BAC Information

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BAC

Clone NameB6Ng01-253N05
Chromosome7 (Build37)
Map Location 126,252,147 - 126,252,955
singlet/doubletsinglet
Overlap genenone
Upstream geneRps15a, Arl6ip1, 2610207I05Rik, LOC100043339, Syt17, LOC100042845, E030018N11Rik, Coq7, Tmc7, B230311B06Rik, Tmc5, Mir16, 6330503K22Rik, 9030624J02Rik, 2310008H09Rik, Iqck, Gprc5b
Downstream geneGpr139, LOC100042871, Gp2, Umod, 1700007B13Rik, C730027J19Rik, Acsm2, Acsm1, BC048390, Thumpd1, EG434233, Acsm3, Exod1, 2610020H08Rik, Dcun1d3, LOC100043399, LOC100043396, Lyrm1, Dnahc3, Tmem159
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253N05.bB6Ng01-253N05.g
ACCGA060452GA060453
length511810
definitionB6Ng01-253N05.b B6Ng01-253N05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
atagagacaaataatgggaaaaacgcaactagggatagcaaagaggtaaa
aattagaaatgatcaggtccagacagagttcctgtttaaaataaggaaaa
gttttctaagtggatagtagtgactgtgatggttagttagttagttagtt
agttagttagtttgtttgtttgtttgtttgttttgtttgtttgtcaactt
gacaagccagggttgtctgagaagagggaacctcaattaagatcatgccc
catcagcatgacctgtaggcaaatctgtggggcattttctagctcaatgt
ctgatgtaggaggggcagcctactttggatagggccacctcttgggcaag
tagccaagggttgtataagaaagcagtcttgagcaagtaatggggagcaa
gcccgtaagcagctttcttctaccgttcctgcctctgttctcacttgagt
tcctgccctgactttcctcagtggtgcacagtgttggagacacagaagcc
aaatcaacctt
gaattcactgtacttctctctcaggtaagagaaggggagaagagatattt
gagtctgactttatgccagggaccagtgcactacagcctttgggtgtctg
tacattagacagtttttctaacacacagctctactcatctgtttcctgat
tgccatgtctgcttttgaactgttaaggtagagtgagtatggacaccctg
tggcttggacactaatttttttgctagacttttacaagaaaaattgatga
cccctgctttctccctctcttatttaattagattccctcttatttaatta
aaaataagatgtattaaataaaagcccaagtgccaagagtgagccacctc
cttttgagttattggtcatggaggcccctaagtcacccctaaacaaatca
ggacatttacactgctgttagttgtctacctgaattagacagaagtcagt
tactgaagatgccacacaccttgttcatgggacagagaaatcaaggtgga
agtgtgctgaaggccttctccctgttggctgcccctatgggttatgaggt
tctatgcataacctgagggagaattgttatctacagtcacacacagctgt
gggccctctgtgtaagtgactttccaggcatatagcacaatagtggtaag
tctgtaatggggtaagcagccactctctgactgcatttggtgatcatttt
atatgagacaattcacacactgtgttgttaacttggtcaaacacctgtgg
ctagggaggccataggccctagtgtggaaaggtattgctttcatcctgct
aaatgggcaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_126252147_126252955
seq2: B6Ng01-253N05.g_68_877

seq1  GAATTCACTGTACTTCTCTCTCAGGTAAGAGAAGGGGAGAAGAGATATTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGTACTTCTCTCTCAGGTAAGAGAAGGGGAGAAGAGATATTT  50

seq1  GAGTCTGACTTTATGCCAGGGACCAGTGCACTACAGCCTTTGGGTGTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCTGACTTTATGCCAGGGACCAGTGCACTACAGCCTTTGGGTGTCTG  100

seq1  TACATTAGACAGTTTTTCTAACACACAGCTCTACTCATCTGTTTCCTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTAGACAGTTTTTCTAACACACAGCTCTACTCATCTGTTTCCTGAT  150

seq1  TGCCATGTCTGCTTTTGAACTGTTAAGGTAGAGTGAGTATGGACACCCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCATGTCTGCTTTTGAACTGTTAAGGTAGAGTGAGTATGGACACCCTG  200

seq1  TGGCTTGGACACTAATTTTTTTGCTAGACTTTTACAAGAAAAATTGATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGGACACTAATTTTTTTGCTAGACTTTTACAAGAAAAATTGATGA  250

seq1  CCCCTGCTTTCTCCCTCTCTTATTTAATTAGATTCCCTCTTATTTAATTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTGCTTTCTCCCTCTCTTATTTAATTAGATTCCCTCTTATTTAATTA  300

seq1  AAAATAAGATGTATTAAATAAAAGCCCAAGTGCCAAGAGTGAGCCACCTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGATGTATTAAATAAAAGCCCAAGTGCCAAGAGTGAGCCACCTC  350

seq1  CTTTTGAGTTATTGGTCATGGAGGCCCCTAAGTCACCCCTAAACAAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGAGTTATTGGTCATGGAGGCCCCTAAGTCACCCCTAAACAAATCA  400

seq1  GGACATTTACACTGCTGTTAGTTGTCTACCTGAATTAGACAGAAGTCAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTTACACTGCTGTTAGTTGTCTACCTGAATTAGACAGAAGTCAGT  450

seq1  TACTGAAGATGCCACACACCTTGTTCATGGGACAGAGAAATCAAGGTGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAGATGCCACACACCTTGTTCATGGGACAGAGAAATCAAGGTGGA  500

seq1  AGTGTGCTGAAGGCCTTCTCCCTGTTGGCTGCCCCTATGGGTTATGAGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGCTGAAGGCCTTCTCCCTGTTGGCTGCCCCTATGGGTTATGAGGT  550

seq1  TCTATGCATAACCTGAGGGAGAATTGTTATCTACAGTCACACACAGCTGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGCATAACCTGAGGGAGAATTGTTATCTACAGTCACACACAGCTGT  600

seq1  GGGCCCTCTGTGTAAGTGACTTTCCAGGCATATAGCACAATAGTGGTAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCCTCTGTGTAAGTGACTTTCCAGGCATATAGCACAATAGTGGTAAG  650

seq1  TCTGTAATGGGGTAAGCAGCCACTCTCTGACTGCATTTGGTGATCATTTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAATGGGGTAAGCAGCCACTCTCTGACTGCATTTGGTGATCATTTT  700

seq1  ATATGAGACAATTCACACACTGTGTTGTTAACTTGGTCAAACACCTGTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAGACAATTCACACACTGTGTTGTTAACTTGGTCAAACACCTGTGG  750

seq1  CTAGGGAGGCCATAGGCCCTAGTGTGG-AAGGTATTGCTTTCATCCTGCT  799
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  CTAGGGAGGCCATAGGCCCTAGTGTGGAAAGGTATTGCTTTCATCCTGCT  800

seq1  AAATGGGCAA  809
      ||||||||||
seq2  AAATGGGCAA  810