BAC Information

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BAC

Clone NameB6Ng01-258J05
Chromosome7 (Build37)
Map Location 78,663,549 - 78,784,845
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100041957
Downstream geneLOC665535, Mctp2, LOC100042873
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-258J05.bB6Ng01-258J05.g
ACCGA063980GA063981
length1,0931,226
definitionB6Ng01-258J05.b B6Ng01-258J05.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(78,783,751 - 78,784,845)(78,663,549 - 78,664,763)
sequence
gaattcacacacaagtaaaggaggtgagtccctttcctggaatctatcaa
cagaggtaaatgttagaaccgaagatcccttctcatttcctttccttgag
cggtctgatggtcattcttgatcctgctgaattgtacactctgaaagttt
acggataccacattctgtgaaaaaaaaaatacccaaggcaagttggttta
actcttgtcatttaccccttatttcttgtttcaacttgtcaaatcaatgt
cttatcagggacatttcttttacttcagttatgttgatagtttgtgtctt
tcatgaaattggccatctatttcttttttactttgttcttggctgttgtt
gttgctgatgttttttgtttgtctttgagattgtgtctcaccatgtagct
caggctatcctgaaactcagatggaatgtataccttttctatggagtaaa
atacgttgtagtagctatttaaaatattgccttatgaaaatgtaagtatt
cataaatctctaatgtcttcaatattatatcatacattagtattttacat
tttttgcttgtcttacaaactttagctagatacttatttaattcaattaa
tttttttattaggtattttccttgtatacatttccaatgctatcccaaaa
gtcccccatacccacctcccaatgccctacccacccactccccctttttg
gccctggcgttcccctgttctggggcatataaagtttgcaagtccaatgg
gcctctctttccagtgatggccgactaggccatcttttgatacatatgca
gctagagacaagagctccggagtactggttagtttatattgttgttccac
atatagggttgcagttcctcaattaatttttactttagattttaaattgc
tattcttttttatagttttcttaaggaaaataataatattgctacatgaa
aatcatgtctcattttcaattataggcatttaatgacataaattttgttt
aagcctgccttagttaccactgagaaacaacagtgagtatgtttttgttg
ataacatttttctgagttatttaatagtatttgcgattcctga

gaattctcaggtaaggtaagagaaacatggttcaattactgtttgaaatc
taaagtgtggtttctaggacagaatcaaggaaattattacagccagtgaa
ctgggcagtgatgttgtccagacatcactaatttttaatttgtaattgat
ctattattgctattgttcattatctaaacatgtctcttgattacattgtt
ttgtgaaaattctataaacaaacataatgaattcccattacttcactcca
ctttcttttatgtccccttttaaactatacattccctctcctctctacag
gtcctaatttcacatttatatcttttatttttgttcttaataacttaaag
ttattttgtaggttgaaaaccatgtactggctgagagaggcccacatgag
ttctagatatgttcagtcaatcatcctttccactagcaatggacagccca
taggatgatggtcagaaggcttagaatggagcctagaagtcttgaactct
tgtagctgttgcaaggcatagcacccgtgtgtgatagtattggttaaaca
atcctacttgtgtttagtaaaagtaggattaagaaagtgtgtcatgcagt
tataagcagtaagtacccaatatttgacagtgtgaacaaatgactaagct
acaggtctaagtatttactaccctattgcttttatcattttataaaatat
actcatattgttcagagaacatgagtatagttttacattttctttccact
ttgtgatatgatgttattgagagtcaaggctctcaagctgaggaaatctc
tacacaatttagagagttaagactgactacattcttcttaacactcccat
tgttcagatagaaaaaggcatgagagatttaaatttagatgatcaaaaaa
tccttcagttagagtttttccatatagtgccaccttagtcactatcattt
aagagcaaaaggcttttcttatttgacatccagaactctgaacagtaaat
actgaatactttcgattgtgtgagagaaaaagacccaaaagaatacagaa
ctgatgctagcagctgagggtgacactttggcggatgaatacccattcca
gggtctccaacaaccttgttcatctcaatgcctgacgatgatatattggt
agaaaggagcgccaactggaagattctgtcttattgggcaccttaaccat
tatgtggcacaatttctctcacatgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_78783751_78784845
seq2: B6Ng01-258J05.b_45_1137 (reverse)

