BAC Information

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BAC

Clone NameB6Ng01-257G01
Chromosome7 (Build37)
Map Location 133,969,364 - 134,154,922
singlet/doubletdoublet
Overlap gene1500016O10Rik, 4930451I11Rik, Doc2a, Ccdc95, Hirip3, 1110032O16Rik, Kctd13, A830007L07Rik, Sez6l2, D830044I16Rik, Cdipt, Mvp
Upstream geneD430042O09Rik, Gsg1l, Xpo6, Sbk1, LOC100043495, Lat, 2210013K02Rik, Nfatc2ip, Cd19, Rabep2, Atp2a1, Sh2b1, Tufm, Atxn2l, Eif3s8, Cln3, Apob48r, Il27, Nupr1, Ccdc101, Sult1a1, LOC629029, Giyd2, Bola2, Coro1a, Snrp1c-ps1, LOC100043044, Mapk3, Gdpd3, Ypel3, Tbx6, Ppp4c, Aldoa
Downstream gene2900092E17Rik, Maz, Kif22, 1810010M01Rik, AI467606, Qprt, Spn, Cd2bp2, Tbc1d10b, Mylpf, Sept1, LOC100043580, Zfp553, Zfp771, 2410015N17Rik, Sephs2, Itgal, Zfp768, LOC100043097, LOC100043589, 6430604K15Rik, 9130019O22Rik, E430018J23Rik, LOC100043590, Zfp764, Zfp688, Zfp689, Prr14, Fbs1, 1700008J07Rik, LOC100043597, D030022P06Rik, Phkg2, Gm166, Rnf40, 1700120K04Rik, Zfp629, Bcl7c, Ctf1, Ctf2, Fbxl19, Tmem142c, Setd1a, Hsd3b7, Stx1b2, Stx4a, Zfp668, Zfp646, BC039632, Vkorc1, Bckdk, Myst1, Prss8, Prss36, Fus, Pycard, Trim72
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257G01.bB6Ng01-257G01.g
ACCGA063094GA063095
length1,0571,104
definitionB6Ng01-257G01.b B6Ng01-257G01.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(134,153,865 - 134,154,922)(133,969,364 - 133,970,448)
sequence
gaattcacagctaccctggacccacctgagaaagaagaaaaggtcttggt
ctttgccctccagatgtaaacagatttgttgagcttggactgtttgagat
ggaccttcccctccctaaacctgtagctttaggacagacacctttgcaac
tttttcagtccagcagaggaagtttggttgctaggagtgattcagagcca
aggttgcaataacagaactgtgacaaggctaatgtttctggttgttgagg
tttggttttgtttttgaggcagggtttccctgtacagccctggcaatccc
gaaactctagaccaggctggccttaaatttggagatttacctggctctgt
agccttagctagctgaaaacttgctctgtatctcagtccttcatgttgta
gttttcttcctacttcctaagtgctaggattataagcataaaccactaga
ctcagctcactcacacacaccagcatcgctctgggtaacccaggctagcc
tgggctagtgctgtcaccatcacctccagatggcttatagctggtctttg
ctgctttgtgggttcttttccccaccctttatcctcccctccaccccatt
tcaccccctaccactagataagagaaaaggagagaggagagagatccctg
aattgaacttttgtttcttttatgagcatgactactaacaaaccaaaacc
aaccaaatgaagccaacaaccacccacgcttgttggggtgctagcattta
tgtaccctctgaaaagttcccagaattccaaatgtcacacagttgcagaa
actatctgcagctggtaaaaccatgcctctgctagagcacgaggcaaatc
atagtcagctgctgtggacggtccgatgcagcccacaccccacacctggg
attaaacaaaagtgctttcttaaatatttctgtatttttaaagaaaccac
aattccagaatcctcactacagtgctctcaatctttgagtcattggtgag
aactttttaaaaaattaatcagtgctcagaccctaccctctatggaagaa
aacccca
gaattctctcctcctaggacttatagtgagatcacactcctccccagaac
agctctgcagggaggagctgagtgtgttaagtgcctagaacaattcttgg
ctccatcgtattgaggctcacctcttaggatcctttgccatgtgacttcc
ccttgctctctcccaaccacttccccagctaaagggtcccagagaagctt
ggtgccggacacctccttctcacctattcttagctagaggtcaccttttg
gctcttgcattcccaacctcaagtccgttcttggccttgttccaccttta
atccttaggtaggtgggaggatcagggttaatccaggggcaacagctgtc
cttccttctgagcacctaactgctgagagagcaggcatggaatctaaccc
ctcacttgtcaaccaagggctgagtcccttctagttcttcacatcccaga
gtcctatggcttccatccctcaacgcatccctaggcacgctctgagcctt
ccctgagcacggttgggtcctgtctgtatttctgctgtctctagctagct
gcttcttccctgccacctgactctggctcctggtcacatccctctacaac
actgcagtatgggtccctttgagagagggctgtcccctgctccaggtcag
cccacctgagtaagccactgctggctctgttctcaccacaccctctcacc
agcattcacttggtgtatggtggctagctggatagctctttgctctgttc
cctctgggcctttctgtctcccatccccacccaggcctgactgaggattc
ctggacttgagaaagcttcttgtgctgactcaagagaaaaaaaaaaaaaa
gcgcagagttgcggtatctggtgtgcttcccggtatttgttttactccaa
attctgttagaaactctctctgttctttgggcatcttggctccggcagtt
ttcttctttactgctgggccatacctgaacttaacatagacttgccacct
tgggagcaaaggcaggctgcactgaacagcccctctggttgctctgggga
cggcttcaactctcttgaaccttcctcgagaacagtgggccgagccaggg
actc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_134153865_134154922
seq2: B6Ng01-257G01.b_46_1102 (reverse)

