BAC Information

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BAC

Clone NameB6Ng01-261J15
Chromosome7 (Build37)
Map Location 112,760,636 - 112,761,087
singlet/doubletsinglet
Overlap geneTrim3
Upstream geneOlfr656, Olfr657, Olfr658, LOC667882, Olfr659, GA_x5J8B7W3SPQ-80592-80214, Olfr661, LOC625495, Olfr662-ps1, Olfr663, Olfr664, EG625530, LOC100042613, LOC233637, Dub1a, Dub1, Olfr665, Olfr666, Olfr667, Olfr668, Olfr669, EG545987, Olfr670, Olfr671, Olfr672, GA_x5J8B7W6B6J-189947-189022, Olfr674-ps1, Olfr675, Olfr676, Olfr677, LOC667987, Olfr678, Olfr679, Olfr680-ps1, Olfr681, Olfr682-ps1, Olfr683, Olfr684, Olfr685, Olfr686, EG668035, Olfr688, Olfr689, Olfr690, Olfr691, Olfr692, EG545989, 4632419K20Rik, Cnga4, EG244189, Cckbr, Prkcdbp, Smpd1, Apbb1, Hpxn
Downstream geneArfip2, Fxc1, Dnhd1, LOC100042811, LOC672646, 1500003O22Rik, Ilk, Taf10, Tpp1, Dchs1, Mrpl17, 9130208D14Rik, LOC626055, LOC100042856, LOC100042047, EG668108, EG668117, Gvin1, LOC672660, LOC100042097, LOC668128, LOC634394, EG209380, EG668139, Gm1966
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261J15.bB6Ng01-261J15.g
ACCGA066231GA066232
length446893
definitionB6Ng01-261J15.b B6Ng01-261J15.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ttcatggagacaaaagtgaccttgaactgctgttcttccctccacctcca
agcactgggattactggtgtgtatcaccacacttagcctcttctgtgtcc
tctgactcaaactctctccttctctattttttggttaattctactggtac
tttaggtctccccttgtatcaatgccttctgctcaactctcccacagttc
cctgtacctacccagaatctatcacttcagatggtaatttcctgcttttt
tcctctaccctgagctactcaaacctagaagacagggaatgtgtttgttt
tgcttacatggagtccccagcttctagcatagtgcctaggacaaagtagc
caagccataactgtttattggttcagtgaaggagttcaagggggcttaaa
agaggaggggagggagaaaggagttttttgaagaggaggggtgact
gaattcctgatctttccaagacttttaacatgaagagatgcaaaatattg
tcaaatgctttttcaacatctaatgaaatgatcatgtgggttttttttct
ttaagtttgtttatatagtggattaccatatattgaaccattcctgcatc
cctaggatgaagtctacttgatcgtggtgaatgatcattttgatgtgttc
ttggattcagttgtcaagaattttattgagtatttttgcattgatgttca
taagggagattggtctgaagttctatttctttgttctgtgtggtttaggt
ataagtataaatgtggcttcatagaacatattggataatgttcctctgtt
tctattttgtggaatagtttgaagagtattggtattaggtctccacaaaa
ctcatctggtcctgggcttttattggtttggagactattaatgactattt
ctatttctttagaggatatgggactgattagatcatttatgtaatcctgg
tttaactttggcacctagtatgtgtatgaaaaaattgtccatttcatcca
gattttccaattttttgagtatgagcttttgtagtaggatctgatatttt
tgaatttcctcagtttctgttgctatgtctcttttttcatttctgagttt
actaatttggatactgtctctgtgccctctggctaatggtttatctatat
tgttgattttctcaaagaaccagctcctggatttgttgattctttgtata
cttcttttttgtttctattaggtttatttcagccctgagtttattatttc
ctgctgtctactcctcttgggtattatttgcttcttttttgttctagagc
tttccagtgtgctgaaaagcttgctagtgtaagctcctcttca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_112760636_112761087
seq2: B6Ng01-261J15.b_50_501

seq1  GAATTCTTCATGGAGACAAAAGTGACCTTGAACTGCTGTTCTTCCCTCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCATGGAGACAAAAGTGACCTTGAACTGCTGTTCTTCCCTCCA  50

seq1  CCTCCAAGCACTGGGATTACTGGTGTGTATCACCACACTTAGCCTCTTCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCAAGCACTGGGATTACTGGTGTGTATCACCACACTTAGCCTCTTCT  100

seq1  GTGTCCTCTGACTCAAACTCTCTCCTTCTCTATTTTTTGGTTAATTCTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCCTCTGACTCAAACTCTCTCCTTCTCTATTTTTTGGTTAATTCTAC  150

seq1  TGGTACTTTAGGTCTCCCCTTGTATCAATGCCTTCTGCTCAACTCTCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTACTTTAGGTCTCCCCTTGTATCAATGCCTTCTGCTCAACTCTCCCA  200

seq1  CAGTTCCCTGTACCTACCCAGAATCTATCACTTCAGATGGTAATTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTCCCTGTACCTACCCAGAATCTATCACTTCAGATGGTAATTTCCTG  250

seq1  CTTTTTTCCTCTACCCTGAGCTACTCAAACCTAGAAGACAGGGAATGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTCCTCTACCCTGAGCTACTCAAACCTAGAAGACAGGGAATGTGT  300

seq1  TTGTTTTGCTTACATGGAGTCCCCAGCTTCTAGCATAGTGCCTAGGACAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTTGCTTACATGGAGTCCCCAGCTTCTAGCATAGTGCCTAGGACAA  350

seq1  AGTAGCCAAGCCATAACTGTTTATTGGTTCAGTGAAGGAGTTCAAGGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGCCAAGCCATAACTGTTTATTGGTTCAGTGAAGGAGTTCAAGGGGG  400

seq1  CTTAAAAGAGGAGGGGAGGGAGAAAGGAGTTTTTTGAAGAGGAGGGGTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAAGAGGAGGGGAGGGAGAAAGGAGTTTTTTGAAGAGGAGGGGTGA  450

seq1  CT  452
      ||
seq2  CT  452