BAC Information

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BAC

Clone NameB6Ng01-245D05
Chromosome7 (Build37)
Map Location 93,423,119 - 93,424,155
singlet/doubletsinglet
Overlap genenone
Upstream geneVmn2r-ps69, LOC330581, LOC100039339, Vmn2r70, Vmn2r-ps72, EG233445, Vmn2r-ps74, EG244114, EG620928, EG546980, LOC666382, LOC637652, LOC637667, EG666418, LOC100039471, EG546981, Vmn2r-ps86, Vmn2r76, Olfr310
Downstream geneOlfr309, Olfr308, Olfr307, Olfr306-ps1, Olfr305, Olfr304, Olfr303, Olfr301, Olfr1531-ps1, Olfr300-ps1, Olfr299, Olfr298, Olfr297, Olfr296-ps1, Olfr295, Olfr294, Olfr293, Olfr292, Folh1, EG546983, Vmn2r-ps87, LOC637896, EG621430, LOC621477, Nox4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-245D05.bB6Ng01-245D05.g
ACCGA054146GA054147
length1,1801,023
definitionB6Ng01-245D05.b B6Ng01-245D05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgcactaaatccacctggttctgggcttttttttgtttgggaga
ttttgaatgacttctatttccttgtgtgatatggttcttttgagatagtt
tacatgctcttgatttaactttggtatgtggtatcttatgttattttttc
atttctgattttgttactttggataatgctttaggctgtttatttagttt
ggctagcagttatctatcttatttattatctcaaaaaccagctttagttt
tgattgattctttgtattgttctctttgtttttatttggttcacttcagc
actgtgtttcactttttttttccccgtctattcctcttgggtgagtttgt
ttctttttgttctaaaactctcagatgtcctagttgctagtgtaagatct
caggttaagttgctagtgtaagatctctccaatttatttgacagggcact
tagtggcataaataatcctcttagcaatgttttcattgtgtaccttaagt
ttgtgtataatgttctatatttttatgaaattccaggaagtctgtaaatt
ctttctttatttcttcactgatcaagacatcatttgattgagttcaggtt
caacgtgtatgtgggctttctgttgtttttcctattattgaagaccatcc
ttaggccaggttcatctgattggattcctgggattatttcaatcttcttt
cattggtggagggttgttttgtgaccaatcatatgtttgatttttgagaa
tgcatggtgaggtgctgagaagaatgtaaattcttttgttttaggatgaa
atattctatagatatcttttaaatccatttgtttcataacctctagtagc
ttcactgtgtctctgttcagtttctttttcagtgatctgcatactggtga
gagtgggggtgttgaagtctctcactattattgtgtggggttgaatgtat
gttttggaggctagaaatgttctttcatgatgtgggtgcttttgcatttg
tggcatagatgttcagaaaagaacatttctcttgcagggtttttcctctt
gatgaatggtgaaggtgtacttccttcgtcacacttgataatgtttttgt
tgaggtctatttaatggaatatagtattgccattccattgcttcttagga
gaattgcttggaagaacctactctcattct
gaattctgtggtcatatctcacagaattataaaatttacaatcagagata
gaaaaattctggttattaaggtgcctctacttcactatgagaaatgttag
tatattgtactcttcccagaggacaccttcctctgggcttataaagaact
tcacatgtttattcaaaaggggatatgtgtcctgtgtaatcagtgtttct
tcatcatttcttgatacaaatgatgttaactcagtactcttaaatatttt
taagaattttattatttgaataaagaaatgttattaaatgaaagtgtatt
tgtatacccatcctaaaattatgcaaatatgaatattcagctttgggata
cacattcattaaatttatttccatattttcacaggaagtaaaatagcacc
aggttatttttaaaatggatattaaattctgaaaatcacaagctatatta
tttaaataatgcttactattttttaaaggtcttagaagttaagacaaaag
gatggaccatccagacactaccccacctgggatccatcccataatcatcc
accaaacccagacactattgcataagccagaaagattttgctgaaaggac
cgtggtataactgtcttgtatgaggctatgctagtgcctgggaaatacag
aagtggatgctcacagtcatctataagatggaacacagggcccccaatgg
agaagctagagaaagcacccaaggaggagctaaaggggtctgcatctcta
taggtggaacaacaatatgaactaaccagtacccccagagcttgtgtctc
tagctgcatatatagcagaagatggcctagttggccatcactaggaagag
aggccccttggtattgcaaactttatatgctccagaacaggggaatgcca
gggccaagaagtgggagtgggtgggtaagagcagcgggagggagagtata
gttactttggatagcatttgaatgtatataagaaatatctataaaagtgt
tattaaaaatgtcttagaagttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_93423119_93424155
seq2: B6Ng01-245D05.g_66_1088 (reverse)