seq1  TGGGG-TTTCTTTCATAGAGGGTAGGGTCTGAGCACTGATTAATTTTTTA  49
      ||||| |||||| |||||||||||||||||||||||||||||||||||||
seq2  TGGGGTTTTCTTCCATAGAGGGTAGGGTCTGAGCACTGATTAATTTTTTA  50

seq1  AAAAGTTCTCA-CAATGACTCAAAGATTGAGAGCCACTGTAGTGAGAATT  98
      ||||||||||| ||||||||||||||||||||| |||||||||||| |||
seq2  AAAAGTTCTCACCAATGACTCAAAGATTGAGAG-CACTGTAGTGAGGATT  99

seq1  CTGGAATTGTGGTTTCTTTAAAAATACAGAAATATTTTAAGAAAGCACTT  148
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  CTGGAATTGTGGTTTCTTTAAAAATACAGAAATA-TTTAAGAAAGCACTT  148

seq1  TTGTTTTAATCCCAGGTGTGGGGTGTGGGCTGCATCGGACCGTCCACAGC  198
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTG-TTTAATCCCAGGTGTGGGGTGTGGGCTGCATCGGACCGTCCACAGC  197

seq1  AGCTGACTATGATTTGCCTCGTGCTCTAGCAGAGGCATGGTTTTACCAGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACTATGATTTGCCTCGTGCTCTAGCAGAGGCATGGTTTTACCAGC  247

seq1  TGCAGATAGTTTCTGCAACTGTGTGACATTTGGAATTCTGGGAACTTTTC  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGATAGTTTCTGCAACTGTGTGACATTTGGAATTCTGGGAACTTTTC  297

seq1  AGAGGGTACATAAATGCTAGCACCCCAACAAGCGTGGGTGGTTGTTGGCT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGTACATAAATGCTAGCACCCCAACAAGCGTGGGTGGTTGTTGGCT  347

seq1  TCATTTGGTTGGTTTTGGTTTGTTAGTAGTCATGCTCATAAAAGAAACAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTGGTTGGTTTTGGTTTGTTAGTAGTCATGCTCATAAAAGAAACAA  397

seq1  AAGTTCAATTCAGGGATCTCTCTCCTCTCTCCTTTTCTCTTATCTAGTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCAATTCAGGGATCTCTCTCCTCTCTCCTTTTCTCTTATCTAGTGG  447

seq1  TAGGGGGTGAAATGGGGTGGAGGGGAGGATAAAGGGTGGGGAAAAGAACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGGGGTGAAATGGGGTGGAGGGGAGGATAAAGGGTGGGGAAAAGAACC  497

seq1  CACAAAGCAGCAAAGACCAGCTATAAGCCATCTGGAGGTGATGGTGACAG  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAAAGCAGCAAAGACCAGCTATAAGCCATCTGGAGGTGATGGTGACAG  547

