BAC Information

Click to search

BAC

Clone NameB6Ng01-257M07
Chromosome7 (Build37)
Map Location 124,341,517 - 124,342,597
singlet/doubletsinglet
Overlap genenone
Upstream geneRps13, Pik3c2a, LOC100042798, Nucb2, LOC100043320, EG668484, LOC668485, LOC546993, LOC100043330
Downstream geneXylt1, LOC669758, Rps15a, Arl6ip1, 2610207I05Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257M07.bB6Ng01-257M07.g
ACCGA063381GA063382
length1,2471,078
definitionB6Ng01-257M07.b B6Ng01-257M07.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctggtgcttaaatcacagatcttcatgtttgcaaggctttactgg
ttaagccatctctgcagcccttttccaaacacttaacaatgctgtggatg
agaaacctacaatggtaccaggaggtgtggcagatggcactcacctagga
gaaagatgttcttgcctactcggaaggtcaattcctgcttcttggggaag
cccagagtgagatgaaaggtggaaatctcatcatagatcttattatagtt
cttctaagcttacagcctcactggattcctattgcctttagaaaaagtcc
aatatatgtaatacagactcaaggttccgtgagcaactttcaactgctgc
agcaagaagaggaggctatagggaaggatggaagatgacattccaaaaga
atcttttactgttgtgcttaaggactatggaagaatggcaaaggaaccca
tatttgcacccaagctgggttattacacatgggtttccgcagtagtcagg
gttctctaaggagcataactaataaaaggagtgtgtgttagactgggatt
cattagattggcttacaggatactttactattggagtaatccaacaatgg
ctgtgacacagtgaaaggctgtgaatcagggcactgctgagtccatgagg
ctggagcctcagcagtcccaatctggagctgaagaactggatgattcctg
gagagtggctggtttccagtccgtatggaaagcctggagaagatggccat
aatatcagggacagggataacagcaccaacagggttgatgcgctttccag
agagagtgagcaggaatggaaaatgactccatcatggcctttaatctgag
ctgtcagaaagtgctgcccataccggtgggtcttcctagttcaactgagg
caatcaagatgaccactcagacacacccacaagcccagtgaagacatgcc
tgactgagagtttatttccaagtgactcgggattgtgttaaggtgacaac
taacttagatatgggttatttgtggctgtgagaaaacacctgtgacaaag
caacttggggaaggaaggttatttattatcacaggttccattttaacact
tcattctcaatgcagttgaggccagggacctcaatcaatggatgtacctt
gcagtacgagggctgtatgtcaaggccataaggttgcgtttactgcctag
tcatacattgatctgcctccagtctctgctttttccatatagtgaaa
gaattctagtattggagtcagctcccacaaggtggagtccacaggctgac
ttgtgtaagattttaatctcctttcctacctggccagatctgcttacaca
atgacagcattcttcattaaaagacaagtgtctgctttcttagcagtcag
acgttcaagggccctctgcttttataggaccgtggaggctagtgaggtga
gctggttctggagcaatcatagaactgaagctgattcctggatagtgtct
gtcagctgagtggaaatctactgagccagatacagaccagggacagaagg
ggaagttaaggagcttaggtagatcattatctttagatataacagcagga
ccactgtgtataatctagactgaaacactcattgtagaagcagttaaaag
tctgtaaacagcttgagcaaatgcacatcttttagccagagctcaaaagt
aaagggtgaaaagttatcaatgtgatagaggcgtgaacactcatctgtaa
taagacagaaatttcctggcaggaagtagagaacacagaagaagagattg
aggatccaaaagatggttttgggataaaagcatgaacgtcctttactctt
gggcagaggactggatcgaaataaactggacagagattttcccagcacag
tgagaatgtttaaagtctatatttagaaaataaaacaaccaaaaggaatt
tgaatattttgagcttgtgactatattgtcagtctaactattattatttt
ttttaatacttaagtacttcctggatgaccttgaatcagaggctggatag
cccaaagacttaggatagaaaaaagtatcaatacgttgtttcctaatgat
attctgctatactcattgggtaggtgcttagcccaatcatcattagagac
ttccctttggcagctgatgggagcagatgcagagacccacagccaaacat
taggtggagaaagagtccaagttggagatctccattggtgcctcccctcg
gagcttggggaacactgtgaaagaggaggagaaaattataggagcagagt
gtcaatgacacagaagatctacttaaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_124341517_124342597
seq2: B6Ng01-257M07.g_67_1144

seq1  GAATTCTAGTATTGGAGTCAGCTCCCACAAGGTGGAGTCCACAGGCTGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTAGTATTGGAGTCAGCTCCCACAAGGTGGAGTCCACAGGCTGAC  50

seq1  TTGTGTAAGATTTTAATCTCCTTTCCTACCTGGCCAGATCTGCTTACACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGTAAGATTTTAATCTCCTTTCCTACCTGGCCAGATCTGCTTACACA  100

