BAC Information

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BAC

Clone NameB6Ng01-265O05
Chromosome7 (Build37)
Map Location 71,089,334 - 71,090,203
singlet/doubletsinglet
Overlap genenone
Upstream geneChrna7, Otud7a, LOC545971, LOC100041386, LOC665083, Klf13, E030018B13Rik
Downstream geneTrpm1, BB128963, Mtmr15, LOC100041582, Mphosph10, Mcee, Apba2, 5730507A09Rik, Ndnl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-265O05.bB6Ng01-265O05.g
ACCGA069421GA069422
length8761,173
definitionB6Ng01-265O05.b B6Ng01-265O05.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattgaaacacattgtgtggcatctaagttaaagctcagaacttc
tgtaggatgctctgattctcattgagcccatatggttccttttggtctag
aggcttataacctaaaagtaaattgtcagtaccctcagccctcactgtat
ttaggtaggattaagagatggtggaaccgccgggcatggtggcacaggac
tttaatcccagcacttgggaggcagaggcaggcagatttctgagttcgag
gccagcctggtctacaaagtgagttccaggacagccagggctatacagag
aaaccctgtctcggaaaaaaaaaaaaaaaaagagagagagagagagagag
agatggtggaacctttagcaggtagggcctaagtgtgggaaggaaggtca
ttgagagccccaacctcaaaagggatgaatgctagtctctaggaaggtgt
gagtgcctacaaaaatgggttgtgatggggctagagagatggatggttta
gtggttaagtaactgcagaagactcagtttcccttcccaacaaccacatg
gtagctcaccaccatccatagctccagttccatggagtctgcccacccca
cctccccctttaacctccaagggctgtaggcatgcacttagtgcacaaac
atatatacaggggaaacacatatacaaaataaaaacaattacatctcttt
agaaatacaaacaaacaaaacaggctgttagaagaaagagtaaaactaaa
ttttcagaaatgactccaacttctcttttctactacacagagcagtgagc
atctttaccagtgcccaaactcatgggaccacacaatcttggacttccaa
aagttctagagtaaataaccctcttt
gaattctatcccaggtggttcctgttagaccttttgtgtttgcattcctc
tgttttatgtaagattccagttacctcatttgtaccttgcgaatatgtca
cccaacttcctaattgtcttctgcataaaaagtctgatgctcgatttgaa
aaatacattcagattccacacgacctctcctgtgtgcgtctgtctgtcaa
ttcatcctacgctttgtccacccgcgactagagacctgttccacacagac
aaaggggcccagagggtctgtggcagtatctgaaatcaattaaatcccaa
gcagctgagcataactgtgaggaattttcttgcctgggtcatatgaggtg
ggaagtcccactctaagtctgggccacactttctggtggtagcccacata
aaagagtgtggaaaagggaaacttgcttttttttctgcttgccatcactc
tcaattgcaaattcatctaactgagaatacttgttttgcttgtattagaa
cctactccttggggattccaaggtagactaaagaccaactgagacattca
gccttctagattgaacagttacttaattcttggtcattcctttgagagaa
agatgttgttgaactagccataccacagcatgtaaactactctaacaaat
cctttttttattattattttttgttggatattttatttatttacatttca
gatattatcccctttcctggttttccctttgtaaactccctcccctccct
ctgcgtctatgagggggatcctccactcacccacccactcccacctcacc
accctagcattctcctatactggggcatcaagccttcacaggaccatggg
cctctcctcccattgatgccagataaggccatcctctgcttcatatgtag
ctggagccatgggtccactttggttggtggtttagtccttgggagctctg
gggggtctggttggtgctatattgtcttcctttggagtgcaaacccttcg
ctcttcagtccttgccctaattcctctgtggagtcctgtgctcacgttgc
ctgcaggcattcacatatatgtactggttcaggcagagccaggcatttgg
cattcgctatagcatctagctgagttctacattggaacgaatcccagtag
gtcagatccctggtaatgcgcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_71089334_71090203
seq2: B6Ng01-265O05.b_45_920

