BAC Information

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BAC

Clone NameB6Ng01-246N22
Chromosome7 (Build37)
Map Location 7,445,856 - 7,447,041
singlet/doubletsinglet
Overlap geneLOC100041883
Upstream geneOlfr1348, Olfr1349, LOC665328, Olfr1350, Zim2, Zim1, Peg3, Usp29, LOC627961, Aurkc, LOC628030, LOC100041822, 5730403M16Rik, 2810409K11Rik, Vmn2r-ps35, Zfp418, BC023179, 6430701C03Rik, Clcn4-2, V2r15, LOC100041866, LOC100042577, Vmn2r31, Vmn2r-ps36, V2r5
Downstream geneEG628117, Vmn2r33, LOC665470, EG665474, EG628368, LOC100042636, LOC665485, EG625353, Vmn2r-ps40, Vmn2r36, LOC638170, LOC100042662, LOC100041942, LOC100042673, LOC100041949, LOC100042681, LOC100042688, LOC100042695, LOC100041956, LOC100041961
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-246N22.bB6Ng01-246N22.g
ACCGA055364GA055365
length1,1751,169
definitionB6Ng01-246N22.b B6Ng01-246N22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggttt
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctccatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatattttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttggccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtcaggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatatgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttccttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacttccttagttagagtcacgtccgagatattttatatta
tttgtggctattgagaaaggtgttgtttcccttattctttctcagcctgt
ttatttctgggtatagagaaagcatgacttgtttgagtttatttatatca
gctacttcacgaagctgtttatcagtttagagttctctgtagattttaag
tcactatatatactatcatatcatcgcaagtatattgaacttcgcttttc
acttgtatcgctttgagtatcgtga
gaattcactagctcaaactccttgatatagaaacaacactaaattaaaca
gatctgctgtgtgtatgtgtaaatattgatatgtgtgtgcacatgccaaa
gtagcacttgcattattgaatttaagtgattcctgtaacaaatgatatga
agaagtttgaatatgagagaaaatataatgcttatgtttgaatagcagga
aatgttaatgaaataagccctaagaagtatcctcctctggcaataattaa
tcaaaagttctggttattgttcatgagatgcactaattttagcactgaag
gaaaaaattatctctgtagatactttgtgctaaaagatccttcatgatcc
tcttaatagtgcatacttagcattttctcatatatttgtatttttttgtc
ttctatattaatcttacagagaacatagattttgcacctagcagtctcat
gagctaatccagcagattagaggttatattcagttcttcatgggctccta
ttgtgactgaaatctaatgtaaatgtagttttacgatagattatttattt
tgaaattcttgggcagaattcttgcaaattgcagttatattttctaaagt
atttctttatgaaatataatcttccatgaatttgcaataagtcaagatga
gggttaagtcacaggatatgttgtttgtttttgcaagacttttttttaag
gatttttgtatctacaactagtaaatttgataagtaatatattttatatc
tgcagtttcctttgagttgacttcatcatcccagtgtggaccaagagaaa
tccatatttgtaatatttatcagagcagcaaacactcacttgtctcatta
gaaatttcattttcagggcagggctgcaaacaaaacagcaggctgccatt
ccctccttccaaaatcttctgaatccaggactacattccgcactgcacac
agaggatggcatctgagaaaaaatagacatatgctgatacgagtttcata
tatttctttatgtttatatagcacttaagatttcatagctcattttgcac
actatctgatgacattcctatgtcaattattagttgacagaattgattat
ggaaatgcatggagagtgttgtaaggtcctaagtgtctagtaatcaagga
aaacacgctgaatttttga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_7445856_7447041
seq2: B6Ng01-246N22.g_67_1235

seq1  GAATTCACTAGCTCAAACTCCTTGATATAGAAACAACACTAAATTAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTAGCTCAAACTCCTTGATATAGAAACAACACTAAATTAAACA  50

seq1  GATCTGCTGTGTGTATGTGTAAATATTGATATGTGTGTGCACATGCCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTGCTGTGTGTATGTGTAAATATTGATATGTGTGTGCACATGCCAAA  100

seq1  GTAGCACTTGCATTATTGAATTTAAGTGATTCCTGTAACAAATGATATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCACTTGCATTATTGAATTTAAGTGATTCCTGTAACAAATGATATGA  150

seq1  AGAAGTTTGAATATGAGAGAAAATATAATGCTTATGTTTGAATAGCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGTTTGAATATGAGAGAAAATATAATGCTTATGTTTGAATAGCAGGA  200

seq1  AATGTTAATGAAATAAGCCCTAAGAAGTATCCTCCTCTGGCAATAATTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTAATGAAATAAGCCCTAAGAAGTATCCTCCTCTGGCAATAATTAA  250