seq1  AAACTTCTAAGACATTTTTAATAACAACTTTTTATTAGATATTTTCTTTA  50
      ||||||||||||||||||||||||| ||||||   |||||||||   |||
seq2  AAACTTCTAAGACATTTTTAATAAC-ACTTTT--ATAGATATTT--CTTA  45

seq1  TATACATTTCAAATGCTATCCCAAAAGTAACCTATACTCTTCCCTCCCGC  100
      |||||| ||||||||||||||  ||||||| |||||||| ||||||||| 
seq2  TATACA-TTCAAATGCTATCC--AAAGTAA-CTATACTC-TCCCTCCCG-  89

seq1  CCTGCTCCCTTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTG  150
       |||||  ||||||||||||||||||||||||||||||||||||||||||
seq2  -CTGCT--CTTACCCACCCACTCCCACTTCTTGGCCCTGGCATTCCCCTG  136

seq1  TTCTGGAGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCTAGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAGCATATAAAGTTTGCAATACCAAGGGGCCTCTCTTCCTAGTGA  186

seq1  TGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGACACAAGCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCCAACTAGGCCATCTTCTGCTATATATGCAGCTAGAGACACAAGCTC  236

seq1  TGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGAGATGCAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTACTGGTTAGTTCATATTGTTGTTCCACCTATAGAGATGCAGAC  286

seq1  CCCTTTAGCTCCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGGGCCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTTTAGCTCCTCCTTGGGTGCTTTCTCTAGCTTCTCCATTGGGGGCCC  336

seq1  TGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTCCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTTCCATCTTATAGATGACTGTGAGCATCCACTTCTGTATTTCCCAG  386

seq1  GCACTAGCATAGCCTCATACAAGACAGTTATACCACGGTCCTTTCAGCAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTAGCATAGCCTCATACAAGACAGTTATACCACGGTCCTTTCAGCAA  436

seq1  AATCTTTCTGGCTTATGCAATAGTGTCTGGGTTTGGTGGATGATTATGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTTCTGGCTTATGCAATAGTGTCTGGGTTTGGTGGATGATTATGGG  486

seq1  ATGGATCCCAGGTGGGGTAGTGTCTGGATGGTCCATCCTTTTGTCTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGATCCCAGGTGGGGTAGTGTCTGGATGGTCCATCCTTTTGTCTTAAC  536

seq1  TTCTAAGACCTTTAAAAAATAGTAAGCATTATTTAAATAATATAGCTTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAGACCTTTAAAAAATAGTAAGCATTATTTAAATAATATAGCTTGT  586

seq1  GATTTTCAGAATTTAATATCCATTTTAAAAATAACCTGGTGCTATTTTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTCAGAATTTAATATCCATTTTAAAAATAACCTGGTGCTATTTTAC  636

seq1  TTCCTGTGAAAATATGGAAATAAATTTAATGAATGTGTATCCCAAAGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGTGAAAATATGGAAATAAATTTAATGAATGTGTATCCCAAAGCTG  686

seq1  AATATTCATATTTGCATAATTTTAGGATGGGTATACAAATACACTTTCAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTCATATTTGCATAATTTTAGGATGGGTATACAAATACACTTTCAT  736

seq1  TTAATAACATTTCTTTATTCAAATAATAAAATTCTTAAAAATATTTAAGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAATAACATTTCTTTATTCAAATAATAAAATTCTTAAAAATATTTAAGA  786

seq1  GTACTGAGTTAACATCATTTGTATCAAGAAATGATGAAGAAACACTGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTGAGTTAACATCATTTGTATCAAGAAATGATGAAGAAACACTGATT  836

seq1  ACACAGGACACATATCCCCTTTTGAATAAACATGTGAAGTTCTTTATAAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGGACACATATCCCCTTTTGAATAAACATGTGAAGTTCTTTATAAG  886

seq1  CCCAGAGGAAGGTGTCCTCTGGGAAGAGTACAATATACTAACATTTCTCA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAGGAAGGTGTCCTCTGGGAAGAGTACAATATACTAACATTTCTCA  936

seq1  TAGTGAAGTAGAGGCACCTTAATAACCAGAATTTTTCTATCTCTGATTGT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAAGTAGAGGCACCTTAATAACCAGAATTTTTCTATCTCTGATTGT  986

seq1  AAATTTTATAATTCTGTGAGATATGACCACAGAATTC  1037
      |||||||||||||||||||||||||||||||||||||
seq2  AAATTTTATAATTCTGTGAGATATGACCACAGAATTC  1023