BAC Information

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BAC

Clone NameB6Ng01-262K22
Chromosome7 (Build37)
Map Location 3,118,966 - 3,120,114
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100041028, LOC627003, EG664817
Downstream geneSpeer9-ps1, AU018091, LOC100041503, Nlrp12, GA_x5J8B7W3939-136239-135295, LOC384710, Myadm, Prkcc, Cacng7, LOC672553, Cacng8, Cacng6, LOC100041095, 9930022N03Rik, LOC100041109, Oscar, Ndufa3, Tfpt, Prpf31, Cnot3, Leng1, Tmc4, Leng4, Tsen34, Rps9, Lilrb3, Pira1, LOC100041137, LOC100041146, Pira2, LOC675749, LOC100038908, LOC100038909, Pira11, Pira3, LOC100041186, LOC664841, Lair1, Ttyh1, Leng8, Leng9, Cdc42ep5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-262K22.bB6Ng01-262K22.g
ACCGA067032GA067033
length1,1961,162
definitionB6Ng01-262K22.b B6Ng01-262K22.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctgatctttccagaacttttatcatgaatgggtgttggatcttg
tcaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttggattcggttagcgagaattttattaaggatttttgc
atcgatgttcataagagaaattggtctgaagttctctatctttgttggat
ctttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttg
ggtagaataccttctacttctatcttgtgaaaaagtttgtgcagaactgg
agttagatcttctttgaaggtctgatagaactctgcactaaacccgtctg
gtcctgggctttttttggctgggagactattaataactgcttctatttct
ttaggggatatgggactgtttagaaggtcaacttgatcctgattcaactt
tggtacctggtatctgtccagaaatttgtccatttcgtccaggttttcca
gttttgttgagtatagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgattttgttaat
taggattttgtccctgtgccctttagtgagtctagctaagggtttatcta
tcttgttgatttttctcaaagaaccaactcctcgtttggttaattctttg
aatagttcttcttgtttccacttggttgatttcacccctgagtttgatta
tttcctgccgtctactcctcttgggtgaatttgcttccttttttttctag
agcttttagatgtgttgtcaagctgctagtatgtgctctctccgtttttt
cttgaaggcactcatagctatgagtttccctctagaatgcttcattgtgt
cccaaagatttgggtacgttgtggctcatttcataaactctaaagtctta
aattcttctttatccttcccttgaccaagttcatgagagaagggttgtac
agtttcatgtgaatgtttggcctttcgtaaatcaattggtaatgaagata
cgcctagctcattggggtactcgtatgggtaacaactgggcgggac
gaattccttccctaaagaaaaagtcctgctattcaaacataacttaaaac
atctttgggaagataaaatacttgcctgtgctacagaatgagactcgact
gagaaaaatggatacacaaggtcagttgtcactatgaaactcaagctacc
aaaaggaagtggcactatattgactcaggatttcagagctcgggatttta
gcattactgcgtaaaaagttttgaagggacagaagtgaagaaataagcca
cacttttgtacagataccaacttctgaaaacgttggtgtctttacaatga
gcattaaatgcagtctgatttgcagtagtaatcttcaatagacaagctgc
tttgttgctgcctttatggacatgggtaccaattgcttttggtaatatgg
taaaaatgtgagctagcgggctggagagatggctcagtggttaagagcac
tgactgctcttccaaaggtcctgagttcaaattccagcaaccacatggtg
actcacaatcatccctaatgagatctggtgccctcttctggtgtgtctga
agacagctatggtgtactcacataaataaaataaatcttttaaaaaatgt
gagctagcacttctgcattgattttataacatgtattcagattgagaatg
tgattttaatgcttaaacctcatggagtttgtttttaatttcaaacacat
cttactgtgcttgaatgtgccctggtttgttagcacacctagacttgctg
taactgcactcatgtaacagtatgtaccttccctctaggaaagagaaaaa
cactagccttaggttgtatctagtgattttccttgtgtcctttaagaaaa
attaagactattatttccttccctttcctgtgcagcattcaaaaatcacc
cctagaaaaagtgagttgctttaatgagacttccctaggaagggatgcaa
ggtgaaacaaaagtattcttgtatctcagttttgtgaaagttaaagctac
tattgttttaaagtataatttagaagtcttcttcaaaaacagtcctgtat
ttgatctctatttcatagtttttttattttaaacagttagaacaaactgc
ctgggaaattaccaggcaatttctgcattagcagttaccttatacaggct
cttatttcagct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_3118966_3120114
seq2: B6Ng01-262K22.g_65_1226 (reverse)

seq1  AGCTGAA--TAGAG-CTGTATATG--TACTGCTTAATGCAGGAAATTGC-  44
      |||||||   |||| ||||||| |   ||||| ||||||| |||||||| 
seq2  AGCTGAAATAAGAGCCTGTATAAGGTAACTGC-TAATGCA-GAAATTGCC  48

seq1  -TGTAATTTCC--AGCAGTTTTGTCTAAACTGTTTAAA--TAAAAAACTA  89
        |||||||||   |||||||  ||| |||||||||||   |||||||||
seq2  TGGTAATTTCCCAGGCAGTTTGTTCT-AACTGTTTAAAATAAAAAAACTA  97

