTGATTTATTCCATCAATAGTTTTTGATATTTCTCTCACCT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAATTTGATTTATTCCATCAATAGTTTTTGATATTTCTCTCACCT  421

seq1  CCTGGTTTCAAGGAGAAAATGAAGACACTCCTTTCCTGACTCGTCCCTTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGTTTCAAGGAGAAAATGAAGACACTCCTTTCCTGACTCGTCCCTTC  471

seq1  TGGCTACTGCTGCAATTCATCAGACTTTTCTCTCTTTCTCTGTTGCTTAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTACTGCTGCAATTCATCAGACTTTTCTCTCTTTCTCTGTTGCTTAC  521

seq1  CCTTGGATTTGGCCACAGCTGCATGCCATGAAGATACTTCCAAGATGAAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGATTTGGCCACAGCTGCATGCCATGAAGATACTTCCAAGATGAAC  571

seq1  CATGCCTTCTTACTGGTAAATGCACTGAGCATTTCCCATTCATTCATGGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCCTTCTTACTGGTAAATGCACTGAGCATTTCCCATTCATTCATGGT  621

seq1  CTTTACAAATCAGCACCTTTCCATCCTGCTGTCATTTTTTATTGAAACAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACAAATCAGCACCTTTCCATCCTGCTGTCATTTTTTATTGAAACAC  671

seq1  TTTTTACAATTTTCGATTTGTTTCCAGGACATCCATGTTTATGGTGACTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTACAATTTTCGATTTGTTTCCAGGACATCCATGTTTATGGTGACTT  721

seq1  TTGATTCAGTCTTGTTTCATTTATTTCCCTCTACATTCCCATGAGCTCTG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTCAGTCTTGTTTCATTTATTTCCCTCTACATTCCCATGAGCTCTG  771

seq1  AATGGCAAAAGGCACTATTATCAGTCGACTAACCTTCTGTTACTTTACAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCAAAAGGCACTATTATCAGTCGACTAACCTTCTGTTACTTTACAG  821

seq1  CTGTCTATATTTCTCTGATGGCCCACCCGTGTTTCCAGATCGGAAATCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCTATATTTCTCTGATGGCCCACCCGTGTTTCCAGATCGGAAATCCC  871

seq1  AGTTCATATCAGGATGTGTTTCCCAGAGATTTAAGGCACTGTCCTTTTCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCATATCAGGATGTGTTTCCCAGAGATTTAAGGCACTGTCCTTTTCC  921

seq1  ATGTGTGACTCTGGTTACTACATTAGCAGAAGCAGGGAGAGCAGCTAGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTGTGACTCTGGTTACTACATTAGCAGAAGCAGGGAGAGCAGCTAGGT  971

seq1  GTCTGTCCCATCCAGTGTAGGTATGATGATAGCTTTGATAATGGTGATGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCCCATCCAGTGTAGGTATGATGATAGCTTTGATAATGGTGATGA  1021

seq1  CACTGGACAGAAGTGTCAGCTCCTAATTCTATTTTGAAGTTTTGATGGTC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGACAGAAGTGTCAGCTCCTAATTCTATTTTGAAGTTTTGATGGTC  1071

seq1  AAGACTTGTTTTTCTCCTGCAATTGGATTGTAAATGTGAAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACTTGTTTTTCTCCTGCAATTGGATTGTAAATGTGAAGAATTC  1117