seq1  CACTAGCCCAGGCTAGCCTGGGTTACCCAGAGCGATGCTGGTGTGTGTGA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGCCCAGGCTAGCCTGGGTTACCCAGAGCGATGCTGGTGTGTGTGA  597

seq1  GTGAGCTGAGTCTAGTGGTTTATGCTTATAATCCTAGCACTTAGGAAGTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCTGAGTCTAGTGGTTTATGCTTATAATCCTAGCACTTAGGAAGTA  647

seq1  GGAAGAAAACTACAACATGAAGGACTGAGATACAGAGCAAGTTTTCAGCT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAAAACTACAACATGAAGGACTGAGATACAGAGCAAGTTTTCAGCT  697

seq1  AGCTAAGGCTACAGAGCCAGGTAAATCTCCAAATTTAAGGCCAGCCTGGT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAAGGCTACAGAGCCAGGTAAATCTCCAAATTTAAGGCCAGCCTGGT  747

seq1  CTAGAGTTTCGGGATTGCCAGGGCTGTACAGGGAAACCCTGCCTCAAAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGAGTTTCGGGATTGCCAGGGCTGTACAGGGAAACCCTGCCTCAAAAA  797

seq1  CAAAACCAAACCTCAACAACCAGAAACATTAGCCTTGTCACAGTTCTGTT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACCAAACCTCAACAACCAGAAACATTAGCCTTGTCACAGTTCTGTT  847

seq1  ATTGCAACCTTGGCTCTGAATCACTCCTAGCAACCAAACTTCCTCTGCTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCAACCTTGGCTCTGAATCACTCCTAGCAACCAAACTTCCTCTGCTG  897

seq1  GACTGAAAAAGTTGCAAAGGTGTCTGTCCTAAAGCTACAGGTTTAGGGAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGAAAAAGTTGCAAAGGTGTCTGTCCTAAAGCTACAGGTTTAGGGAG  947

seq1  GGGAAGGTCCATCTCAAACAGTCCAAGCTCAACAAATCTGTTTACATCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGGTCCATCTCAAACAGTCCAAGCTCAACAAATCTGTTTACATCTG  997

seq1  GAGGGCAAAGACCAAGACCTTTTCTTCTTTCTCAGGTGGGTCCAGGGTAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGCAAAGACCAAGACCTTTTCTTCTTTCTCAGGTGGGTCCAGGGTAG  1047

seq1  CTGTGAATTC  1058
      ||||||||||
seq2  CTGTGAATTC  1057

seq1: chr7_133969364_133970448
seq2: B6Ng01-257G01.g_66_1169

seq1  GAATTCTCTCCTCCTAGGACTTATAGTGAGATCACACTCCTCCCCAGAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCCTCCTAGGACTTATAGTGAGATCACACTCCTCCCCAGAAC  50

seq1  AGCTCTGCAGGGAGGAGCTGAGTGTGTTAAGTGCCTAGAACAATTCTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCTGCAGGGAGGAGCTGAGTGTGTTAAGTGCCTAGAACAATTCTTGG  100

seq1  CTCCATCGTATTGAGGCTCACCTCTTAGGATCCTTTGCCATGTGACTTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATCGTATTGAGGCTCACCTCTTAGGATCCTTTGCCATGTGACTTCC  150

seq1  CCTTGCTCTCTCCCAACCACTTCCCCAGCTAAAGGGTCCCAGAGAAGCTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCTCTCTCCCAACCACTTCCCCAGCTAAAGGGTCCCAGAGAAGCTT  200

seq1  GGTGCCGGACACCTCCTTCTCACCTATTCTTAGCTAGAGGTCACCTTTTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCCGGACACCTCCTTCTCACCTATTCTTAGCTAGAGGTCACCTTTTG  250

seq1  GCTCTTGCATTCCCAACCTCAAGTCCGTTCTTGGCCTTGTTCCACCTTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTGCATTCCCAACCTCAAGTCCGTTCTTGGCCTTGTTCCACCTTTA  300

seq1  ATCCTTAGGTAGGTGGGAGGATCAGGGTTAATCCAGGGGCAACAGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTAGGTAGGTGGGAGGATCAGGGTTAATCCAGGGGCAACAGCTGTC  350

