BAC Information

Click to search

BAC

Clone NameB6Ng01-242P15
Chromosome7 (Build37)
Map Location 149,086,764 - 149,219,833
singlet/doubletdoublet
Overlap geneTollip, EG623757, Brsk2, 2700078K21Rik
Upstream geneNlrp6, Athl1, Ifitm5, Ifitm2, Ifitm1, LOC665143, Ifitm3, Ifitm6, B4galnt4, Pkp3, Sigirr, Trp53i5, Ptdss2, Rnh1, LOC546015, Hras1, Lrrc56, 1600016N20Rik, Rassf7, AA673488, Irf7, Mucdhl, Sct, Drd4, Deaf1, Tmem80, Eps8l2, B230206H07Rik, Taldo1, LOC100043585, Pddc1, Cend1, Slc25a22, Lrdd, Rplp2, Pnpla2, Efcab4a, Cd151, Polr2l, Tspan4, Chid1, Ap2a2, Muc6, LOC100039649, Muc2, Muc5ac, Muc5b
Downstream geneDusp8, LOC100039728, EG668763, LOC100043616, EG665295, LOC100043617, Krtap5-2, LOC100039757, LOC100039767, EG665305, Krtap5-5, EG640223, LOC672428, LOC100039800, LOC100043627, LOC100043629, ENSMUSG00000038442, Krtap5-1, Krtap5-4, LOC270015, 6330512M04Rik, Ctsd, Syt8, Tnni2, Lsp1, ENSMUSG00000043795, Tnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-242P15.bB6Ng01-242P15.g
ACCGA052483GA052484
length9191,080
definitionB6Ng01-242P15.b B6Ng01-242P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(149,218,916 - 149,219,833)(149,086,764 - 149,087,859)
sequence
gaattcttgcctttcctccttttccctcttgattgtaccaggcagcactt
tgtttccagtcttaccttgctgctacttcctcacaatcagtgcctaacct
ttactttaggagggtgtttggcctgctgtgtggcccctgtgagtcctctg
cttgctgccttggaggaggggttcttgctaacttcttgtagctgagttgc
gtgagtttacagggcatgagggggttccacttggcttcctcttgtagctg
gggtcccctggtacgttgcctacacctttctacattttatgttgacctgt
cctgtccagattgacagctgtggaagggaggctcctcctgacagacagga
aaggatgtttctgtccttgtcttctcagttcatcaattgaagagacaggt
actgagttcaaatatcactggctggcttgtgggagcagtggtgggtttag
gggtggagctcacagtggctttgtctctgcaaccctgagaaggagtggga
tatctcatcttgagtaggagtggactgaaccaagcacaagattttttgtg
aagggccatggagtcctagcacaggagcatcaccacatgggtgtaaatat
ggttgcctccttaccctgtgtactgtactcttgaaggtggtcaaggataa
aagctccagtgctagctgccagtacaggaaaccacatggaacagccttga
ggtataaggactgggtcagaccccacctcaagggcaggcctgcctcagtt
accaacctctaccttagtttcttctcctgggtgcatgatgctggtaagta
agctgattctgaaagctctccatgtgtctccagccttcatggcagctcct
tttcttgtgactgctaggatgttagtgaaaagttgaagcttttcttaagt
tgctttttgtgccatttcc
gaattcaaactcagcctgaaccacaagagataaggacactctcagaccac
acggtaagaaagggtccactctccttggccatgtgtccacttggcagggg
atatgaaaagggcaaagctctgtctccctttctcctctggcagccaccat
caatcttctatagtttgctgagacaccgtgaggatgaagaagggttgatg
aacatgaaagtaactccaacattggaaatctccatccaagtttgacagtg
gctcaggagatctggcttcaaagccctcctaaaaagcatctaacaagcct
gaggctttcttcaaagtcaggaaatcagtaatctatcccaaggagttacc
tgttacacacacacacacacacacacacacacacacacacacgcacacac
acacacacaatcaacaccaagctgtcagggtgaaaaaactctgggaaacc
acaggctttgcaggcacactcaatattaacttcaggggaaaaggcactga
ggtgctgatcagaacaatgttctactccacacagccacagttggctaaca
acatcccacccacaccagtctcagggagctactgggaggccatacacact
aggggaggtgagacaggtagtataatagaacccaagacaatcctgaagag
acaaccctgttgggtcttccaagttctctgctcccctctcctcgtttata
aatgaagaaattgaggcttgaaaaggtagccactaactaagctcaagagg
tagtaccctattttctatagatgttagggagaagaggaaactgtcacaag
taaggacagactacaaagtgggatctttcaccatttctgaaaccaaagga
gaccaggttatctctctcctttgggggaccaaaggtgtccgactccactc
ctctgagagacgggaaccaaaggcacctctcagtttggaaattaatgtag
tcagtaccactctcaatctgggagaccaagagtcaggcttgtgtccatct
gggagaccagcagtgaatagatctgaaacgtagggttcagccttcttatc
tgagactaagagtcggttccactcatctgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_149218916_149219833
seq2: B6Ng01-242P15.b_47_965 (reverse)

