BAC Information

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BAC

Clone NameB6Ng01-252P15
Chromosome7 (Build37)
Map Location 126,191,977 - 126,309,473
singlet/doubletdoublet
Overlap geneGpr139
Upstream geneRps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
Downstream geneLOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159, Zp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-252P15.bB6Ng01-252P15.g
ACCGA059832GA059833
length1,1811,062
definitionB6Ng01-252P15.b B6Ng01-252P15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(126,191,977 - 126,193,156)(126,308,405 - 126,309,473)
sequence
gaattcacactctgtagaccaggctggcctcagactcacggaaatctgct
tgcctctgtctcttctgcctcccaagttctaggattaaaggaatgcaccg
ccactatctggcatcaccaactgcttcctaaacacatgctatttgtgcaa
actcctctgcttccaaacacacgacactcaccttccatgcccacatcacc
tgctttccaaaaacacagcatctgctttccaagcacatgccatccacgca
aactcctctgtctccatgcacacaccatctgtcagctcaggtccagtatc
gctgaaaggttcactctcaaagcaaagtgctttttctgctaacctcatta
tttcttccaatagagccaggaaaggccatcatctttaaaaactgctcagg
cccagccagaaatgtttttcagcactgtttgctttcagagagcaaaagca
caatcattgccttctaggttagccaatgaccaaaggagaggaaataaaac
aaaaactgtctctgagcttttgagatgaggggcctgtctttagatcggca
gaggttagacacatgaaaatgggagtgtggagaagctgggaagtgaatgt
ggccaactcccctaggcttgtcaggtctctgggctcctgaactcatggaa
ggtttgtctggtgggggatgggccctcagaactgttgctggagaaactca
caagtctgcggtgatgtccttggttggcttctattttcaagtgtcttgtc
aactgtggtcaggcgttaactaattcaggatcctgggaaatggcccctct
gtgagcaggggttgggagggcatacacaacctcttccccctaggttctct
agtgcaggaatctgcagacccctttcccttgggccaaatcaagccagcca
cttacatttgttagtaaagttttgttgacacatacctgtcctcatatgct
tacatactgtctatggctatagatacagccgtgcatgttcggatagtcac
aacagaaaattctgtgaccttcaaagtctgaagcattctatttatctctc
catttacagaagcagatttttctaattttctatttattaatggattgttt
gcctgcaatgtatgtttgggtggctacatgagcctgtgaaagaattgaag
aggcctagaatctccaggactgtgagttaga
gaattctcatccttcattcccctgcggtccacacagcagccatgcctgtc
ctcttacggctctgcaaacacagcatgtgttcacacttctgtgactttgt
acttgtgactccaccaccagaaaagaaacccactcttctctaatttgacc
agagtgcctttattcattttggggagtcagaaagcagggaaatggcaggg
ccccctagaatggtgaatagctgatgttggtacccatgatagtagctgcc
caggggaaacaagagcaacatttccgacttgcagattgtgtggatatcaa
tgaaagctatggtgcctccttaaagaatcgtggcaactgacatattgcaa
ttggggaagacatgggttcaaattcagactgctacttagttagaagtgac
tttgaggcagtcactaaacctaagcccacatgttctccattacagaaggg
tctaataaaccccatcttcagagtgaggggcacagcagtgacccctgacc
atggagctctgtccaccatttctagcttgtcaggagaaactgctaaatgg
aagctactctgatgatcatgaccacatactttgtggcaggaaaggtcgta
aaatcatttattgccacagtcctcatttttacagctcctgaagtgattat
ttactgtttctctaatttctagggagggggcaagtccttttcccacagac
gattagtgtcctgccttgcatgtggcatttttgctcagggcttaaaatga
cagtttgcttcatcataggcaaggttatagcaaggctgggggacatcagg
ctgtcgctgatggtgggtgaaccagctgattcatgaaggacaagcaagag
tcatccagatgacggacaggaggactataggaggagaggagtgtgcaggc
aaagacagaaaggctggagagagtgtgtcgtgcttggacagctttgtttc
tccatagagtggacagagtagtgagtacgggcgtggtggcgcacgcttta
atcccagcactggggagcagagcaggcagatttctgagtttgagccagct
gtctacagagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126191977_126193156
seq2: B6Ng01-252P15.b_50_1230

