BAC Information

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BAC

Clone NameB6Ng01-250B23
Chromosome7 (Build37)
Map Location 124,774,161 - 124,775,275
singlet/doubletsinglet
Overlap geneXylt1
Upstream geneLOC546993, LOC100043330
Downstream geneLOC669758, Rps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-250B23.bB6Ng01-250B23.g
ACCGA057755GA057756
length7661,111
definitionB6Ng01-250B23.b B6Ng01-250B23.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagaggaatctcaaatgaccaagaagcactttaaaaatgt
tcaacatctttaatcatcagggaagtgcatatcaaaatgaccctgagatt
ccacctcacaccaatcagaatggctaggatcaaaaactcaggtgacagca
gatgctggtgaggatgtggggaaagaggaacactccactattgctggtgg
gattgcaaacttgtaaaaccactctgaaaattaatctggtggtttctcag
aaaattggaaatagttccacctgaagacccagctataccactcttgggta
tataccttaaagatgctccaccaaacctgacaaggacactgctccactat
gctcatagcagctttgttcctaagagccagaaactggaaacaaactagat
gctcctcaactaaagaatggataaagaaaacgtgtctcatttatacaatg
gactactattcagctattaaaaacaaggacatcatgaattttgcaggcaa
attgatggaactagaaaatatcatcctgagtaaggtaacccagaccaaaa
ggacaggccaatgtgtactcactgataagtggatattagccataaagtac
agaatactcatgacatacccccacagacccaaagaagttaaacaagaaga
aagggtcaagggaggatgcttgaattacggctagaagggggaataaagta
gtcagagaaggcagatgaagggaagtaactgggtgggagaagggatgggg
agaagaatgggggtac

gaattcaggaggctgggactgggtgtcacttatcaatgggagtccgttga
aggttgtccctgaccctcgcttggatgactagtgcttactaaatgctttg
taaagcccttgcagaggcatctcatttgggaggctgttgggactagtatt
atgggttcatggagatgtgctgagccaggatcagtacctggctcttcaca
tagtgcctgtgttgttttggcgccacctgttgcccagatgccccagggta
accatggcaatgagaagtaaagctgaaaggatggagtgaacagaaatccc
ttctgtccattatgaatcctgtagatgctaactagtgctcagccattgtg
ggagaggaggcgggagccaacacctacaaagagagggtgtctgtagactt
acgttgtcctccagcttcatccttcatgtttcatgttatgatgagtgcac
aagacagggaaaataaaaatttttaaattaaatagttggctcaaagtgtt
gactctgctcccctgatgctcccagattcttggctgctgccatcttccaa
agcaaaacaaagtcctcctcggtagtgcctgtggcatgagaaacttctga
tcttgaggaatgtgatgtctttatttactcattttaaccaaaatgcatac
ttgcagcttattctgtttgaaatggcagtaaacatggaacccagtccccc
aaggacatgagcatttcattttggagatgattcatacatgcatttgggta
ttatgatcccggacagcacattaaaattacaacatgctgttagcccataa
tggaatgtggagtttacatgctgttccatggaaaggaggaatttgcttgg
cccctcacccatctctctgatagcatggtattcatttggacctttcacag
aagttatctgaaatttaagattttacatggctctgtgcagccagtggata
ctattgtgtgattattagtagccagagtcaaggcaggatttgatatttca
aagctcatggcttcctttcagagtcagcatgcttttgtgatggatagtgt
ggctaaacaatagctctattggatccccgggtagaatgggtctttatgta
tgaatctcatt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124774161_124775275
seq2: B6Ng01-250B23.g_66_1176

seq1  GAATTCAGGAGGCTGGGACTGGGTGTCACTTATCAATGGGAGTCCGTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGAGGCTGGGACTGGGTGTCACTTATCAATGGGAGTCCGTTGA  50

seq1  AGGTTGTCCCTGACCCTCGCTTGGATGACTAGTGCTTACTAAATGCTTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTGTCCCTGACCCTCGCTTGGATGACTAGTGCTTACTAAATGCTTTG  100

seq1  TAAAGCCCTTGCAGAGGCATCTCATTTGGGAGGCTGTTGGGACTAGTATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGCCCTTGCAGAGGCATCTCATTTGGGAGGCTGTTGGGACTAGTATT  150

seq1  ATGGGTTCATGGAGATGTGCTGAGCCAGGATCAGTACCTGGCTCTTCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGTTCATGGAGATGTGCTGAGCCAGGATCAGTACCTGGCTCTTCACA  200

