BAC Information

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BAC

Clone NameB6Ng01-258C24
Chromosome7 (Build37)
Map Location 59,122,659 - 59,285,172
singlet/doubletdoublet
Overlap geneGas2, 1700015G11Rik, EG668783
Upstream geneEG668766, EG668767, EG668768, EG638046, EG668770, EG668774, LOC668776, LOC434186, LOC546971, LOC668779, Tmem16e, Slc17a6, EG620599, LOC654473, LOC100040608
Downstream geneEG620782, LOC100040692
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258C24.bB6Ng01-258C24.g
ACCGA063689GA063690
length1,2051,101
definitionB6Ng01-258C24.b B6Ng01-258C24.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,283,966 - 59,285,172)(59,122,659 - 59,123,780)
sequence
gaattcaactaaagacaaacgaattgtggttaagtctccacaactctggc
tgctttaccagaggccacacccattctaaggaccccacataagatattgc
ctagctatgagcagctctctgtaggtggggtctttcctccagtcaatatg
gtgacctcacaggctccagaagagaggctgaagaaataaaagtaccgaag
caaaaaaatgtctttgcagtgacaacagatgattgcttctagcctacaac
tctggaagactaggaaagatgagcaggtgctaaagagaagaaatatcgat
ctattctccagtgatgtggtttcttatgtactagtcaaagagaccaactt
cactctggacagcatcattcaaggggtgaatagttcagatacggtcctgt
gttttcctgccacccaggctaccagggaaatgatatctcaggaaaataac
cctcctctaaatttgattattgaagcaggactcattcccaagctggtgga
cttcctgaaggtggcacctctccccaacctgcagttggaggttgcatggg
cactcaccaacattgcctcagggacttcagagcagactcaagctgttgtg
aaaggagcccctgattgaagtcctctgttcccccagacaggatcatgtct
gagcaggctgtgtgggcccttgggaatatcagtggtgactgtgtagaatt
cagagacaatgtcatttccaataatgtcatcccacacctacctgatcaac
ctatttcaaaaaacaaaccaatcacatttcttcagaatatcacatggact
ttgtccaacttatgctgaaacaaaaatctacacccttgtgaggatgctgt
gaggcagatgctatctaccctctgtcagctcctgctgcatcatgataatg
agatcctctcagatacctgctgggccctgtctaccttgttggaagctgac
tcctagcagaaagtggctatcatctctgtagccatcttaggttatttact
tacagttggtacttttccaccctgatgagagacttgatcagacagaactg
tcttgtctcattctcaggtctcttgccttcattccccactctcctccttg
cagaatcattgaactgacccatgtacaggtcatctggtgtccaatgtggg
ccagtgaaaacaagatcctgctgagggacgttacctggaaaaaagggtta
caatc
gaattccatgcagctgtgaagtgccacatggtttttaggagctgaacctg
agccttcttcaagagcacagtggtttgaatccctgaaacatctctccagc
cccaacatttatgttttattgctgctgttctgagagcagaagaccttcac
tagtgagcagcatgcaaatcagcatgctggctgtacctcaatccacttgc
aggtttccctcctccctgcttagtctgaccaatagaaaatgcttcgaaat
tagaacaagacattattgagggcactgcaggctagagaataggaataatt
agtaataagaatattaataaaggcaagtttcctttataatggtaaataat
tggaactattagagagtttaatctgagtaatagtaaagactacaatcaat
tatataattctaagcaaaatcacacttcatgatgaaataatttattaaca
agatattattttcaaaagaaaactatttcttcagatcaaataatattttt
aagttggtcttggttacggaccttctgaaatattgatgaaatatttcacg
gttggggtcaccacaacatgaggaactgtactaaagggttgcagcattag
gaaggttgagaaccactggtctaagtcatattttccagtaaaattgtttt
gagtgttaatcatttagtttgtggttatcttattattaagaacacaaaca
aacaaagtgaaaaaccctccttaggggttatctatcactctgtcttttgg
cattcatgcctcttcaggattggaggtggttataaatgctgatcttggac
tcccatctctctcccataaccaaagccaaagcaaaggttatgcccgtgga
ctgttgaccctttctgtaagtttttcctggtcagagttttctctgatacc
tttttttttttgttttttctgtgagcttttcatgacttcccactggaggc
agtgcactgccattgtgcctgtggtgtttgactgactctgtgagcctgga
gctctcaccccagtgcagtcagactgactcaatagcacatgtcttcttca
atggaattcactcaatacgtgggaagtctatactgaagtaaacatttgga
t
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_59283966_59285172
seq2: B6Ng01-258C24.b_47_1251 (reverse)