seq1  TCAGGAATCGCAAATACTATTAAAATAAATTCAG-AAAATGTTATCAAAC  49
      ||||||||||||||||||||||||   || |||| ||||||||||| |||
seq2  TCAGGAATCGCAAATACTATTAAA--TAACTCAGAAAAATGTTATC-AAC  47

seq1  AAAAACATACTCAACTG-TGTTTCTCAGTGGTAACTAAGGCAGGCTTAAA  98
      |||||||||||| |||| ||||||||||||||||||||||||||||| ||
seq2  AAAAACATACTC-ACTGTTGTTTCTCAGTGGTAACTAAGGCAGGCTT-AA  95

seq1  ACAAAATTTATGTCATTAAATGCCTATAATTGAAAATGAGACATGATTTT  148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAATTTATGTCATTAAATGCCTATAATTGAAAATGAGACATGATTTT  145

seq1  CATGTAGCAATA-TATTATTTTCCTTAAGAAAACTATAAAAAAGAATAGC  197
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  CATGTAGCAATATTATTATTTTCCTTAAGAAAACTATAAAAAAGAATAGC  195

seq1  AATTTAAAATCTAAAGTAAAAATTAATTGAGGAACTGCAACCCTATATGT  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAAAATCTAAAGTAAAAATTAATTGAGGAACTGCAACCCTATATGT  245

seq1  GGAACAACAATATAAACTAACCAGTACTCCGGAGCTCTTGTCTCTAGCTG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACAACAATATAAACTAACCAGTACTCCGGAGCTCTTGTCTCTAGCTG  295

seq1  CATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGTATCAAAAGATGGCCTAGTCGGCCATCACTGGAAAGAGAGGCCC  345

seq1  ATTGGACTTGCAAACTTTATATGCCCCAGAACAGGGGAACGCCAGGGCCA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGACTTGCAAACTTTATATGCCCCAGAACAGGGGAACGCCAGGGCCA  395

seq1  AAAAGGGGGAGTGGGTGGGTAGGGCATTGGGAGGTGGGTATGGGGGACTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGGGGAGTGGGTGGGTAGGGCATTGGGAGGTGGGTATGGGGGACTT  445

seq1  TTGGGATAGCATTGGAAATGTATACAAGGAAAATACCTAATAAAAAAATT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGGATAGCATTGGAAATGTATACAAGGAAAATACCTAATAAAAAAATT  495

seq1  AATTGAATTAAATAAGTATCTAGCTAAAGTTTGTAAGACAAGCAAAAAAT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGAATTAAATAAGTATCTAGCTAAAGTTTGTAAGACAAGCAAAAAAT  545

seq1  GTAAAATACTAATGTATGATATAATATTGAAGACATTAGAGATTTATGAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAAAATACTAATGTATGATATAATATTGAAGACATTAGAGATTTATGAA  595

seq1  TACTTACATTTTCATAAGGCAATATTTTAAATAGCTACTACAACGTATTT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTACATTTTCATAAGGCAATATTTTAAATAGCTACTACAACGTATTT  645

seq1  TACTCCATAGAAAAGGTATACATTCCATCTGAGTTTCAGGATAGCCTGAG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCCATAGAAAAGGTATACATTCCATCTGAGTTTCAGGATAGCCTGAG  695

seq1  CTACATGGTGAGACACAATCTCAAAGACAAACAAAAAACATCAGCAACAA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATGGTGAGACACAATCTCAAAGACAAACAAAAAACATCAGCAACAA  745