seq1  TG-AATAGAGATCAAATACAGGACTG-TTTTGAAG-AGACTTTCTAAATT  136
      || ||||||||||||||||||||||| |||||||| |||| |||||||||
seq2  TGAAATAGAGATCAAATACAGGACTGTTTTTGAAGAAGAC-TTCTAAATT  146

seq1  ATACTTTAAAAC-ATAGTAGCTTTAACTTTCACAAAACTGAGATACAAGA  185
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  ATACTTTAAAACAATAGTAGCTTTAACTTTCACAAAACTGAGATACAAGA  196

seq1  ATACTTTTGTTTCACCTTGCATCCCTTCCTA-GGAAGTCTCATTAAAGC-  233
      ||||||||||||||||||||||||||||||| ||||||||||||||||| 
seq2  ATACTTTTGTTTCACCTTGCATCCCTTCCTAGGGAAGTCTCATTAAAGCA  246

seq1  ACTCACTTTTTCTAGGGGTGATTTTTGAATGCTGCACAGGAAAGGGAAGG  283
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCACTTTTTCTAGGGGTGATTTTTGAATGCTGCACAGGAAAGGGAAGG  296

seq1  AAATAATAGTCTTAATTTTTCTTAAAGGACACAAGGAAAATCACTAGATA  333
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAATAGTCTTAATTTTTCTTAAAGGACACAAGGAAAATCACTAGATA  346

seq1  CAACCTAAGGCTAGTGTTTTTCTCTTTCCTAGAGGGAAGGTACATACTGT  383
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCTAAGGCTAGTGTTTTTCTCTTTCCTAGAGGGAAGGTACATACTGT  396

seq1  TACATGAGTGCAGTTACAGCAAGTCTAGGTGTGCTAACAAACCAGGGCAC  433
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGAGTGCAGTTACAGCAAGTCTAGGTGTGCTAACAAACCAGGGCAC  446

seq1  ATTCAAGCACAGTAAGATGTGTTTGAAATTAAAAACAAACTCCATGAGGT  483
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAAGCACAGTAAGATGTGTTTGAAATTAAAAACAAACTCCATGAGGT  496

seq1  TTAAGCATTAAAATCACATTCTCAATCTGAATACATGTTATAAAATCAAT  533
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGCATTAAAATCACATTCTCAATCTGAATACATGTTATAAAATCAAT  546

seq1  GCAGAAGTGCTAGCTCACATTTTTTAAAAGATTTATTTTATTTATGTGAG  583
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGTGCTAGCTCACATTTTTTAAAAGATTTATTTTATTTATGTGAG  596

seq1  TACACCATAGCTGTCTTCAGACACACCAGAAGAGGGCACCAGATCTCATT  633
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCATAGCTGTCTTCAGACACACCAGAAGAGGGCACCAGATCTCATT  646

seq1  AGGGATGATTGTGAGTCACCATGTGGTTGCTGGAATTTGAACTCAGGACC  683
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGATGATTGTGAGTCACCATGTGGTTGCTGGAATTTGAACTCAGGACC  696

seq1  TTTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCG  733
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGAAGAGCAGTCAGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCG  746

seq1  CTAGCTCACATTTTTACCATATTACCAAAAGCAATTGGTACCCATGTCCA  783
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCTCACATTTTTACCATATTACCAAAAGCAATTGGTACCCATGTCCA  796

seq1  TAAAGGCAGCAACAAAGCAGCTTGTCTATTGAAGATTACTACTGCAAATC  833
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGGCAGCAACAAAGCAGCTTGTCTATTGAAGATTACTACTGCAAATC  846

seq1  AGACTGCATTTAATGCTCATTGTAAAGACACCAACGTTTTCAGAAGTTGG  883
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGCATTTAATGCTCATTGTAAAGACACCAACGTTTTCAGAAGTTGG  896

seq1  TATCTGTACAAAAGTGTGGCTTATTTCTTCACTTCTGTCCCTTCAAAACT  933
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGTACAAAAGTGTGGCTTATTTCTTCACTTCTGTCCCTTCAAAACT  946

seq1  TTTTACGCAGTAATGCTAAAATCCCGAGCTCTGAAATCCTGAGTCAATAT  983
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACGCAGTAATGCTAAAATCCCGAGCTCTGAAATCCTGAGTCAATAT  996

seq1  AGTGCCACTTCCTTTTGGTAGCTTGAGTTTCATAGTGACAACTGACCTTG  1033
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCCACTTCCTTTTGGTAGCTTGAGTTTCATAGTGACAACTGACCTTG  1046

seq1  TGTATCCATTTTTCTCAGTCGAGTCTCATTCTGTAGCACAGGCAAGTATT  1083
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCCATTTTTCTCAGTCGAGTCTCATTCTGTAGCACAGGCAAGTATT  1096

seq1  TTATCTTCCCAAAGATGTTTTAAGTTATGTTTGAATAGCAGGACTTTTTC  1133
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTCCCAAAGATGTTTTAAGTTATGTTTGAATAGCAGGACTTTTTC  1146

seq1  TTTAGGGAAGGAATTC  1149
      ||||||||||||||||
seq2  TTTAGGGAAGGAATTC  1162