seq1  TCAAAAGTTCTGGTTATTGTTCATGAGATGCACTAATTTTAGCACTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAAAGTTCTGGTTATTGTTCATGAGATGCACTAATTTTAGCACTGAAG  300

seq1  GAAAAAATTATCTCTGTAGATACTTTGTGCTAAAAGATCCTTCATGATCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAATTATCTCTGTAGATACTTTGTGCTAAAAGATCCTTCATGATCC  350

seq1  TCTTAATAGTGCATACTTAGCATTTTCTCATATATTTGTATTTTTTTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAATAGTGCATACTTAGCATTTTCTCATATATTTGTATTTTTTTGTC  400

seq1  TTCTATATTAATCTTACAGAGAACATAGATTTTGCACCTAGCAGTCTCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATATTAATCTTACAGAGAACATAGATTTTGCACCTAGCAGTCTCAT  450

seq1  GAGCTAATCCAGCAGATTAGAGGTTATATTCAGTTCTTCATGGGCTCCTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTAATCCAGCAGATTAGAGGTTATATTCAGTTCTTCATGGGCTCCTA  500

seq1  TTGTGACTGAAATCTAATGTAAATGTAGTTTTACGATAGATTATTTATTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGACTGAAATCTAATGTAAATGTAGTTTTACGATAGATTATTTATTT  550

seq1  TGAAATTCTTGGGCAGAATTCTTGCAAATTGCAGTTATATTTTCTAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAATTCTTGGGCAGAATTCTTGCAAATTGCAGTTATATTTTCTAAAGT  600

seq1  ATTTCTTTATGAAATATAATCTTCCATGAATTTGCAATAAGTCAAGATGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTTATGAAATATAATCTTCCATGAATTTGCAATAAGTCAAGATGA  650

seq1  GGGTTAAGTCACAGGATATGTTGTTTGTTTTTGCAAGACTTTTTTTTAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAGTCACAGGATATGTTGTTTGTTTTTGCAAGACTTTTTTTTAAG  700

seq1  GATTTTTGTATCTACAACTAGTAAATTTGATAAGTAATATATTTTATATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTTGTATCTACAACTAGTAAATTTGATAAGTAATATATTTTATATC  750

seq1  TGCAGTTTCCTTTGAGTTGACTTCATCATCCCAGTGTGGACCAAGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTTCCTTTGAGTTGACTTCATCATCCCAGTGTGGACCAAGAGAAA  800

seq1  TCCATATTTGTAATATTTATCAGAGCAGCAAACACTCACTTGTCTCATTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATATTTGTAATATTTATCAGAGCAGCAAACACTCACTTGTCTCATTA  850

seq1  GAAATTTCATTTTCAGGGCAGGGGCTGCAAACAAAACAGCAGGCTGCCAT  900
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  GAAATTTCATTTTCAGGGCA-GGGCTGCAAACAAAACAGCAGGCTGCCAT  899

seq1  TCCCTCCTTCCAAAATCTTCTGAATCCAGGACTACATTCCGCACTGCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCTTCCAAAATCTTCTGAATCCAGGACTACATTCCGCACTGCACA  949

seq1  CAGAGGATGGCATCTGAGAAAAAATTAGACATATGCTGATAACGAGTTTC  1000
      |||||||||||||||||||||||| ||||||||||||||| |||||||||
seq2  CAGAGGATGGCATCTGAGAAAAAA-TAGACATATGCTGAT-ACGAGTTTC  997

seq1  ATATATTTCTTTTATGTTTTATATTAGCACTTTAAGATTTCAATAAGCTC  1050
      ||||||||| |||||| |||||| |||||| |||||||||||   |||||
seq2  ATATATTTC-TTTATG-TTTATA-TAGCAC-TTAAGATTTCA--TAGCTC  1041

seq1  ATTTTTGCACACTATCTGATTGACATTTCCCTATGTCCATTATTTAGTGG  1100
      | ||||||||||||||||| |||||||  |||||||| |||| ||||| |
seq2  A-TTTTGCACACTATCTGA-TGACATT--CCTATGTCAATTA-TTAGTTG  1086

seq1  CCAGATATGAATATTGGAAATGCATTGAGGAAATGTTGTATAGTTTCTAA  1150
       ||||  ||| || ||||||||||| |||  | ||||||| || | ||||
seq2  ACAGAATTGATTA-TGGAAATGCATGGAG--AGTGTTGTA-AGGTCCTAA  1132

seq1  GTGTCTAGTAATTCAGGAAAAACAGCTG-ATTTTTGA  1186
      ||||||||||||  |||||||   |||| ||||||||
seq2  GTGTCTAGTAATCAAGGAAAACACGCTGAATTTTTGA  1169