BAC Information

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BAC

Clone NameB6Ng01-251J20
Chromosome7 (Build37)
Map Location 87,702,750 - 87,870,722
singlet/doubletdoublet
Overlap geneCrtc3, Iqgap1
Upstream geneRhcg, 5730590G19Rik, Plin, Pex11a, EG626359, EG665900, Mesp1, Mesp2, Anpep, Ap3s2, 2610034B18Rik, Zfp710, Idh2, Sema4b, Cib1, D330012F22Rik, LOC100042374, LOC100042379, Ttll13, Ngrn, Vps33b, Prc1, Rccd1, Unc45a, Hddc3, Man2a2, Fes, Furin, LOC384647, Blm
Downstream geneLOC100042402, Zscan2, Wdr73, Nmb, Sec11a, Zfp592, Alpk3, Slc28a1, EG623286, LOC100043130, Pde8a, EG636544, Rps17, Cpeb1, LOC623355, Ap3b2, BC048679, Fsd2, Whdc1, Homer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-251J20.bB6Ng01-251J20.g
ACCGA058825GA058826
length507570
definitionB6Ng01-251J20.b B6Ng01-251J20.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(87,870,210 - 87,870,722)(87,702,750 - 87,703,314)
sequence
ttccctgcccccgctccactgtgggtccctgctccttgtgcagcacccct
gtggaaaagcatctgtggggtaagggtgcttcagctgctgcttagatccg
gtgacaaggagatagaacataccaccatgttgaaacacattcccatctcg
ttacagtacaaaacgtttaattgtggatgtcatccggttccagccaggag
agaccttgactgaaattctagaaaccccagccaccaatgaacaggtacag
atgaaggtttcacactcatcttcttaaacatgataagcttttctgtgaca
gttgcgttcctgaatggggtcagtgggacagggaagggattagaccctag
ggtgagcatgggtctaacctcgggacagtaataattagggctcatttgtc
tgggaagttggtgactcctaaatccagatggtgcattcagggcacgacag
cccctttcccttcaaacagaagagaaatggggagggaggcggagagggag
agggagt
tccgcggaattccttcccaccaaccttcttagcccctccttcctctctct
ccccttccccaacccttccccaccactttttctacccagcggccggtcgc
tcgctcagcctgttccaggccacttcaggccctgtgtgtgcactctggac
ttttctcctgcaagtgtcaccacggttattgtctatcttcaggatgcacc
gaccgaagcttagataggtagctctgtccttcaaaaatggtgtctggtca
tctacagagcaccaagagcctgccttggtgtctggcccaggttgtgctca
ctgtatcttaagtgtgtgaatgaagaaatgaacgaatgaacgggaagagt
ccttgacgcagtctcaggactcgaagctcagtattctcagaagttcctca
gagggtgagattttatggtctgcagttcccatcgatgactctgggtggtg
cccagtaacatcttcccagggcccctaatggggctgctctctcagcaggt
cactggaaaggttgctgagatgagcagtggatgggaaggcaggctggccg
gggtggggtgggagtaattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_87870210_87870722
seq2: B6Ng01-251J20.b_47_559 (reverse)

seq1  ACTCCCTCTCCCTCTCCGCCTCCCTCCCCATTTCTCTTCTGTTTGAAGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCCTCTCCCTCTCCGCCTCCCTCCCCATTTCTCTTCTGTTTGAAGGG  50

seq1  AAAGGGGCTGTCGTGCCCTGAATGCACCATCTGGATTTAGGAGTCACCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGCTGTCGTGCCCTGAATGCACCATCTGGATTTAGGAGTCACCAA  100

seq1  CTTCCCAGACAAATGAGCCCTAATTATTACTGTCCCGAGGTTAGACCCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCCAGACAAATGAGCCCTAATTATTACTGTCCCGAGGTTAGACCCAT  150

seq1  GCTCACCCTAGGGTCTAATCCCTTCCCTGTCCCACTGACCCCATTCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCACCCTAGGGTCTAATCCCTTCCCTGTCCCACTGACCCCATTCAGGA  200

seq1  ACGCAACTGTCACAGAAAAGCTTATCATGTTTAAGAAGATGAGTGTGAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAACTGTCACAGAAAAGCTTATCATGTTTAAGAAGATGAGTGTGAAA  250

