BAC Information

Click to search

BAC

Clone NameB6Ng01-265D19
Chromosome7 (Build37)
Map Location 71,911,448 - 71,912,627
singlet/doubletsinglet
Overlap gene5730507A09Rik
Upstream geneLOC665083, Klf13, E030018B13Rik, Trpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2
Downstream geneNdnl2, Tjp1, Gm1693, EG665234, Tarsl2, Tm2d3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265D19.bB6Ng01-265D19.g
ACCGA068939GA068940
length9291,169
definitionB6Ng01-265D19.b B6Ng01-265D19.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcctcaatggcgcttaagctaccatgtgtctaggaagcaccaatga
cattcattcagaatggtagaatgaatgctggaatttactgcaggctttca
ggcttgggggctgctggcaggtgctaggattctggcttctgtgtcttaag
tagaaatagttaacagaggtgacagtagtcaggaaggtgtggaaggccat
aatgccaagtgtccataccgtgaacatgttagaagcaccatttatatacc
attttcctatggtcttttgtaggaggaagacacatcatagcggctttcag
aaacactgaaatttctctggtattcttatagtgtttaaaaatcagagtct
cagatggtaggttaaaagttcagtctcttctgtccttcagtaggatgggt
aaattagcaggtgcatacagagaggtagtgcttggtgttaaaagaaatga
cctatcaagccaggagaagacaagggaaaacctgaaatgcttatcaccaa
agcaaaggagccatccaggaaaggctgcatggctttgataaaagtcaatt
tgtggagaaggtcaaaagatcagaagttacaagggagtggagaaggtcaa
aagatgggaagttacaagggagcagagaaagtcaataatcaggagttaca
gaaaagggatacgtaggcaaaacagtgttcttagggcagtgaaatgcttt
tgttgctgctgtgactgtgaatacacatcattacacatgtgtctgagcca
cagaatgcttaacaccaagagtgggtcccaacataagccctagacttgga
gtcttaatgattaatcagtggggttcctgatgataactcatgtgccttcc
tggtggggggtgttggtagcaggggaggctatgaatatgctgagggaggt
aacgtatgggaatatttctctctcatatg
gaattccatgactgcagaaacttggggttccttgcaacccaggcaccctc
tctagagaatgacttctttctgtttctctttagatgttaactctgtgtta
gagccggggattaattgtggttagtcatgagatggcatgaattatatgac
tttgctttccaaataggctgtacctctgagtgtagatagaatccccccat
aaaggggtctctgaaaccctatcctctccttccctccaattcggaggtac
atctgctttcggacttcctcgttcctcccagctcagtgccatggaggttc
caatgtgtttaggaacctgccctttcatatttgcccttcagaactatcaa
gttcatgacttccattttatcccctggccagctttgtccttggaagcccc
ttagtctagcttgcttcctgttgaggaaggagcccagtcacagtagcgtc
atcaagttgtggtctctgtaagtgggaaacagatgtagtaaatctcctga
gcgtcacaactcagcctcatctgccttcaacatgcttagacatgcttcaa
catgctaagaacacacagcagcagcctatggttgagcacaatgcgaagtt
tatgcaaagtctctttcctaggagtgtgctgccaagtcgtgcaatttatg
aaaatataagatcttagcattgaaagcagtttctactgaacagcatgtga
cttttctaccaccataaagtccaaaagaagcccaagacaaatcggcagca
gccagtgactgtctagaaattcctttttgttcccgagagggtggacctca
agttgagtagtactttttcttcaattcacatctgaaaatgaaggaggaag
gacacggagggaagaggcgaaaaaatgcagcccagaaggagggtgaactc
tcccagaaacacagcttatgatatagttagggaagaggctgcggctaaga
ctccatgttacagagtcgagctagagaggaggagcaggaagaaggcagag
gcaggacagggcaggaagcagagaaatcatatctgaaaacacaacagcag
tgcttgaactgagagaagagatgattactggaggtgctgagttcagcaac
gtgtttgggtcctcgaacctgggagtcaaccactggtgatcaacacctgg
cacctaccgggtgagaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71911448_71912627
seq2: B6Ng01-265D19.g_68_1236

seq1  GAATTCCATGACTGCAGAAACTTGGGGTTCCTTGCAACCCAGGCACCCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATGACTGCAGAAACTTGGGGTTCCTTGCAACCCAGGCACCCTC  50

seq1  TCTAGAGAATGACTTCTTTCTGTTTCTCTTTAGATGTTAACTCTGTGTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGAGAATGACTTCTTTCTGTTTCTCTTTAGATGTTAACTCTGTGTTA  100

seq1  GAGCCGGGGATTAATTGTGGTTAGTCATGAGATGGCATGAATTATATGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCGGGGATTAATTGTGGTTAGTCATGAGATGGCATGAATTATATGAC  150

seq1  TTTGCTTTCCAAATAGGCTGTACCTCTGAGTGTAGATAGAATCCCCCCAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTTCCAAATAGGCTGTACCTCTGAGTGTAGATAGAATCCCCCCAT  200

seq1  AAAGGGGTCTCTGAAACCCTATCCTCTCCTTCCCTCCAATTCGGAGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGGTCTCTGAAACCCTATCCTCTCCTTCCCTCCAATTCGGAGGTAC  250