seq1  CAACAGCCAAGAACAAAGTAAAAAAGAAATAGATGGCCAATTTCATGAAA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGCCAAGAACAAAGTAAAAAAGAAATAGATGGCCAATTTCATGAAA  795

seq1  GACACAAACTATCAACATAACTGAAGTAAAAGAAATGTCCCTGATAAGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAACTATCAACATAACTGAAGTAAAAGAAATGTCCCTGATAAGAC  845

seq1  ATTGATTTGACAAGTTGAAACAAGAAATAAGGGGTAAATGACAAGAGTTA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATTTGACAAGTTGAAACAAGAAATAAGGGGTAAATGACAAGAGTTA  895

seq1  AACCAACTTGCCTTGGGTATTTTTTTTTTCACAGAATGTGGTATCCGTAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAACTTGCCTTGGGTATTTTTTTTTTCACAGAATGTGGTATCCGTAA  945

seq1  ACTTTCAGAGTGTACAATTCAGCAGGATCAAGAATGACCATCAGACCGCT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTCAGAGTGTACAATTCAGCAGGATCAAGAATGACCATCAGACCGCT  995

seq1  CAAGGAAAGGAAATGAGAAGGGATCTTCGGTTCTAACATTTACCTCTGTT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAAGGAAATGAGAAGGGATCTTCGGTTCTAACATTTACCTCTGTT  1045

seq1  GATAGATTCCAGGAAAGGGACTCACCTCCTTTACTTGTGTGTGAATTC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATTCCAGGAAAGGGACTCACCTCCTTTACTTGTGTGTGAATTC  1093


seq1: chr7_78663549_78664763
seq2: B6Ng01-258J05.g_68_1293

seq1  GAATTCTCAGGTAAGGTAAGAGAAACATGGTTCAATTACTGTTTGAAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAGGTAAGGTAAGAGAAACATGGTTCAATTACTGTTTGAAATC  50

seq1  TAAAGTGTGGTTTCTAGGACAGAATCAAGGAAATTATTACAGCCAGTGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGTGTGGTTTCTAGGACAGAATCAAGGAAATTATTACAGCCAGTGAA  100

seq1  CTGGGCAGTGATGTTGTCCAGACATCACTAATTTTTAATTTGTAATTGAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCAGTGATGTTGTCCAGACATCACTAATTTTTAATTTGTAATTGAT  150

seq1  CTATTATTGCTATTGTTCATTATCTAAACATGTCTCTTGATTACATTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTATTGCTATTGTTCATTATCTAAACATGTCTCTTGATTACATTGTT  200

seq1  TTGTGAAAATTCTATAAACAAACATAATGAATTCCCATTACTTCACTCCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGAAAATTCTATAAACAAACATAATGAATTCCCATTACTTCACTCCA  250

seq1  CTTTCTTTTATGTCCCCTTTTAAACTATACATTCCCTCTCCTCTCTACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTTTTATGTCCCCTTTTAAACTATACATTCCCTCTCCTCTCTACAG  300

seq1  GTCCTAATTTCACATTTATATCTTTTATTTTTGTTCTTAATAACTTAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTAATTTCACATTTATATCTTTTATTTTTGTTCTTAATAACTTAAAG  350

seq1  TTATTTTGTAGGTTGAAAACCATGTACTGGCTGAGAGAGGCCCACATGAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGTAGGTTGAAAACCATGTACTGGCTGAGAGAGGCCCACATGAG  400

seq1  TTCTAGATATGTTCAGTCAATCATCCTTTCCACTAGCAATGGACAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGATATGTTCAGTCAATCATCCTTTCCACTAGCAATGGACAGCCCA  450

seq1  TAGGATGATGGTCAGAAGGCTTAGAATGGAGCCTAGAAGTCTTGAACTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGATGATGGTCAGAAGGCTTAGAATGGAGCCTAGAAGTCTTGAACTCT  500

