BAC Information

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BAC

Clone NameB6Ng01-263M05
Chromosome7 (Build37)
Map Location 70,692,750 - 70,693,515
singlet/doubletsinglet
Overlap geneOtud7a
Upstream geneEG665038, LOC669222, LOC384631, LOC622243, EG622251, Chrna7, LOC545971
Downstream geneLOC100041386, LOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263M05.bB6Ng01-263M05.g
ACCGA067846GA067847
length1,216914
definitionB6Ng01-263M05.b B6Ng01-263M05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacctaaatataataaaagcaatctccaggaaacca
gtagccaacatcaaagtaaatggtgagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctacctattcaacatta
tacttaaagtcctagacagagcaattcgacaacaaaagagatcaagggga
tacaaattggaaaggaagaagtcaaagtatcactttttgcaggtgatatg
atagtatatataagtgaccctaaaaattccaccagagaactcctcaatct
gataaacagcttcagtaaagtagctggatataaaattaactcaaacaaga
caatggcgtttctctacacaaagaataaacaggctgagaaagaaattaga
gatacaacacccttctcaatagtcacaaataatataaaataccttgatgt
gactctaactaaggacgtgaaagatctgtatgataagaacttcttctgaa
gaaagaaattaaaaagatctcagaagatggaaatatctcccatgctcatg
gattggcaggatcaacattgtaaaaatggctatcttgccaaaagcaatct
acagattcaatgcaatcaccatcaaaattccaactcaattcttcaatgaa
ttagaaagagcaatctgcaaattcatctggaataacaaaaaacctaggat
agcaaaaactattctcaaggataaaagaatctctggaggaatcaccatgc
ctgacctaaagctgtactacagagcaattgtgataaaaactgcatggtac
tgatatagcaacagacaagtagaccaatggaatagaattgaagatccaga
aatgaacccatacacctatggtcacttgatctttgacaagggagctaaaa
ccatctagtggaaaaaagacagcattttgaagaaatggtgctggcataac
tggcgattatcatgtagaagaacgcgaatgatccattcctatctccttgt
actaagtcaaatctagtggattaggaattccccataaaaccagagacact
gaaactatagaggagaaagtggggaaagctcaagatatgggcacaggaaa
aatctgatagaacagcaatggcttgtgctgtagatcggaaatgacaaatg
gaacttatgaactgcaagctctgcaggcaaagaacctgtcttagacgatt
tccaccaccgatttga
gaattcagtgttctttctaatgctaggttcatgggtacccagttctttgt
gagccagaagttgtgtgatcacaggactgcatccttgaattcttcttcct
tataatcgtctgctacttcctttcaatgacctgtgacagctaggatttgg
gatggggtgcagctcagtagtaaagcactttcctactatgtgcattccaa
acacacacacacacacacacacacacacacacacacacacacacacacag
ctggtgggcagaggggagagactttgttgaaagtactgagcagtctaaga
gtctgtctttaggatctcttgtgtatagcaacataatttgacttccattc
ctattcatatcctccttatttccttcttttgttttattgctctagctaag
actttaaggactaaagtgaacagggacagagaaagtagacactcctgaat
ttttgtttttagttttaatgtagtgcctccagttttcctccacttatgat
gttgtaggctgtgggtttgtcaaatagagcctttattaatgttaaggtag
gttccttccagttctagtttatctagggcttttgccatggaggagtattt
gattttgtcaatggagatggcaatgtgaattctgtccctaaatccatttg
tatggtttattgtacttattgttttatgtatgttgacttctccctgcatc
tctggaataggtcctctgtgattgtggcaaatgatctttttggtgtgttc
tgggtgtttggttttgaaagtattttgttgagaatacctgtaggtatctg
tgagagccacttggtctcaaatgtttctctgtttatatttttgttttgat
tacatgtctgggtggtggaagtgatgtattggaggttatctactatttaa
tgtattggagctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_70692750_70693515
seq2: B6Ng01-263M05.g_67_833

seq1  GAATTCAGTGTTCTTTCTAATGCTAGGTTCATGGGTACCCAGTTCTTTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTGTTCTTTCTAATGCTAGGTTCATGGGTACCCAGTTCTTTGT  50

seq1  GAGCCAGAAGTTGTGTGATCACAGGACTGCATCCTTGAATTCTTCTTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAGAAGTTGTGTGATCACAGGACTGCATCCTTGAATTCTTCTTCCT  100

seq1  TATAATCGTCTGCTACTTCCTTTCAATGACCTGTGACAGCTAGGATTTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAATCGTCTGCTACTTCCTTTCAATGACCTGTGACAGCTAGGATTTGG  150

seq1  GATGGGGTGCAGCTCAGTAGTAAAGCACTTTCCTACTATGTGCATTCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGGGTGCAGCTCAGTAGTAAAGCACTTTCCTACTATGTGCATTCCAA  200

seq1  ACACACACACACACACACACACACACACACACACACACACACACACACAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACACACACACACACAG  250

seq1  CTGGTGGGCAGAGGGGAGAGACTTTGTTGAAAGTACTGAGCAGTCTAAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGGCAGAGGGGAGAGACTTTGTTGAAAGTACTGAGCAGTCTAAGA  300

seq1  GTCTGTCTTTAGGATCTCTTGTGTATAGCAACATAATTTGACTTCCATTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTCTTTAGGATCTCTTGTGTATAGCAACATAATTTGACTTCCATTC  350

seq1  CTATTCATATCCTCCTTATTTCCTTCTTTTGTTTTATTGCTCTAGCTAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTCATATCCTCCTTATTTCCTTCTTTTGTTTTATTGCTCTAGCTAAG  400

seq1  ACTTTAAGGACTAAAGTGAACAGGGACAGAGAAAGTAGACACTCCTGAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTAAGGACTAAAGTGAACAGGGACAGAGAAAGTAGACACTCCTGAAT  450

seq1  TTTTGTTTTTAGTTTTAATGTAGTGCCTCCAGTTTTCCTCCACTTATGAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTTAGTTTTAATGTAGTGCCTCCAGTTTTCCTCCACTTATGAT  500

seq1  GTTGTAGGCTGTGGGTTTGTCAAATAGAGCCTTTATTAATGTTAAGGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTAGGCTGTGGGTTTGTCAAATAGAGCCTTTATTAATGTTAAGGTAG  550

seq1  GTTCCTTCCAGTTCTAGTTTATCTAGGGCTTTTGCCATGGAGGAGTATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCTTCCAGTTCTAGTTTATCTAGGGCTTTTGCCATGGAGGAGTATTT  600

seq1  GATTTTGTCAATGGAGATGGCAATGTGAATTCTGTCCCTAAATCCATTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTTGTCAATGGAGATGGCAATGTGAATTCTGTCCCTAAATCCATTTG  650

seq1  TATGGTTTATTGTACTTATTGTTTTATGTATGTTGACTTCTCCCTGCATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGTTTATTGTACTTATTGTTTTATGTATGTTGACTTCTCCCTGCATC  700

seq1  TCTGGAATAGGTCCTCTGTGATTGTGGCAAATGATCTTTTTGGTGTGTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGAATAGGTCCTCTGTGATTGTGGCAAATGATCTTTTTGGTGTGTTC  750

seq1  T-GGTGTTTGGTTTTGA  766
      | |||||||||||||||
seq2  TGGGTGTTTGGTTTTGA  767