seq1  TAGTGCCTGTGTTGTTTTGGCGCCACCTGTTGCCCAGATGCCCCAGGGTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGCCTGTGTTGTTTTGGCGCCACCTGTTGCCCAGATGCCCCAGGGTA  250

seq1  ACCATGGCAATGAGAAGTAAAGCTGAAAGGATGGAGTGAACAGAAATCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGGCAATGAGAAGTAAAGCTGAAAGGATGGAGTGAACAGAAATCCC  300

seq1  TTCTGTCCATTATGAATCCTGTAGATGCTAACTAGTGCTCAGCCATTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTCCATTATGAATCCTGTAGATGCTAACTAGTGCTCAGCCATTGTG  350

seq1  GGAGAGGAGGCGGGAGCCAACACCTACAAAGAGAGGGTGTCTGTAGACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGGAGGCGGGAGCCAACACCTACAAAGAGAGGGTGTCTGTAGACTT  400

seq1  ACGTTGTCCTCCAGCTTCATCCTTCATGTTTCATGTTATGATGAGTGCAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTGTCCTCCAGCTTCATCCTTCATGTTTCATGTTATGATGAGTGCAC  450

seq1  AAGACAGGGAAAATAAAAATTTTTAAATTAAATAGTTGGCTCAAAGTGTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACAGGGAAAATAAAAATTTTTAAATTAAATAGTTGGCTCAAAGTGTT  500

seq1  GACTCTGCTCCCCTGATGCTCCCAGATTCTTGGCTGCTGCCATCTTCCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCTGCTCCCCTGATGCTCCCAGATTCTTGGCTGCTGCCATCTTCCAA  550

seq1  AGCAAAACAAAGTCCTCCTCGGTAGTGCCTGTGGCATGAGAAACTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAACAAAGTCCTCCTCGGTAGTGCCTGTGGCATGAGAAACTTCTGA  600

seq1  TCTTGAGGAATGTGATGTCTTTATTTACTCATTTTAACCAAAATGCATAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGAATGTGATGTCTTTATTTACTCATTTTAACCAAAATGCATAC  650

seq1  TTGCAGCTTATTCTGTTTGAAATGGCAGTAAACATGGAACCCAGTCCCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCTTATTCTGTTTGAAATGGCAGTAAACATGGAACCCAGTCCCCC  700

seq1  AAGGACATGAGCATTTCATTTTGGAGATGATTCATACATGCATTTGGGTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATGAGCATTTCATTTTGGAGATGATTCATACATGCATTTGGGTA  750

seq1  TTATGATCCCGGACAGCACATTAAAATTACAACATGCTGTTAGCCCATAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGATCCCGGACAGCACATTAAAATTACAACATGCTGTTAGCCCATAA  800

seq1  TGGAATGTGGAGTTTACATGCTGTTCCATGG-AAGGAGGAATTTGCTTGG  849
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TGGAATGTGGAGTTTACATGCTGTTCCATGGAAAGGAGGAATTTGCTTGG  850

seq1  CCCCTCACCCATCTCTCTGATAGCATGGTATTCATTTGGACC-TTCACAG  898
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  CCCCTCACCCATCTCTCTGATAGCATGGTATTCATTTGGACCTTTCACAG  900

seq1  AAGTTATCTGAAATTTAAGATTTTACATGGCTCTGTGCAGCCAGTGGATA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTATCTGAAATTTAAGATTTTACATGGCTCTGTGCAGCCAGTGGATA  950

seq1  CTATTGTGTGATTATTAGTAGCCAGAGTCAAGGCAGGATTTGATATTTCA  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTGTGTGATTATTAGTAGCCAGAGTCAAGGCAGGATTTGATATTTCA  1000

seq1  AAGCTCATGGCTTCCTTTCAGAGTCCAGCATGCTTTTGTGGAAGGGATAG  1048
      |||||||||||||||||||||||| |||||||||||||||  | ||||||
seq2  AAGCTCATGGCTTCCTTTCAGAGT-CAGCATGCTTTTGTG--ATGGATAG  1047

seq1  TGTGGCTAAAACCAATAGCTCCTATTGGATTCCCCGGGTAGAATGGGTCT  1098
      ||||||||||  |||||||| |||||||| ||||||||||||||||||||
seq2  TGTGGCTAAA--CAATAGCT-CTATTGGA-TCCCCGGGTAGAATGGGTCT  1093

seq1  TTATGTATG-ATCTCATT  1115
      ||||||||| ||||||||
seq2  TTATGTATGAATCTCATT  1111


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