seq1  GAATTCACACTCTGTAGACCAGGCTGGCCTCAGACTCACGGAAATCTGCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACTCTGTAGACCAGGCTGGCCTCAGACTCACGGAAATCTGCT  50

seq1  TGCCTCTGTCTCTTCTGCCTCCCAAGTTCTAGGATTAAAGGAATGCACCG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTCTGTCTCTTCTGCCTCCCAAGTTCTAGGATTAAAGGAATGCACCG  100

seq1  CCACTATCTGGCATCACCAACTGCTTCCTAAACACATGCTATTTGTGCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTATCTGGCATCACCAACTGCTTCCTAAACACATGCTATTTGTGCAA  150

seq1  ACTCCTCTGCTTCCAAACACACGACACTCACCTTCCATGCCCACATCACC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCTCTGCTTCCAAACACACGACACTCACCTTCCATGCCCACATCACC  200

seq1  TGCTTTCCAAAAACACAGCATCTGCTTTCCAAGCACATGCCATCCACGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTCCAAAAACACAGCATCTGCTTTCCAAGCACATGCCATCCACGCA  250

seq1  AACTCCTCTGTCTCCATGCACACACCATCTGTCAGCTCAGGTCCAGTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCCTCTGTCTCCATGCACACACCATCTGTCAGCTCAGGTCCAGTATC  300

seq1  GCTGAAAGGTTCACTCTCAAAGCAAAGTGCTTTTTCTGCTAACCTCATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGAAAGGTTCACTCTCAAAGCAAAGTGCTTTTTCTGCTAACCTCATTA  350

seq1  TTTCTTCCAATAGAGCCAGGAAAGGCCATCATCTTTAAAAACTGCTCAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTCCAATAGAGCCAGGAAAGGCCATCATCTTTAAAAACTGCTCAGG  400

seq1  CCCAGCCAGAAATGTTTTTCAGCACTGTTTGCTTTCAGAGAGCAAAAGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGCCAGAAATGTTTTTCAGCACTGTTTGCTTTCAGAGAGCAAAAGCA  450

seq1  CAATCATTGCCTTCTAGGTTAGCCAATGACCAAAGGAGAGGAAATAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCATTGCCTTCTAGGTTAGCCAATGACCAAAGGAGAGGAAATAAAAC  500

seq1  AAAAACTGTCTCTGAGCTTTTGAGATGAGGGGCCTGTCTTTAGATCGGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACTGTCTCTGAGCTTTTGAGATGAGGGGCCTGTCTTTAGATCGGCA  550

seq1  GAGGTTAGACACATGAAAATGGGAGTGTGGAGAAGCTGGGAAGTGAATGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTTAGACACATGAAAATGGGAGTGTGGAGAAGCTGGGAAGTGAATGT  600

seq1  GGCCAACTCCCCTAGGCTTGTCAGGTCTCTGGGCTCCTGAACTCATGGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAACTCCCCTAGGCTTGTCAGGTCTCTGGGCTCCTGAACTCATGGAA  650

seq1  GGTTTGTCTGGTGGGGGATGGGCCCTCAGAACTGTTGCTGGAGAAACTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTGTCTGGTGGGGGATGGGCCCTCAGAACTGTTGCTGGAGAAACTCA  700

seq1  CAAGTCTGCGGTGATGTCCTTGGTTGGCTTCTATTTTCAAGTGTCTTGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCTGCGGTGATGTCCTTGGTTGGCTTCTATTTTCAAGTGTCTTGTC  750