seq1  GGAATTGGCAC-AAAAGCAACTTAAGAAAAGCTTCAACTTTTCACTAACA  49
      |||| |||||| ||||||||||||||||||||||||||||||||||||||
seq2  GGAAATGGCACAAAAAGCAACTTAAGAAAAGCTTCAACTTTTCACTAACA  50

seq1  TCCTAGCAGTCACAAGAAAAGGAGCTGCCATGAAGGCTGGAGACACATGG  99
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGCAGTCACAAGAAAAGGAGCTGCCATGAAGGCTGGAGACACATGG  100

seq1  AGAGCTTTCAGAATCAGCTTACTTACCAGCATCATGCACCCAGGAGAAGA  149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCTTTCAGAATCAGCTTACTTACCAGCATCATGCACCCAGGAGAAGA  150

seq1  AACTAAGGTAGAGGTTGGTAACTGAGGCAGGCCTGCCCTTGAGGTGGGGT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGTAGAGGTTGGTAACTGAGGCAGGCCTGCCCTTGAGGTGGGGT  200

seq1  CTGACCCAGTCCTTATACCTCAAGGCTGTTCCATGTGGTTTCCTGTACTG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACCCAGTCCTTATACCTCAAGGCTGTTCCATGTGGTTTCCTGTACTG  250

seq1  GCAGCTAGCACTGGAGCTTTTATCCTTGACCACCTTCAAGAGTACAGTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGCTAGCACTGGAGCTTTTATCCTTGACCACCTTCAAGAGTACAGTAC  300

seq1  ACAGGGTAAGGAGGCAACCATATTTACACCCATGTGGTGATGCTCCTGTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGGTAAGGAGGCAACCATATTTACACCCATGTGGTGATGCTCCTGTG  350

seq1  CTAGGACTCCATGGCCCTTCACAAAAAATCTTGTGCTTGGTTCAGTCCAC  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGACTCCATGGCCCTTCACAAAAAATCTTGTGCTTGGTTCAGTCCAC  400

seq1  TCCTACTCAAGATGAGATATCCCACTCCTTCTCAGGGTTGCAGAGACAAA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTACTCAAGATGAGATATCCCACTCCTTCTCAGGGTTGCAGAGACAAA  450

seq1  GCCACTGTGAGCTCCACCCCTAAACCCACCACTGCTCCCACAAGCCAGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTGTGAGCTCCACCCCTAAACCCACCACTGCTCCCACAAGCCAGCC  500

seq1  AGTGATATTTGAACTCAGTACCTGTCTCTTCAATTGATGAACTGAGAAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATATTTGAACTCAGTACCTGTCTCTTCAATTGATGAACTGAGAAGA  550

seq1  CAAGGACAGAAACATCCTTTCCTGTCTGTCAGGAGGAGCCTCCCTTCCAC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGACAGAAACATCCTTTCCTGTCTGTCAGGAGGAGCCTCCCTTCCAC  600

seq1  AGCTGTCAATCTGGACAGGACAGGTCAACATAAAATGTAGAAAGGTGTAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTCAATCTGGACAGGACAGGTCAACATAAAATGTAGAAAGGTGTAG  650

seq1  GCAACGTACCAGGGGACCCCAGCTACAAGAGGAAGCCAAGTGGAACCCCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAACGTACCAGGGGACCCCAGCTACAAGAGGAAGCCAAGTGGAACCCCC  700

seq1  TCATGCCCTGTAAACTCACGCAACTCAGCTACAAGAAGTTAGCAAGAACC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGCCCTGTAAACTCACGCAACTCAGCTACAAGAAGTTAGCAAGAACC  750

seq1  CCTCCTCCAAGGCAGCAAGCAGAGGACTCACAGGGGCCACACAGCAGGCC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCCAAGGCAGCAAGCAGAGGACTCACAGGGGCCACACAGCAGGCC  800

seq1  AAACACCCTCCTAAAGTAAAGGTTAGGCACTGATTGTGAGGAAGTAGCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACCCTCCTAAAGTAAAGGTTAGGCACTGATTGTGAGGAAGTAGCAG  850

seq1  CAAGGTAAGACTGGAAACAAAGTGCTGCCTGGTACAATCAAGAGGGAAAA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGTAAGACTGGAAACAAAGTGCTGCCTGGTACAATCAAGAGGGAAAA  900

seq1  GGAGGAAAGGCAAGAATTC  918
      |||||||||||||||||||
seq2  GGAGGAAAGGCAAGAATTC  919

seq1: chr7_149086764_149087859
seq2: B6Ng01-242P15.g_69_1148

seq1  GAATTCAAACTCAGCCTGAACCACAAGAGATAAGGACACTCTCAGACCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACTCAGCCTGAACCACAAGAGATAAGGACACTCTCAGACCAC  50