seq1  GATTG--ACCC-TTCTTCCA-GTAACGTCCCTCA-CAGGGTCTCTTGTTC  45
      |||||  |||| || ||||| ||||||||||||| ||||   ||||||| 
seq2  GATTGTAACCCTTTTTTCCAGGTAACGTCCCTCAGCAGG--ATCTTGTTT  48

seq1  TCACTGCCCCCACATTTGGCACCAGATGACCTGTACCATGGGTCAG-TCA  94
      ||||||  |||||||| | |||||||||||||||| |||||||||| |||
seq2  TCACTG-GCCCACATTGGACACCAGATGACCTGTA-CATGGGTCAGTTCA  96

seq1  ATGGATTCTGCAAGGGAGAGAGTGGGGATGGAAGGGCAAGAGACTTGAAG  144
      || ||||||||||||  |||||||||||  ||| |||||||||| || ||
seq2  AT-GATTCTGCAAGGAGGAGAGTGGGGAATGAA-GGCAAGAGACCTG-AG  143

seq1  AATGGAGACAAGACAG-TCTGTCTGATCAAGTCTCTCATCAGGGTGGAAA  193
      ||| |||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAT-GAGACAAGACAGTTCTGTCTGATCAAGTCTCTCATCAGGGTGGAAA  192

seq1  AGTACCAACTTGTAAGTAAATAACCTAAGATGGCTACAGAGATGATAGCC  243
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCAAC-TGTAAGTAAATAACCTAAGATGGCTACAGAGATGATAGCC  241

seq1  ACTTTCTGCTAGGAGTCAGCTTCCAACAAGGTAGACAGGGCCCAGCAGGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCTGCTAGGAGTCAGCTTCCAACAAGGTAGACAGGGCCCAGCAGGT  291

seq1  ATCTGAGAGGATCTCATTATCATGATGCAGCAGGAGCTGACAGAGGGTAG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGAGAGGATCTCATTATCATGATGCAGCAGGAGCTGACAGAGGGTAG  341

seq1  ATAGCATCTGCCTCACAGCATCCTCACAAGGGTGTAGATTTTTGTTTCAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCATCTGCCTCACAGCATCCTCACAAGGGTGTAGATTTTTGTTTCAG  391

seq1  CATAAGTTGGACAAAGTCCATGTGATATTCTGAAGAAATGTGATTGGTTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAAGTTGGACAAAGTCCATGTGATATTCTGAAGAAATGTGATTGGTTT  441

seq1  GTTTTTTGAAATAGGTTGATCAGGTAGGTGTGGGATGACATTATTGGAAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTGAAATAGGTTGATCAGGTAGGTGTGGGATGACATTATTGGAAA  491

seq1  TGACATTGTCTCTGAATTCTACACAGTCACCACTGATATTCCCAAGGGCC  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTGTCTCTGAATTCTACACAGTCACCACTGATATTCCCAAGGGCC  541

seq1  CACACAGCCTGCTCAGACATGATCCTGTCTGGGGGAACAGAGGACTTCAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACAGCCTGCTCAGACATGATCCTGTCTGGGGGAACAGAGGACTTCAA  591

seq1  TCAGGGGCTCCTTTCACAACAGCTTGAGTCTGCTCTGAAGTCCCTGAGGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCTCCTTTCACAACAGCTTGAGTCTGCTCTGAAGTCCCTGAGGC  641

seq1  AATGTTGGTGAGTGCCCATGCAACCTCCAACTGCAGGTTGGGGAGAGGTG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTGGTGAGTGCCCATGCAACCTCCAACTGCAGGTTGGGGAGAGGTG  691