seq1  ATGACAGCATTCTTCATTAAAAGACAAGTGTCTGCTTTCTTAGCAGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGACAGCATTCTTCATTAAAAGACAAGTGTCTGCTTTCTTAGCAGTCAG  150

seq1  ACGTTCAAGGGCCCTCTGCTTTTATAGGACCGTGGAGGCTAGTGAGGTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTCAAGGGCCCTCTGCTTTTATAGGACCGTGGAGGCTAGTGAGGTGA  200

seq1  GCTGGTTCTGGAGCAATCATAGAACTGAAGCTGATTCCTGGATAGTGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTTCTGGAGCAATCATAGAACTGAAGCTGATTCCTGGATAGTGTCT  250

seq1  GTCAGCTGAGTGGAAATCTACTGAGCCAGATACAGACCAGGGACAGAAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGCTGAGTGGAAATCTACTGAGCCAGATACAGACCAGGGACAGAAGG  300

seq1  GGAAGTTAAGGAGCTTAGGTAGATCATTATCTTTAGATATAACAGCAGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGTTAAGGAGCTTAGGTAGATCATTATCTTTAGATATAACAGCAGGA  350

seq1  CCACTGTGTATAATCTAGACTGAAACACTCATTGTAGAAGCAGTTAAAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTGTGTATAATCTAGACTGAAACACTCATTGTAGAAGCAGTTAAAAG  400

seq1  TCTGTAAACAGCTTGAGCAAATGCACATCTTTTAGCCAGAGCTCAAAAGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTAAACAGCTTGAGCAAATGCACATCTTTTAGCCAGAGCTCAAAAGT  450

seq1  AAAGGGTGAAAAGTTATCAATGTGATAGAGGCGTGAACACTCATCTGTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTGAAAAGTTATCAATGTGATAGAGGCGTGAACACTCATCTGTAA  500

seq1  TAAGACAGAAATTTCCTGGCAGGAAGTAGAGAACACAGAAGAAGAGATTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACAGAAATTTCCTGGCAGGAAGTAGAGAACACAGAAGAAGAGATTG  550

seq1  AGGATCCAAAAGATGGTTTTGGGATAAAAGCATGAACGTCCTTTACTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGATCCAAAAGATGGTTTTGGGATAAAAGCATGAACGTCCTTTACTCTT  600

seq1  GGGCAGAGGACTGGATCGAAATAAACTGGACAGAGATTTTCCCAGCACAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGGACTGGATCGAAATAAACTGGACAGAGATTTTCCCAGCACAG  650

seq1  TGAGAATGTTTAAAGTCTATATTTAGAAAATAAAACAACCAAAAGGAATT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGAATGTTTAAAGTCTATATTTAGAAAATAAAACAACCAAAAGGAATT  700

seq1  TGAATATTTTGAGCTTGTGACTATATTGTCAGTCTAACTATTATTATTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTTTGAGCTTGTGACTATATTGTCAGTCTAACTATTATTATTTT  750

seq1  TTTTAATACTTAAGTACTTCCTGGATGACCTTGAATCAGAGGCTGGATAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAATACTTAAGTACTTCCTGGATGACCTTGAATCAGAGGCTGGATAG  800

seq1  CCCAAAGACTTAGGATAGAAAAAAGTATCAATACGTTGTTTCCTAATGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAAAGACTTAGGATAGAAAAAAGTATCAATACGTTGTTTCCTAATGAT  850

seq1  ATTCTGCTATACTCATT-GGTAGGTGCTTAGCCCAATCATCATTAGAGAC  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATTCTGCTATACTCATTGGGTAGGTGCTTAGCCCAATCATCATTAGAGAC  900

seq1  TT-CCTTTGGCAGCTGATGGGAGCAGATGCAGAGACCCACAGCCAAACAT  948
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTTTGGCAGCTGATGGGAGCAGATGCAGAGACCCACAGCCAAACAT  950

seq1  TAGGTGGAGAAAGAGTCCAAGTTGGAGATCTCCATTGGGTGCCTCCCCTC  998
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAGGTGGAGAAAGAGTCCAAGTTGGAGATCTCCATT-GGTGCCTCCCCTC  999

seq1  GGAGCTTGGGGAACACTGTGAAAGAGGGAGGAGAAAAATTATAGGAGCCA  1048
      ||||||||||||||||||||||||| ||||||| ||||||||||||| ||
seq2  GGAGCTTGGGGAACACTGTGAAAGA-GGAGGAG-AAAATTATAGGAG-CA  1046

seq1  GAGTGGTCAATGACACCAGAGATCTACTAAACA  1081
      |||| |||||||||||   ||||||||| ||||
seq2  GAGT-GTCAATGACACAGAAGATCTACTTAACA  1078