seq1  ATCTGCTTTCGGACTTCCTCGTTCCTCCCAGCTCAGTGCCATGGAGGTTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCTTTCGGACTTCCTCGTTCCTCCCAGCTCAGTGCCATGGAGGTTC  300

seq1  CAATGTGTTTAGGAACCTGCCCTTTCATATTTGCCCTTCAGAACTATCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTGTTTAGGAACCTGCCCTTTCATATTTGCCCTTCAGAACTATCAA  350

seq1  GTTCATGACTTCCATTTTATCCCCTGGCCAGCTTTGTCCTTGGAAGCCCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATGACTTCCATTTTATCCCCTGGCCAGCTTTGTCCTTGGAAGCCCC  400

seq1  TTAGTCTAGCTTGCTTCCTGTTGAGGAAGGAGCCCAGTCACAGTAGCGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGTCTAGCTTGCTTCCTGTTGAGGAAGGAGCCCAGTCACAGTAGCGTC  450

seq1  ATCAAGTTGTGGTCTCTGTAAGTGGGAAACAGATGTAGTAAATCTCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTTGTGGTCTCTGTAAGTGGGAAACAGATGTAGTAAATCTCCTGA  500

seq1  GCGTCACAACTCAGCCTCATCTGCCTTCAACATGCTTAGACATGCTTCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCACAACTCAGCCTCATCTGCCTTCAACATGCTTAGACATGCTTCAA  550

seq1  CATGCTAAGAACACACAGCAGCAGCCTATGGTTGAGCACAATGCGAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGCTAAGAACACACAGCAGCAGCCTATGGTTGAGCACAATGCGAAGTT  600

seq1  TATGCAAAGTCTCTTTCCTAGGAGTGTGCTGCCAAGTCGTGCAATTTATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCAAAGTCTCTTTCCTAGGAGTGTGCTGCCAAGTCGTGCAATTTATG  650

seq1  AAAATATAAGATCTTAGCATTGAAAGCAGTTTCTACTGAACAGCATGTGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATATAAGATCTTAGCATTGAAAGCAGTTTCTACTGAACAGCATGTGA  700

seq1  CTTTTCTACCACCATAAAGTCCAAAAGAAGCCCAAGACAAATCGGCAGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTCTACCACCATAAAGTCCAAAAGAAGCCCAAGACAAATCGGCAGCA  750

seq1  GCCAGTGACTGTCTAGAAATTCCTTTTTGTTCCCGAGAGGGTGGACCTCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTGACTGTCTAGAAATTCCTTTTTGTTCCCGAGAGGGTGGACCTCA  800

seq1  AGTTGAGTAGTACTTTTTCTTCAAATTCACATCTGAAAATGAAGGAGGAA  850
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  AGTTGAGTAGTACTTTTTCTTC-AATTCACATCTGAAAATGAAGGAGGAA  849

seq1  GGACACGGAGGGAAGAGGCGAAAAAATGCAGCCCAGAAGGAGGGTGAACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACGGAGGGAAGAGGCGAAAAAATGCAGCCCAGAAGGAGGGTGAACT  899

seq1  CTCCCAGAAACACAGCTTATGATATAGGTTAGGGAAGAAGGCTGCGGCTA  950
      |||||||||||||||||||||||||| |||||||||| ||||||||||||
seq2  CTCCCAGAAACACAGCTTATGATATA-GTTAGGGAAG-AGGCTGCGGCTA  947

seq1  AGACTCCATGTTACAGAGTCCGAGCTAGAGAGGAGGGAGCAGGAAG-AGG  999
      ||||||||||||||||||| |||||||||||||| ||||||||||| |||
seq2  AGACTCCATGTTACAGAGT-CGAGCTAGAGAGGA-GGAGCAGGAAGAAGG  995

seq1  CAGGAGGCAGGGACAGGGGCAGGAAGCAGGAGAAAATCCATATCTTGGAA  1049
      || |||||| ||||| |||||||||||| ||||||   |||||||  |||
seq2  CA-GAGGCA-GGACA-GGGCAGGAAGCA-GAGAAA--TCATATCT--GAA  1037

seq1  AACACACAAGCAGTGCTTTGAACTGAGAG-AGAGATGATTACCTGGA-GT  1097
      ||||||  |||||||| |||||||||||| ||||||||||| ||||| ||
seq2  AACACAACAGCAGTGC-TTGAACTGAGAGAAGAGATGATTA-CTGGAGGT  1085

seq1  GCTGAAGTCAGCAGCGGTGTTTGGGTCCCCAGAGCT-GGAGTCAACCACC  1146
      |||||  |||||| | |||||||||||| |  | || ||||||||||| |
seq2  GCTGAGTTCAGCAAC-GTGTTTGGGTCCTCGAACCTGGGAGTCAACCA-C  1133

seq1  TGGTGATCAACACTTGCAACCTAC--GGTGAGAAAC  1180
      ||||||||||||| ||  ||||||  ||||||||||
seq2  TGGTGATCAACACCTGGCACCTACCGGGTGAGAAAC  1169