seq1  CCACCTTCAGGAAGTCCACCAGCTTGGGAATGAGTCCTGCTTCAATAATC  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTTCAGGAAGTCCACCAGCTTGGGAATGAGTCCTGCTTCAATAATC  741

seq1  AAATTTAGAGGAGGGTTATTTTCCTGAGATATCATTTCCCTGGTAGCCTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTAGAGGAGGGTTATTTTCCTGAGATATCATTTCCCTGGTAGCCTG  791

seq1  GGTGGCAGGAAAACACAGGACCGTATCTGAACTATTCACCCCTTGAATGA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCAGGAAAACACAGGACCGTATCTGAACTATTCACCCCTTGAATGA  841

seq1  TGCTGTCCAGAGTGAAGTTGGTCTCTTTGACTAGTACATAAGAAACCACA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGTCCAGAGTGAAGTTGGTCTCTTTGACTAGTACATAAGAAACCACA  891

seq1  TCACTGGAGAATAGATCGATATTTCTTCTCTTTAGCACCTGCTCATCTTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGAGAATAGATCGATATTTCTTCTCTTTAGCACCTGCTCATCTTT  941

seq1  CCTAGTCTTCCAGAGTTGTAGGCTAGAAGCAATCATCTGTTGTCACTGCA  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTCTTCCAGAGTTGTAGGCTAGAAGCAATCATCTGTTGTCACTGCA  991

seq1  AAGACATTTTTTTGCTTCGGTACTTTTATTTCTTCAGCCTCTCTTCTGGA  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACATTTTTTTGCTTCGGTACTTTTATTTCTTCAGCCTCTCTTCTGGA  1041

seq1  GCCTGTGAGGTCACCATATTGACTGGAGGAAAGACCCCACCTACAGAGAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGTGAGGTCACCATATTGACTGGAGGAAAGACCCCACCTACAGAGAG  1091

seq1  CTGCTCATAGCTAGGCAATATCTTATGTGGGGTCCTTAGAATGGGTGTGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCATAGCTAGGCAATATCTTATGTGGGGTCCTTAGAATGGGTGTGG  1141

seq1  CCTCTGGTAAAGCAGCCAGAGTTGTGGAGACTTAACCACAATTCGTTTGT  1193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTGGTAAAGCAGCCAGAGTTGTGGAGACTTAACCACAATTCGTTTGT  1191

seq1  CTTTAGTTGAATTC  1207
      ||||||||||||||
seq2  CTTTAGTTGAATTC  1205

seq1: chr7_59122659_59123780
seq2: B6Ng01-258C24.g_63_1163

seq1  GAATTCCATGCAGCTGTGAAGTGCCACATGGTTTTTAGGAGCTGAACCTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGCAGCTGTGAAGTGCCACATGGTTTTTAGGAGCTGAACCTG  50

seq1  AGCCTTCTTCAAGAGCACAGTGGTTTGAATCCCTGAAACATCTCTCCAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCTTCAAGAGCACAGTGGTTTGAATCCCTGAAACATCTCTCCAGC  100

seq1  CCCAACATTTATGTTTTATTGCTGCTGTTCTGAGAGCAGAAGACCTTCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAACATTTATGTTTTATTGCTGCTGTTCTGAGAGCAGAAGACCTTCAC  150

seq1  TAGTGAGCAGCATGCAAATCAGCATGCTGGCTGTACCTCAATCCACTTGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGCAGCATGCAAATCAGCATGCTGGCTGTACCTCAATCCACTTGC  200

seq1  AGGTTTCCCTCCTCCCTGCTTAGTCTGACCAATAGAAAATGCTTCGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCCCTCCTCCCTGCTTAGTCTGACCAATAGAAAATGCTTCGAAAT  250

seq1  TAGAACAAGACATTATTGAGGGCACTGCAGGCTAGAGAATAGGAATAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACAAGACATTATTGAGGGCACTGCAGGCTAGAGAATAGGAATAATT  300

seq1  AGTAATAAGAATATTAATAAAGGCAAGTTTCCTTTATAATGGTAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAAGAATATTAATAAAGGCAAGTTTCCTTTATAATGGTAAATAAT  350