seq1  AACTGTGGTCAGGCGTTAACTAATTCAGGATCCTGGGAAATGGCCCCTCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGTGGTCAGGCGTTAACTAATTCAGGATCCTGGGAAATGGCCCCTCT  800

seq1  GTGAGCAGGGGTTGGGAGGGCATACACAACCTCTTCCCCCTAGGTTCTCT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCAGGGGTTGGGAGGGCATACACAACCTCTTCCCCCTAGGTTCTCT  850

seq1  AGTGCAGGAATCTGCAGACCCCTTTCCCTT-GGCCAAATCAAGCCAGCCA  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGTGCAGGAATCTGCAGACCCCTTTCCCTTGGGCCAAATCAAGCCAGCCA  900

seq1  CTTACATTTGTTAGTAAAGTTTTGTTGACACATACCTGTCCTCATATGCT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACATTTGTTAGTAAAGTTTTGTTGACACATACCTGTCCTCATATGCT  950

seq1  TACATACTGTCTATGGCTATAGATACAGCCGTGCATGTTCGAATAGTCAC  999
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TACATACTGTCTATGGCTATAGATACAGCCGTGCATGTTCGGATAGTCAC  1000

seq1  AACAG-AAATTCTGTGACCTTCAAAGTCTGAAGCA-TCTA-TTATCTCTT  1046
      ||||| ||||||||||||||||||||||||||||| |||| |||||||| 
seq2  AACAGAAAATTCTGTGACCTTCAAAGTCTGAAGCATTCTATTTATCTCTC  1050

seq1  CATTTACAGAGCAAGTTTTTTCTAATTTTCTTATTTATTTATTGTGATTG  1096
      ||||||||||   || |||||||||||||| |||||||| ||   |||||
seq2  CATTTACAGAAGCAGATTTTTCTAATTTTC-TATTTATTAAT--GGATTG  1097

seq1  TTTTGCCTGC-ATGTATGTTTGTGT-GCTACATGGTGCCTGTG-AAGATT  1143
       ||||||||| ||||||||||| || ||||||| | ||||||| |||| |
seq2  -TTTGCCTGCAATGTATGTTTGGGTGGCTACAT-GAGCCTGTGAAAGAAT  1145

seq1  AGAAGAGGGCACTAG-ATCTCCAGGACCTGGAGTTAGA  1180
       |||||||   |||| |||||||||||   ||||||||
seq2  TGAAGAGG--CCTAGAATCTCCAGGACTGTGAGTTAGA  1181

seq1: chr7_126308405_126309473
seq2: B6Ng01-252P15.g_68_1129 (reverse)

seq1  CACTCTGTAGACCAGGCTGGCCTCAAACTCAGAAATCTGCCTGCCTCTGC  50
      ||||||||||||   ||||| |||||||||||||||||||||| ||||| 
seq2  CACTCTGTAGAC--AGCTGG-CTCAAACTCAGAAATCTGCCTG-CTCTG-  45

seq1  CTCCCAAGTGCTGGGATTAAAAGCGTGCGCCACCACCGCCCGTACTCACT  100
      ||||| |||||||||||| |||||||||||||||| ||||||||||||||
seq2  CTCCCCAGTGCTGGGATT-AAAGCGTGCGCCACCA-CGCCCGTACTCACT  93

seq1  ACTCTTGTCCACTCTATGGAGAAACAAAGCTGTCCAAGCACGACACACTC  150
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTC-TGTCCACTCTATGGAGAAACAAAGCTGTCCAAGCACGACACACTC  142

seq1  TCTCCAGCC-TTCTGTCTTTGCCTGCACACTCCTCTCCTCCTATAGTCCT  199
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCAGCCTTTCTGTCTTTGCCTGCACACTCCTCTCCTCCTATAGTCCT  192

seq1  CCTGTCCGTCATCTGGATGACTCTTGCTTGTCCTTCATGAATCAGCTGGT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTCCGTCATCTGGATGACTCTTGCTTGTCCTTCATGAATCAGCTGGT  242

