BAC Information

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BAC

Clone NameB6Ng01-256E16
Chromosome7 (Build37)
Map Location 120,700,283 - 120,701,030
singlet/doubletsinglet
Overlap geneMlstd2
Upstream geneParva, LOC627808, Tead1, 4632411J06Rik, LOC434227, Arntl, A630005I04Rik, Btbd10, Pth, LOC100042736
Downstream geneEG434228, Spon1, Rras2, LOC668451, Copb1, Psma1, 4933406I18Rik, Pde3b, Cyp2r1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-256E16.bB6Ng01-256E16.g
ACCGA062288GA062289
length1,172748
definitionB6Ng01-256E16.b B6Ng01-256E16.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttattcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcgattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcaattccc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttaactcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctggatcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagtttttatcacaattgc
tctgtagtaaagctttaggtctggcatggtgattccgccagaagttcttt
tatccttgagaagactttttgctatcctaggttttttgttattccagaca
aatttgcaaattgctccttccaattcgttgaagaattgagttggaatttt
gatggggattgcattgaatctgtagattgcttttggcaagatagccattt
ttacaatgttgatcctgccaatccatgagcatgggagatctttccatctt
ctgagatcttctttaatttctttcttcagagatttgaagtttttatcata
cagatctttcacctcctttagttagagtcacgccaagatattttatatta
tttgtgactattgagaaggtgttgttccctaatttcttctcagcctgtta
ttctttgtatagaagaaaggcattgacttgttgagtttattttatatcag
ctactcacgaggctgtttatcagttaggagttctctggtagattttaagg
tcactttaaatattaactatcattcatctcgcaaaagtgtgatactttgg
gaacttccctcgtttccaagtg
gaattcagaaattttaggttgtatcacatcaattatttaataaataaaaa
caaaaggggaaaagatagtttctgagcataaatcaaattcagggtagaga
taaaagatagagatataagattctttaagactacattgtggtacctttca
gacagaaagacaaaaacaaataaacaaaacaaatgagaaaaacttcttca
gagtgtaaagacacgtatcacattttctactgttggatgacaggctttaa
ggagaaaatatttaatatctataggtactgctccacagcatcctgatgag
acctaaaggcttgtctcaaagagatttgtgaataggctctgatctatctg
atctgagtccatctcttcggattatctttagaatactcagtggaaacttt
ttaaaagccacacgaatttaaataagaagggaaagtataccaataaaaat
gtctctgtaacataagtcagcaaacaaaagcccacacagccagtacactc
tattactatcttgtgaataaagttttattaaagcaatcatgttcattatt
tataaactgtctatgactgctttctttctttaacaccaaggcagagaggt
aacaacagaactatgcgcttacaaggtctaaatgtttacaacatggccct
ttataagaaaggttttctgacccttttcctggaatctaactttttatggg
caggaagtagaattagtaatctgttcagtcttacgggggggggggggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_120700283_120701030
seq2: B6Ng01-256E16.g_65_812 (reverse)

seq1  CCCCCCCCCCCCCCGTAAGACTGAACAGATTACTAATTCTACTTCCTGCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCCCCCCCCCCCGTAAGACTGAACAGATTACTAATTCTACTTCCTGCC  50

seq1  CATAAAAAGTTAGATTCCAGGAAAAGGGTCAGAAAACCTTTCTTATAAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAAAAGTTAGATTCCAGGAAAAGGGTCAGAAAACCTTTCTTATAAAG  100

seq1  GGCCATGTTGTAAACATTTAGACCTTGTAAGCGCATAGTTCTGTTGTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATGTTGTAAACATTTAGACCTTGTAAGCGCATAGTTCTGTTGTTAC  150

seq1  CTCTCTGCCTTGGTGTTAAAGAAAGAAAGCAGTCATAGACAGTTTATAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCCTTGGTGTTAAAGAAAGAAAGCAGTCATAGACAGTTTATAAA  200

seq1  TAATGAACATGATTGCTTTAATAAAACTTTATTCACAAGATAGTAATAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGAACATGATTGCTTTAATAAAACTTTATTCACAAGATAGTAATAGA  250

seq1  GTGTACTGGCTGTGTGGGCTTTTGTTTGCTGACTTATGTTACAGAGACAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTACTGGCTGTGTGGGCTTTTGTTTGCTGACTTATGTTACAGAGACAT  300

seq1  TTTTATTGGTATACTTTCCCTTCTTATTTAAATTCGTGTGGCTTTTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATTGGTATACTTTCCCTTCTTATTTAAATTCGTGTGGCTTTTAAAA  350

seq1  AGTTTCCACTGAGTATTCTAAAGATAATCCGAAGAGATGGACTCAGATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCACTGAGTATTCTAAAGATAATCCGAAGAGATGGACTCAGATCA  400

seq1  GATAGATCAGAGCCTATTCACAAATCTCTTTGAGACAAGCCTTTAGGTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATCAGAGCCTATTCACAAATCTCTTTGAGACAAGCCTTTAGGTCT  450

seq1  CATCAGGATGCTGTGGAGCAGTACCTATAGATATTAAATATTTTCTCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGGATGCTGTGGAGCAGTACCTATAGATATTAAATATTTTCTCCTT  500

seq1  AAAGCCTGTCATCCAACAGTAGAAAATGTGATACGTGTCTTTACACTCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCTGTCATCCAACAGTAGAAAATGTGATACGTGTCTTTACACTCTG  550

seq1  AAGAAGTTTTTCTCATTTGTTTTGTTTATTTGTTTTTGTCTTTCTGTCTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTTTTTCTCATTTGTTTTGTTTATTTGTTTTTGTCTTTCTGTCTG  600

seq1  AAAGGTACCACAATGTAGTCTTAAAGAATCTTATATCTCTATCTTTTATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTACCACAATGTAGTCTTAAAGAATCTTATATCTCTATCTTTTATC  650

seq1  TCTACCCTGAATTTGATTTATGCTCAGAAACTATCTTTTCCCCTTTTGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCCTGAATTTGATTTATGCTCAGAAACTATCTTTTCCCCTTTTGTT  700

seq1  TTTATTTATTAAATAATTGATGTGATACAACCTAAAATTTCTGAATTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTATTAAATAATTGATGTGATACAACCTAAAATTTCTGAATTC  748