seq1  TGGAACTATTAGAGAGTTTAATCTGAGTAATAGTAAAGACTACAATCAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAACTATTAGAGAGTTTAATCTGAGTAATAGTAAAGACTACAATCAAT  400

seq1  TATATAATTCTAAGCAAAATCACACTTCATGATGAAATAATTTATTAACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATAATTCTAAGCAAAATCACACTTCATGATGAAATAATTTATTAACA  450

seq1  AGATATTATTTTCAAAAGAAAACTATTTCTTCAGATCAAATAATATTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATATTATTTTCAAAAGAAAACTATTTCTTCAGATCAAATAATATTTTT  500

seq1  AAGTTGGTCTTGGTTACGGACCTTCTGAAATATTGATGAAATATTTCACG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGGTCTTGGTTACGGACCTTCTGAAATATTGATGAAATATTTCACG  550

seq1  GTTGGGGTCACCACAACATGAGGAACTGTACTAAAGGGTTGCAGCATTAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGGTCACCACAACATGAGGAACTGTACTAAAGGGTTGCAGCATTAG  600

seq1  GAAGGTTGAGAACCACTGGTCTAAGTCATATTTTCCAGTAAAATTGTTTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTGAGAACCACTGGTCTAAGTCATATTTTCCAGTAAAATTGTTTT  650

seq1  GAGTGTTAATCATTTAGTTTGTGGTTATCTTATTATTAAGAACACAAACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTTAATCATTTAGTTTGTGGTTATCTTATTATTAAGAACACAAACA  700

seq1  AACAAAGTGAAAAACCCTCCTTAGGGGTTATCTATCACTCTGTCTTTTGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAGTGAAAAACCCTCCTTAGGGGTTATCTATCACTCTGTCTTTTGG  750

seq1  CATTCATGCCTCTTCAGGATTGGAGGTGGTTATAAATGCTGATCTTGGAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCATGCCTCTTCAGGATTGGAGGTGGTTATAAATGCTGATCTTGGAC  800

seq1  TCCCATCTCTCTCCCATAACCAAAGCCAAAGCAAAGGTTATGCCCGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCATCTCTCTCCCATAACCAAAGCCAAAGCAAAGGTTATGCCCGTGGA  850

seq1  CTGTTGACCCTTTCTGTAAGTTTTTCCTGGTCAGAAGTTTTCTCTGAATA  900
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CTGTTGACCCTTTCTGTAAGTTTTTCCTGGTCAG-AGTTTTCTCTG-ATA  898

seq1  CCTTTTTTTTTTTTTTTTTTTTTTTTCTGTGAGCTTTTCATGACTTCCCA  950
      ||      ||||||||||| ||||||||||||||||||||||||||||||
seq2  CC------TTTTTTTTTTTGTTTTTTCTGTGAGCTTTTCATGACTTCCCA  942

seq1  CTGGAGGCAGTGCACTGCCATTGTGCCTGTGGTGTTTTGACTGACTCCTG  1000
      |||||||||||||||||||||||||||||||||| ||||||||||| |||
seq2  CTGGAGGCAGTGCACTGCCATTGTGCCTGTGGTG-TTTGACTGACT-CTG  990

seq1  TGAGCCCTGAGCTCTCAACCCCAGGTGCAGTTCAGACTGACTCACATAGC  1050
      ||||||  |||||||| |||||| |||||| ||||||||||||| |||||
seq2  TGAGCCTGGAGCTCTC-ACCCCA-GTGCAG-TCAGACTGACTCA-ATAGC  1036

seq1  ACATGGTCTTCTTTTCATTTGTATTCACTCATTTCCTTGGGAGAGTTTAT  1100
      |||| ||||||  |||| | | |||||||||  | | ||||| ||| || 
seq2  ACAT-GTCTTC--TTCAATGGAATTCACTCA-ATACGTGGGA-AGTCTA-  1080

seq1  TATTGTAGTTAAACATTTGGAT  1122
      || || || |||||||||||||
seq2  TACTGAAG-TAAACATTTGGAT  1101