BAC Information

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BAC

Clone NameB6Ng01-249J09
Chromosome7 (Build37)
Map Location 22,024,381 - 22,025,062
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937, LOC100043588
Downstream geneLOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472, EG667094
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-249J09.bB6Ng01-249J09.g
ACCGA057368GA057369
length1,142596
definitionB6Ng01-249J09.b B6Ng01-249J09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgccctgccttaaccacttgttgacattcctcgtcctttaag
cacgatcttaacagcttccacaatggcatggttcctgctttaagtttgcc
attctccagttccctaactaaatctcctttgagtttctcccaagagggga
tagttaaggtccctgagcacgcaaaccacggtgctatgcgatctacctct
tttacaaagccttctagtgtcttggtggcgactttcaagccacactgctt
caggaccgaccgtaaggtggtcaccacagagtgggaggcccccatactgg
tcgctgtccaggcctgaccgcgactgagaaccagtcagcaataccaccgg
tggaaatagtatgtagtcaaaagaaaaagaacaagccctgtgaaaaggaa
cagaaaggcttctaacgctggagaaagttcaagacagaacgtaccttgta
gagctgtaaagtgtcccgtagttctgaacccgccccgtgaatcggggggg
gggtctcctatcagggcctggtgatgataaattcccgggtttcttggcgc
cacttcttgcccaagttagtatcttgccggcaagaattcacttggacaac
aggatccttctacggcaaagcttttcttgcttcaacataaggaagacccc
gaactggaaaatggtgctgcttatatagcccgcagcatgacgtttcagca
cctgatgtggcgtgacagcacctgattagttgctcgtccatcaccccatt
actacgccccgagatgggcagtgactgggcgtgaatttactcttgcactt
gcgcataaggcttgtttactagctaggcgcagtggaagccagcaccatct
tataatggcgattgctcacggcacagttctccacactgggcacatatcca
gaagatgttacaactgttaataagaacacatgctccactatgttcatagc
agcctttggtttttgttctgcatcaaaaagctctgattctttgagcaagt
aagagctttctgtagttgctcctttatcaataagaaatattttatatcat
gtttatttcttagttttgaagagatcagctttctatacactgggggaatt
tacaggtcattactcaattcagaacttattttttaactggga
gaattcaaaattgacatgattgatttttatgtaaaagtttagatttgtga
ttcctttaagcttttttcagattattttagagataaataataaaattctt
gtccctttctttgtaatttctgccttccaagaagagaaacttgatgagaa
aactgccttgcttgtgtacactttgtgaatttataataagttccttactt
ataaatgtacctaggttatatgccagcaagattttgatgaagggactctg
gtatatctgtctcgtatgaggctatgccagtgcctggcaaatacagatgt
ggatgctcacagtcatctgtaagatggaacacagggcccccaatggagaa
gctagagaaagcacccaaggagctgaaggggtctgcaaccctattggtgg
aacaacaatatgaactaaccagtacccccagagcttatatctctagctgc
atatgtagcagaagatggcctagtcagccatcactgggaagggaggcccc
tggtattgcaaactttttatgtcccagtacacaggaatgccagggtcaag
aagcaggagtgggttggtaggggagcagggcatggggggagggtat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_22024381_22025062
seq2: B6Ng01-249J09.b_504_1185

seq1  GTGTCCCGTAGTTCTGAACCCGCCCCGTGAATCGGGGGGGGGGTCTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCCGTAGTTCTGAACCCGCCCCGTGAATCGGGGGGGGGGTCTCCTA  50

seq1  TCAGGGCCTGGTGATGATAAATTCCCGGGTTTCTTGGCGCCACTTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGCCTGGTGATGATAAATTCCCGGGTTTCTTGGCGCCACTTCTTGC  100

seq1  CCAAGTTAGTATCTTGCCGGCAAGAATTCACTTGGACAACAGGATCCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGTTAGTATCTTGCCGGCAAGAATTCACTTGGACAACAGGATCCTTC  150

seq1  TACGGCAAAGCTTTTCTTGCTTCAACATAAGGAAGACCCCGAACTGGAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGGCAAAGCTTTTCTTGCTTCAACATAAGGAAGACCCCGAACTGGAAA  200

seq1  ATGGTGCTGCTTATATAGCCCGCAGCATGACGTTTCAGCACCTGATGTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGCTTATATAGCCCGCAGCATGACGTTTCAGCACCTGATGTGG  250

seq1  CGTGACAGCACCTGATTAGTTGCTCGTCCATCACCCCATTACTACGCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGACAGCACCTGATTAGTTGCTCGTCCATCACCCCATTACTACGCCCC  300

seq1  GAGATGGGCAGTGACTGGGCGTGAATTTACTCTTGCACTTGCGCATAAGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGGCAGTGACTGGGCGTGAATTTACTCTTGCACTTGCGCATAAGG  350

seq1  CTTGTTTACTAGCTAGGCGCAGTGGAAGCCAGCACCATCTTATAATGGCG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTTTACTAGCTAGGCGCAGTGGAAGCCAGCACCATCTTATAATGGCG  400

seq1  ATTGCTCACGGCACAGTTCTCCACACTGGGCACATATCCAGAAGATGTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCTCACGGCACAGTTCTCCACACTGGGCACATATCCAGAAGATGTTA  450

seq1  CAACTGTTAATAAGAACACATGCTCCACTATGTTCATAGCAGCCTTTGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTGTTAATAAGAACACATGCTCCACTATGTTCATAGCAGCCTTTGGT  500

seq1  TTTTGTTCTGCATCAAAAGGCTCTGATTCCTTTGAGCAAGTAAGAGCTTT  550
      |||||||||||||||||| ||||||||| |||||||||||||||||||||
seq2  TTTTGTTCTGCATCAAAAAGCTCTGATT-CTTTGAGCAAGTAAGAGCTTT  549

seq1  CTGTAGTTGCTCCTTTATCAATA--GAATATTTTATATCATGTTGTATTT  598
      |||||||||||||||||||||||   |||||||||||||||||| |||||
seq2  CTGTAGTTGCTCCTTTATCAATAAGAAATATTTTATATCATGTT-TATTT  598

seq1  CCTAGGTTTTGA--AGATCAGCTTTTCTTATACACTGGGGATATTTTACA  646
      | || |||||||  |||||||||||   ||||||||||||  | ||||||
seq2  CTTA-GTTTTGAAGAGATCAGCTTT--CTATACACTGGGG-GAATTTACA  644

seq1  -GTCATTACTCAATTCAGAACTTA-TTTTTAACTGGGA  682
       ||||||||||||||||||||||| |||||||||||||
seq2  GGTCATTACTCAATTCAGAACTTATTTTTTAACTGGGA  682