seq1  GAATTCATTGAAACACATTGTGTGGCATCTAAGTTAAAGCTCAGAACTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTGAAACACATTGTGTGGCATCTAAGTTAAAGCTCAGAACTTC  50

seq1  TGTAGGATGCTCTGATTCTCATTGAGCCCATATGGTTCCTTTTGGTCTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGATGCTCTGATTCTCATTGAGCCCATATGGTTCCTTTTGGTCTAG  100

seq1  AGGCTTATAACCTAAAAGTAAATTGTCAGTACCCTCAGCCCTCACTGTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCTTATAACCTAAAAGTAAATTGTCAGTACCCTCAGCCCTCACTGTAT  150

seq1  TTAGGTAGGATTAAGAGATGGTGGAACCGCCGGGCATGGTGGCACAGGAC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTAGGATTAAGAGATGGTGGAACCGCCGGGCATGGTGGCACAGGAC  200

seq1  TTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATCCCAGCACTTGGGAGGCAGAGGCAGGCAGATTTCTGAGTTCGAG  250

seq1  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGCCTGGTCTACAAAGTGAGTTCCAGGACAGCCAGGGCTATACAGAG  300

seq1  AAACCCTGTCTCGGAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTGTCTCGGAAAAAAAAAAAAAAAAAGAGAGAGAGAGAGAGAGAG  350

seq1  AGATGGTGGAACCTTTAGCAGGTAGGGCCTAAGTGTGGGAAGGAAGGTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGGTGGAACCTTTAGCAGGTAGGGCCTAAGTGTGGGAAGGAAGGTCA  400

seq1  TTGAGAGCCCCAACCTCAAAAGGGATGAATGCTAGTCTCTAGGAAGGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGAGCCCCAACCTCAAAAGGGATGAATGCTAGTCTCTAGGAAGGTGT  450

seq1  GAGTGCCTACAAAAATGGGTTGTGATGGGGCTAGAGAGATGGATGGTTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGCCTACAAAAATGGGTTGTGATGGGGCTAGAGAGATGGATGGTTTA  500

seq1  GTGGTTAAGTAACTGCAGAAGACTCAGTTTCCCTTCCCAACAACCACATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTTAAGTAACTGCAGAAGACTCAGTTTCCCTTCCCAACAACCACATG  550

seq1  GTAGCTCACCACCATCCATAGCTCCAGTTCCATGGAGTCTGCCCACCCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTCACCACCATCCATAGCTCCAGTTCCATGGAGTCTGCCCACCCCA  600

seq1  CCTCCCCCTTTAACCTCCAAGGGCTGTAGGCATGCACTTAGTGCACAAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCCCTTTAACCTCCAAGGGCTGTAGGCATGCACTTAGTGCACAAAC  650

seq1  ATATATACAGGGGAAACACATATACAAA--TAAAACAATTACATCTCTTT  698
      ||||||||||||||||||||||||||||   |||||||||||||||||||
seq2  ATATATACAGGGGAAACACATATACAAAATAAAAACAATTACATCTCTTT  700

seq1  AGAAATACAAACAAACAAAACAGGCTGTTAGAAG-AAGAGTAAAACTAAA  747
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGAAATACAAACAAACAAAACAGGCTGTTAGAAGAAAGAGTAAAACTAAA  750

seq1  -TTTCAG-AATGACTCCAACTTCTCTTTTCTACTACACAGAGCAGTGAGC  795
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCAGAAATGACTCCAACTTCTCTTTTCTACTACACAGAGCAGTGAGC  800

seq1  ATCTTTACCAGTGCCCAAACTCATGGGACCACACAATCTTGGACTTTCAA  845
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  ATCTTTACCAGTGCCCAAACTCATGGGACCACACAATCTTGGACTTCCAA  850

seq1  AAG-TCTAGAGTAAATAAACCTCTTT  870
      ||| |||||||||||||| |||||||
seq2  AAGTTCTAGAGTAAATAACCCTCTTT  876