seq1  TGTAGCTGTTGCAAGGCATAGCACCCGTGTGTGATAGTATTGGTTAAACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGTTGCAAGGCATAGCACCCGTGTGTGATAGTATTGGTTAAACA  550

seq1  ATCCTACTTGTGTTTAGTAAAAGTAGGATTAAGAAAGTGTGTCATGCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTACTTGTGTTTAGTAAAAGTAGGATTAAGAAAGTGTGTCATGCAGT  600

seq1  TATAAGCAGTAAGTACCCAATATTTGACAGTGTGAACAAATGACTAAGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAGCAGTAAGTACCCAATATTTGACAGTGTGAACAAATGACTAAGCT  650

seq1  ACAGGTCTAAGTATTTACTACCCTATTGCTTTTATCATTTTATAAAATAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGTCTAAGTATTTACTACCCTATTGCTTTTATCATTTTATAAAATAT  700

seq1  ACTCATATTGTTCAGAGAACATGAGTATAGTTTTACATTTTCTTTCCACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCATATTGTTCAGAGAACATGAGTATAGTTTTACATTTTCTTTCCACT  750

seq1  TTGTGATATGATGTTATTGAGAGTCAAGGCTCTCAAGCTGAGGAAATCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTGATATGATGTTATTGAGAGTCAAGGCTCTCAAGCTGAGGAAATCTC  800

seq1  TACACAATTTAGAGAGTTAAGACTGACTACATTCTTCTTAACACTCCCAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACAATTTAGAGAGTTAAGACTGACTACATTCTTCTTAACACTCCCAT  850

seq1  TGTTCAGATAGAAAAAGGCATGAGAGATTTAAATTTAGATGATCAAAAAA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGATAGAAAAAGGCATGAGAGATTTAAATTTAGATGATCAAAAAA  900

seq1  TCCTTCAGTTAGAG-TTTTCCATATAGTGCCACCTTAGTCACTATCATTT  949
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TCCTTCAGTTAGAGTTTTTCCATATAGTGCCACCTTAGTCACTATCATTT  950

seq1  AAGGAGCACAAGGGCTTTCTTATTTGACATCCAGAACTCTGAACAGTAAA  999
      || ||||| ||||  |||||||||||||||||||||||||||||||||||
seq2  AA-GAGCAAAAGGCTTTTCTTATTTGACATCCAGAACTCTGAACAGTAAA  999

seq1  TACTGAA-ACTTTCGGATGTGTGGAAGAGAAAAGACCCAAAAGAATACAG  1048
      ||||||| |||||||  ||||||  ||| |||||||||||||||||||||
seq2  TACTGAATACTTTCGATTGTGTGAGAGA-AAAAGACCCAAAAGAATACAG  1048

seq1  AACTGAGTGCCTAGCAGCTGAGGTGGACAC-TTGGC-GATG-ATACCCA-  1094
      |||||| || |||||||||||||  ||||| ||||| |||| ||||||| 
seq2  AACTGA-TG-CTAGCAGCTGAGGGTGACACTTTGGCGGATGAATACCCAT  1096

seq1  TCCA-GGTCTCCCAAACATACCCTGTTCATCTCAGTG-CTGACGATGATA  1142
      |||| |||||||  |||| ||| ||||||||||| || ||||||||||||
seq2  TCCAGGGTCTCC--AACA-ACCTTGTTCATCTCAATGCCTGACGATGATA  1143

seq1  CATATGGTAGAAA-GAGCGCACACT-GAAGATTCTG-CTTATTGGGCA-C  1188
       || ||||||||| ||||||  ||| |||||||||| ||||||||||| |
seq2  TAT-TGGTAGAAAGGAGCGCCAACTGGAAGATTCTGTCTTATTGGGCACC  1192

seq1  TTAAC---TATGT-GCACAATTTCT---ACATGG  1215
      |||||   ||||| |||||||||||   ||||||
seq2  TTAACCATTATGTGGCACAATTTCTCTCACATGG  1226


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