seq1  CCTTCATCTGTACCTGTTCATTGGTGGCTGGGGTTTCTAGAATTTCAGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCATCTGTACCTGTTCATTGGTGGCTGGGGTTTCTAGAATTTCAGTC  300

seq1  AAGGTCTCTCCTGGCTGGAACCGGATGACATCCACAATTAAACGTTTTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTCTCTCCTGGCTGGAACCGGATGACATCCACAATTAAACGTTTTGT  350

seq1  ACTGTAACGAGATGGGAATGTGTTTCAACATGGTGGTATGTTCTATCTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTAACGAGATGGGAATGTGTTTCAACATGGTGGTATGTTCTATCTCC  400

seq1  TTGTCACCGGATCTAAGCAGCAGCTGAAGCACCCTTACCCCACAGATGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCACCGGATCTAAGCAGCAGCTGAAGCACCCTTACCCCACAGATGCT  450

seq1  TTTCCACAGGGGTGCTGCACAAGGAGCAGGGACCCACAGTGGAGCGGGGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAGGGGTGCTGCACAAGGAGCAGGGACCCACAGTGGAGCGGGGG  500

seq1  CAGGGAAGAATTC  513
      |||||||||||||
seq2  CAGGGAAGAATTC  513

seq1: chr7_87702750_87703314
seq2: B6Ng01-251J20.g_66_630

seq1  GGAATTCCTTCCCACCAACCTTCTTAGCCCCTCCTTCCTCTCTCTCCCCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATTCCTTCCCACCAACCTTCTTAGCCCCTCCTTCCTCTCTCTCCCCT  50

seq1  TCCCCAACCCTTCCCCACCACTTTTTCTACCCAGCGGCCGGTCGCTCGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCAACCCTTCCCCACCACTTTTTCTACCCAGCGGCCGGTCGCTCGCT  100

seq1  CAGCCTGTTCCAGGCCACTTCAGGCCCTGTGTGTGCACTCTGGACTTTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCTGTTCCAGGCCACTTCAGGCCCTGTGTGTGCACTCTGGACTTTTC  150

seq1  TCCTGCAAGTGTCACCACGGTTATTGTCTATCTTCAGGATGCACCGACCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGCAAGTGTCACCACGGTTATTGTCTATCTTCAGGATGCACCGACCG  200

seq1  AAGCTTAGATAGGTAGCTCTGTCCTTCAAAAATGGTGTCTGGTCATCTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTAGATAGGTAGCTCTGTCCTTCAAAAATGGTGTCTGGTCATCTAC  250

seq1  AGAGCACCAAGAGCCTGCCTTGGTGTCTGGCCCAGGTTGTGCTCACTGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCACCAAGAGCCTGCCTTGGTGTCTGGCCCAGGTTGTGCTCACTGTA  300

seq1  TCTTAAGTGTGTGAATGAAGAAATGAACGAATGAACGGGAAGAGTCCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGTGTGTGAATGAAGAAATGAACGAATGAACGGGAAGAGTCCTTG  350

seq1  ACGCAGTCTCAGGACTCGAAGCTCAGTATTCTCAGAAGTTCCTCAGAGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCAGTCTCAGGACTCGAAGCTCAGTATTCTCAGAAGTTCCTCAGAGGG  400

seq1  TGAGATTTTATGGTCTGCAGTTCCCATCGATGACTCTGGGTGGTGCCCAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTTTATGGTCTGCAGTTCCCATCGATGACTCTGGGTGGTGCCCAG  450

seq1  TAACATCTTCCCAGGGCCCCTAATGGGGCTGCTCTCTCAGCAGGTCACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATCTTCCCAGGGCCCCTAATGGGGCTGCTCTCTCAGCAGGTCACTG  500

seq1  GAAAGGTTGCTGAGATGAGCAGTGGATGGGAAGGCAGGCTGGCCGGGGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGGTTGCTGAGATGAGCAGTGGATGGGAAGGCAGGCTGGCCGGGGTG  550

seq1  GGGTGGGAGTAATTG  565
      |||||||||||||||
seq2  GGGTGGGAGTAATTG  565