BAC Information

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BAC

Clone NameB6Ng01-243N22
Chromosome7 (Build37)
Map Location 57,661,762 - 57,662,785
singlet/doubletsinglet
Overlap geneNell1
Upstream gene5330421F07Rik, Dbx1, Htatip2, Prmt3, Slc6a5
Downstream gene4933405O20Rik, EG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-243N22.b
ACCGA053143
length1,025
definitionB6Ng01-243N22.b
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatatatacgttgaatgcaaatcctcttacattcttatttctttg
atctttaatgtttacatttttcattggcacaccttgacacaaaccacatg
cttagagaaccatcaacacacctgtacaggatcgcttaggaacacttagt
gcatatgcccagttcctcaagatagccagttcctcaaggatgaaaaggaa
gaagtaggagcttgttccggtggagcaaacctgtcacctcctcactttcc
aagctgaggcaggagaattgtaagattgagatcaaccttggatcaacttg
gggaaggcagtgcctgatggtcgggcatgtggggaatgtggggctgaccg
acagattctggagtccatgtgcctctatatgttgagccatgtggcaacaa
gtgatggaaataagtatttcttgtactgttcactgagtgtgtctgccctt
tcaatacactaagtttctctcaaggccaatccttaggacatcttacagta
cttaatgattattaggtaaatgaagccttgggggctagtctccctgaaat
aaggccatgggatgaggactatattgtgtctaaacgtacattaaaccctt
tcctttggagttcagaggactgaatgggatcccatacagtacaggcaaat
actgccttcattcagaacaaatacttgtggagatgcttcacttggctcta
acgatccagagttgaaaacagtaacttgatgtcttcactcaccatggaca
gaagtgctgcgaacttagaaacatctgtgtaccttccctaagtctgtacg
gtggaattctgcgctgaacactgttacacactgtacctacttgcactgaa
agggctctaaggaatactatcaacgccactagaaatgggtgaagaaagaa
tcttacagtaatcctcatctggctggcgttccaagttgatggcgtagttc
tgctagtgaagctccatggagatgacatcatgctgctcaaatcaactcgc
acttactctacatggggcagacatg
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_57661762_57662785
seq2: B6Ng01-243N22.b_43_1067

seq1  GAATTCATATATACGTTGAATGCAAATCCTCTTACATTCTTATTTCTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATATATACGTTGAATGCAAATCCTCTTACATTCTTATTTCTTTG  50

seq1  ATCTTTAATGTTTACATTTTTCATTGGCACACCTTGACACAAACCACATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTAATGTTTACATTTTTCATTGGCACACCTTGACACAAACCACATG  100

seq1  CAGAGAGAACCATCAACACACCTGTACAGGATCGCTTAGGAACACTTAGT  150
      |  |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGAGAACCATCAACACACCTGTACAGGATCGCTTAGGAACACTTAGT  150

seq1  GCAGATGCCCAGTTCCTCAAGATAGCCAGTTCCTCAAGGATGAAAAGGAA  200
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATGCCCAGTTCCTCAAGATAGCCAGTTCCTCAAGGATGAAAAGGAA  200

seq1  GAAGTAGGAGCTTGTTCCGGTGGAGCAAACCTGTCACCTCCTCACTTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAGGAGCTTGTTCCGGTGGAGCAAACCTGTCACCTCCTCACTTTCC  250

seq1  AAGCTGAGGCAGGAGAATTGTAAGATTGAGATCAACCTTGGATCAACTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGAGGCAGGAGAATTGTAAGATTGAGATCAACCTTGGATCAACTTG  300

seq1  GGGAAGGCAGTGCCTGATGGTCGGGCATGTGGGGAATGTGGGGCTGACCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  GGGAAGGCAGTGCCTGATGGTCGGGCATGTGGGGAATGTGGGGCTGACCG  350

seq1  ACAGATTCTGGAGTCCATGTGCCTCTATATGTTGAGCCATGTGGCAACAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTCTGGAGTCCATGTGCCTCTATATGTTGAGCCATGTGGCAACAA  400

seq1  GTGATGGAAATAAGTATTTCTTGTACTGTTCACTGAGTGTGTCTGCCCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGAAATAAGTATTTCTTGTACTGTTCACTGAGTGTGTCTGCCCTT  450

seq1  TCAATACACTAAGTTTCTCTCAAGGCCAATCCTTAGGACATCTTACAGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATACACTAAGTTTCTCTCAAGGCCAATCCTTAGGACATCTTACAGTA  500

seq1  CTTAATGATTATTAGGTAAATGAAGCCTTGGGGGCTAGTCTCCCTGAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAATGATTATTAGGTAAATGAAGCCTTGGGGGCTAGTCTCCCTGAAAT  550

seq1  AAGGCCATGGGATGAGGACTATATTGTGTCTAAACGTACATTAAACCCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGCCATGGGATGAGGACTATATTGTGTCTAAACGTACATTAAACCCTT  600

seq1  TCCTTTGGAGTTCAGAGGACTGAATGGGATCCCATAGAATACAGGCAGAT  650
      |||||||||||||||||||||||||||||||||||| | |||||||| ||
seq2  TCCTTTGGAGTTCAGAGGACTGAATGGGATCCCATACAGTACAGGCAAAT  650

seq1  ACTGCCTTCATTCAGAACAAATACTTGTGGAGATGCTTCACTTGCCTCTA  700
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  ACTGCCTTCATTCAGAACAAATACTTGTGGAGATGCTTCACTTGGCTCTA  700

seq1  AGGATCCAGAGTTGAAAACAGTAACTTGATGTCTTCACTCGCCATGGACA  750
      | |||||||||||||||||||||||||||||||||||||| |||||||||
seq2  ACGATCCAGAGTTGAAAACAGTAACTTGATGTCTTCACTCACCATGGACA  750

seq1  GAAGTGCTTAGAATTTGGAAACAGCTGTGTTCCTTCCCTAAGTCTGTAGG  800
      ||||||||  ||| || |||||| |||||| ||||||||||||||||| |
seq2  GAAGTGCTGCGAACTTAGAAACATCTGTGTACCTTCCCTAAGTCTGTACG  800

seq1  GTGGCATTCTGCGCTGAACACTGTTACACGCTGTACCTTCCATCACTGTG  850
      |||| |||||||||||||||||||||||| |||||||| |   |||||  
seq2  GTGGAATTCTGCGCTGAACACTGTTACACACTGTACCTACTTGCACTGAA  850

seq1  AGGGCTCCAAGGATTAGTATCTACCCCTCTTGAAACACGGTAAGAAGGAG  900
      ||||||| ||||| || |||| || || || ||||   |  ||||| || 
seq2  AGGGCTCTAAGGAATACTATCAACGCCACTAGAAATGGGTGAAGAAAGAA  900

seq1  TCTTACGGCAATCCTCAT-TGGCTGGC-TTCCAGGTTGATGGTGTTGTTC  948
      |||||| | ||||||||| |||||||| ||||| |||||||| || ||||
seq2  TCTTACAGTAATCCTCATCTGGCTGGCGTTCCAAGTTGATGGCGTAGTTC  950

seq1  TGCAAG-GGAGGGCCATGGAGTTGACCTCATGCTGCTCAGTTAAACTTAC  997
      ||| || | ||  |||||||| |||| ||||||||||||  | ||| |  
seq2  TGCTAGTGAAGCTCCATGGAGATGACATCATGCTGCTCAAATCAAC-TCG  999

seq1  CAGTTCACATGACATATGGCAGACATG  1024
      || || ||   ||||  ||||||||||
seq2  CACTT-ACTCTACATGGGGCAGACATG  1025