seq1  CTTCCTTCTGAGCACCTAACTGCTGAGAGAGCAGGCATGGAATCTAACCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTCTGAGCACCTAACTGCTGAGAGAGCAGGCATGGAATCTAACCC  400

seq1  CTCACTTGTCAACCAAGGGCTGAGTCCCTTCTAGTTCTTCACATCCCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTTGTCAACCAAGGGCTGAGTCCCTTCTAGTTCTTCACATCCCAGA  450

seq1  GTCCTATGGCTTCCATCCCTCAACGCATCCCTAGGCACGCTCTGAGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTATGGCTTCCATCCCTCAACGCATCCCTAGGCACGCTCTGAGCCTT  500

seq1  CCCTGAGCACGGTTGGGTCCTGTCTGTATTTCTGCTGTCTCTAGCTAGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGAGCACGGTTGGGTCCTGTCTGTATTTCTGCTGTCTCTAGCTAGCT  550

seq1  GCTTCTTCCCTGCCACCTGACTCTGGCTCCTGGTCACATCCCTCTACAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCTTCCCTGCCACCTGACTCTGGCTCCTGGTCACATCCCTCTACAAC  600

seq1  ACTGCAGTATGGGTCCCTTTGAGAGAGGGCTGTCCCCTGCTCCAGGTCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCAGTATGGGTCCCTTTGAGAGAGGGCTGTCCCCTGCTCCAGGTCAG  650

seq1  CCCACCTGAGTAAGCCACTGCTGGCTCTGTTCTCACCACACCCTCTCACC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCTGAGTAAGCCACTGCTGGCTCTGTTCTCACCACACCCTCTCACC  700

seq1  AGCATTCACTTGGTGTATGGTGGCTAGCTGGATAGCTCTTTGCTCTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATTCACTTGGTGTATGGTGGCTAGCTGGATAGCTCTTTGCTCTGTTC  750

seq1  CCTCTGGGCCTTTCTGTCTCCCATCCCCACCCCAGGCCTGACTGAGGATT  800
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CCTCTGGGCCTTTCTGTCTCCCATCCCCA-CCCAGGCCTGACTGAGGATT  799

seq1  CCTGGACTTGAGAAAGCTTC-TGTGCTGACTCAAGAG-AAAAAAAAAAAA  848
      |||||||||||||||||||| |||||||||||||||| ||||||||||||
seq2  CCTGGACTTGAGAAAGCTTCTTGTGCTGACTCAAGAGAAAAAAAAAAAAA  849

seq1  AGCGCAGAGTTGC-GTATCT-GTGTGCTTCCC-GTATTTG-TTTACTCCA  894
      ||||||||||||| |||||| ||||||||||| ||||||| |||||||||
seq2  AGCGCAGAGTTGCGGTATCTGGTGTGCTTCCCGGTATTTGTTTTACTCCA  899

seq1  AAGTCTG-TAG-AACTCTCTCTGTTCTT--GGCATCTTTGCT-CGGCAGT  939
      || |||| ||| ||||||||||||||||  |||||||| ||| |||||||
seq2  AATTCTGTTAGAAACTCTCTCTGTTCTTTGGGCATCTTGGCTCCGGCAGT  949

seq1  TT--CTCTTTACTGCT-GGCCATACCTGAACTAACAATAGACTTGCCACC  986
      ||   ||||||||||| ||||||||||||||| |  ||||||||||||||
seq2  TTTCTTCTTTACTGCTGGGCCATACCTGAACTTAACATAGACTTGCCACC  999

seq1  TT-GGAGCAAAGGCAGGCTGCACTG-ACAGCCCCTCTGG-TGCCCTGGGG  1033
      || |||||||||||||||||||||| ||||||||||||| ||| ||||||
seq2  TTGGGAGCAAAGGCAGGCTGCACTGAACAGCCCCTCTGGTTGCTCTGGGG  1049

seq1  ACCGGCTCCAACTCTCT--GACCTT-CTCGAG-ACAGTGGGGCCGAG-CA  1078
      | ||||| |||||||||   ||||| |||||| ||||| |||||||| ||
seq2  A-CGGCTTCAACTCTCTTGAACCTTCCTCGAGAACAGT-GGGCCGAGCCA  1097

seq1  AGGACTC  1085
       ||||||
seq2  GGGACTC  1104