seq1  ACGGTAAGAAAGGGTCCACTCTCCTTGGCCATGTGTCCACTTGGCAGGGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTAAGAAAGGGTCCACTCTCCTTGGCCATGTGTCCACTTGGCAGGGG  100

seq1  ATATGAAAAGGGCAAAGCTCTGTCTCCCTTTCTCCTCTGGCAGCCACCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAAAGGGCAAAGCTCTGTCTCCCTTTCTCCTCTGGCAGCCACCAT  150

seq1  CAATCTTCTATAGTTTGCTGAGACACCGTGAGGATGAAGAAGGGTTGATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTTCTATAGTTTGCTGAGACACCGTGAGGATGAAGAAGGGTTGATG  200

seq1  AACATGAAAGTAACTCCAACATTGGAAATCTCCATCCAAGTTTGACAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAAGTAACTCCAACATTGGAAATCTCCATCCAAGTTTGACAGTG  250

seq1  GCTCAGGAGATCTGGCTTCAAAGCCCTCCTAAAAAGCATCTAACAAGCCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGGAGATCTGGCTTCAAAGCCCTCCTAAAAAGCATCTAACAAGCCT  300

seq1  GAGGCTTTCTTCAAAGTCAGGAAATCAGTAATCTATCCCAAGGAGTTACC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCTTTCTTCAAAGTCAGGAAATCAGTAATCTATCCCAAGGAGTTACC  350

seq1  TGTTACACACACACACACACACACACACACACACACACACACGCACACAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTACACACACACACACACACACACACACACACACACACACGCACACAC  400

seq1  ACACACACAATCAACACCAAGCTGTCAGGGTGAAAAAACTCTGGGAAACC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACAATCAACACCAAGCTGTCAGGGTGAAAAAACTCTGGGAAACC  450

seq1  ACAGGCTTTGCAGGCACACTCAATATTAACTTCAGGGGAAAAGGCACTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGCTTTGCAGGCACACTCAATATTAACTTCAGGGGAAAAGGCACTGA  500

seq1  GGTGCTGATCAGAACAATGTTCTACTCCACACAGCCACAGTTGGCTAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTGATCAGAACAATGTTCTACTCCACACAGCCACAGTTGGCTAACA  550

seq1  ACATCCCACCCACACCAGTCTCAGGGAGCTACTGGGAGGCCATACACACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCCCACCCACACCAGTCTCAGGGAGCTACTGGGAGGCCATACACACT  600

seq1  AGGGGAGGTGAGACAGGTAGTATAATAGAACCCAAGACAATCCTGAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGAGGTGAGACAGGTAGTATAATAGAACCCAAGACAATCCTGAAGAG  650

seq1  ACAACCCTGTTGGGTCTTCCAAGTTCTCTGCTCCCCTCTCCTCGTTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCTGTTGGGTCTTCCAAGTTCTCTGCTCCCCTCTCCTCGTTTATA  700

seq1  AATGAAGAAATTGAGGCTTGAAAAGGTAGCCACTAACTAAGCTCAAGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAGAAATTGAGGCTTGAAAAGGTAGCCACTAACTAAGCTCAAGAGG  750

seq1  TAGTACCCTATTTTCTATAGATGTTAGGGAGAAGAGGAAACTGTCACAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTACCCTATTTTCTATAGATGTTAGGGAGAAGAGGAAACTGTCACAAG  800

seq1  TAAGGACAGACTACAAAGTGGGATCTTTCACCATTTCTGAAACC-AAGGA  849
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAAGGACAGACTACAAAGTGGGATCTTTCACCATTTCTGAAACCAAAGGA  850

seq1  GACCAGGTTATCTCTCTCCTTTGGGGGACCAAAGGTGTCCGACTCCACTC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGTTATCTCTCTCCTTTGGGGGACCAAAGGTGTCCGACTCCACTC  900

seq1  CTCTGAGAGACGGGGAACCAAGGCACCTCTCAGTTTGGGAAATTAATGTA  949
      |||||||||||||| | | ||||||||||||||||| |||||||||||||
seq2  CTCTGAGAGACGGGAACCAAAGGCACCTCTCAGTTT-GGAAATTAATGTA  949

seq1  GTCAGTACCACTCTCAATCTGGGAGACCAAGAGTCAGGGCTTGTGTCCAT  999
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GTCAGTACCACTCTCAATCTGGGAGACCAAGAGTCA-GGCTTGTGTCCAT  998

seq1  CTGGGAGACCAAGCAGGTGATAGATCTGAGAACGTAAGGGGTTCAGGGCC  1049
      |||||||||| |||||   |||||||||| ||||||  ||||||||   |
seq2  CTGGGAGACC-AGCAGTGAATAGATCTGA-AACGTA--GGGTTCAG---C  1041

seq1  CTTTCTATCTGAGGAACTAAGGGAAGTCGGGGTCCCACTCCATCTGG  1096
      |||  ||||||||  ||||||   ||||  ||| ||||| |||||||
seq2  CTTCTTATCTGAG--ACTAAG---AGTC--GGTTCCACT-CATCTGG  1080