seq1  TCACCCACCATCAGCGACAGCCTGATGTCCCCCAGCCTTGCTATAACCTT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCCACCATCAGCGACAGCCTGATGTCCCCCAGCCTTGCTATAACCTT  292

seq1  GCCTATGATGAAGCAAACTGTCATTTTAAGCCCTGAGCAAAAATGCCACA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTATGATGAAGCAAACTGTCATTTTAAGCCCTGAGCAAAAATGCCACA  342

seq1  TGCAAGGCAGGACACTAATCGTCTGTGGGAAAAGGACTTGCCCCCTCCCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGGCAGGACACTAATCGTCTGTGGGAAAAGGACTTGCCCCCTCCCT  392

seq1  AGAAATTAGAGAAACAGTAAATAATCACTTCAGGAGCTGTAAAAATGAGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTAGAGAAACAGTAAATAATCACTTCAGGAGCTGTAAAAATGAGG  442

seq1  ACTGTGGCAATAAATGATTTTACGACCTTTCCTGCCACAAAGTATGTGGT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGCAATAAATGATTTTACGACCTTTCCTGCCACAAAGTATGTGGT  492

seq1  CATGATCATCAGAGTAGCTTCCATTTAGCAGTTTCTCCTGACAAGCTAGA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGATCATCAGAGTAGCTTCCATTTAGCAGTTTCTCCTGACAAGCTAGA  542

seq1  AATGGTGGACAGAGCTCCATGGTCAGGGGTCACTGCTGTGCCCCTCACTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGTGGACAGAGCTCCATGGTCAGGGGTCACTGCTGTGCCCCTCACTC  592

seq1  TGAAGATGGGGTTTATTAGACCCTTCTGTAATGGAGAACATGTGGGCTTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATGGGGTTTATTAGACCCTTCTGTAATGGAGAACATGTGGGCTTA  642

seq1  GGTTTAGTGACTGCCTCAAAGTCACTTCTAACTAAGTAGCAGTCTGAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTAGTGACTGCCTCAAAGTCACTTCTAACTAAGTAGCAGTCTGAATT  692

seq1  TGAACCCATGTCTTCCCCAATTGCAATATGTCAGTTGCCACGATTCTTTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCATGTCTTCCCCAATTGCAATATGTCAGTTGCCACGATTCTTTA  742

seq1  AGGAGGCACCATAGCTTTCATTGATATCCACACAATCTGCAAGTCGGAAA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGCACCATAGCTTTCATTGATATCCACACAATCTGCAAGTCGGAAA  792

seq1  TGTTGCTCTTGTTTCCCCTGGGCAGCTACTATCATGGGTACCAACATCAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCTTGTTTCCCCTGGGCAGCTACTATCATGGGTACCAACATCAG  842

seq1  CTATTCACCATTCTAGGGGGCCCTGCCATTTCCCTGCTTTCTGACTCCCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCACCATTCTAGGGGGCCCTGCCATTTCCCTGCTTTCTGACTCCCC  892

seq1  AAAATGAATAAAGGCACTCTGGTCAAATTAGAGAAGAGTGGGTTTCTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATAAAGGCACTCTGGTCAAATTAGAGAAGAGTGGGTTTCTTTT  942

seq1  CTGGTGGTGGAGTCACAAGTACAAAGTCACAGAAGTGTGAACACATGCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGTGGAGTCACAAGTACAAAGTCACAGAAGTGTGAACACATGCTG  992

seq1  TGTTTGCAGAGCCGTAAGAGGACAGGCATGGCTGCTGTGTGGACCGCAGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGCAGAGCCGTAAGAGGACAGGCATGGCTGCTGTGTGGACCGCAGG  1042

seq1  GGAATGAAGGATGAGAATTC  1069
      ||||||||||||||||||||
seq2  GGAATGAAGGATGAGAATTC  1062