BAC Information

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BAC

Clone NameB6Ng01-267N24
Chromosome7 (Build37)
Map Location 61,005,231 - 61,006,385
singlet/doubletsinglet
Overlap genenone
Upstream geneEG620782, LOC100040692, Gm1865, LOC100040718
Downstream geneLOC668789, Mrps33p, LOC622146
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-267N24.bB6Ng01-267N24.g
ACCGA070882GA070883
length1,1421,179
definitionB6Ng01-267N24.b B6Ng01-267N24.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttcatgagaattcatttaatatcttccatgataatttggattag
gaattttttttctccagagtatacatataaaatcttagctcaggcatcta
gtggtttgcccagaattacacagataacaggagccagggtttgcacctgc
atttgtgcccgtttcaactgcagcataaaccaacagttgactaaaaagga
gctgatctgaaatggtatatttctgagtatggtttatcttattttctctt
acttttttcaagaagcaaattagtctgcctcactcaacctctcctcttgc
ttgaaaatttagccttatataaaaccaataaataattcataatctatgat
catttctgtgtgtttgcaattagttttatgctgtccaagcatatcatgtc
tcaaatacttgaagtataatggcaagttacaaatcaccttttatactttc
ccaaatgtatgtttcattttcagtgaaagatatccatacagtatttctag
gactctgttcatttctgtgttctcacagtgaggacttctggaactcctga
agatcagacatggaaatgcagaggcaacgatgtaggaacactgatgagca
gcactcagtgcccgttattcatttccacagacatttccttttctcactct
acagtcattctttacccccacactcaaaaagcctggaagttaacttttca
catgaatgttgcttctgtagagttaaatgacaatatacaatgatcctcct
tcacactgacaaactgacatctcatcaaacagccaaatgttctcatcata
ttgtgcagaaaccaaagccaatatttcacattcaaatacacataagggta
gcaatgctgagtaaagataatgatgaccaaatacttgctgctcaaatgca
cttcatgaatcagaaattactgaactattatgtaatgtttaacaatccac
atcatttgtaggctgaacaatgtagttaaagcatagtctatttagattcc
atgtacatctggatcatggccatgcttgtctatatctggtcttgttttct
gacaatttttcttagtgtctgagtatagacatactcaattcctctttgta
agaaatatactactcaactatgttgcagaagacgatgaatta

gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcccc
tatctgatttaggatagataaagttcctttcccaatctgttgttggcatt
tttgtcttattgacggtgtcttttgccttacagaagctttgaaattttat
gaggtcctatttgtagattctcgatcttatggcacaagccattgctgttc
tattcaggaatttttcccctgtgcccatatcttcgaggcttttccccact
ttctcctctataagtttcactgtctctggttttatgtggagttccttgat
ctacttagatttgacataagtacaaggagataggaatggataaatttgca
cttctacatgataaccgcccattgtgccagcaccatttgttaaaaatgtt
gtcttttttccactggatggtattagctcccttgtcaaagagcaagtgac
cataggtgtgtgggcatctctttctttaaggtttgggaagtttgctgcta
ttattttgttgaagatatttgctggccctttacgttgaaaatcttcattc
tcatctactcctattattcataagtttggtcttctcattttgtcctggat
gttttgatttaggatccttttgcattttgcattttctctgattgttgtac
caatgttctctatgggatcttctgcacctgagattctctcttccttctct
tgtattctgttgcagatgctcgcatctatatttccagatttctttcctag
ggtttctatttccagcattgcctcactttggggttttctttattgtgtct
acttctctttttaggtctagtattgttttgtcatttccatcacctgttgg
atgtgttttcctgtttttctttaaggacttctacctgttggttttgtttt
ccgttttctttaaggacttttaactctttagctgtgttctaatgatttct
ttaagtgagttattaaggtcctcctggatgtcctctaactccatcatgga
gaatatggcatttaagatcagtctatcttttcaggtgtcttagggatgcc
catgtacctggaccgagttgtagtgcctgatccgatgatgcgtagtgctc
tcggttttctgctattaagaactctctgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61005231_61006385
seq2: B6Ng01-267N24.b_51_1192 (reverse)

seq1  TAATTCATCTGTCTTCTTGCCACACATTAGTGGAGTAGTAATATTTC-TA  49
      ||||||||| |||||| ||| |||   |||| ||||||| ||||||| ||
seq2  TAATTCATC-GTCTTC-TGCAACA---TAGTTGAGTAGT-ATATTTCTTA  44

seq1  CAAAGAGGAAATTGAGTATGTTCTTATACTCCAAGACACT-AGAAAA--T  96
      |||||||| ||||||||||||   |||||||  ||||||| ||||||  |
seq2  CAAAGAGG-AATTGAGTATGT--CTATACTC--AGACACTAAGAAAAATT  89

seq1  GTCAAGAAACAAAGACCAGATATAGACCAAGCATGGCCATGATCCAAGAT  146
      ||| |||||  ||||||||||||||| |||||||||||||||||| ||||
seq2  GTC-AGAAAACAAGACCAGATATAGA-CAAGCATGGCCATGATCC-AGAT  136

seq1  GTTACATGGAATCCTAAATAGACTATGCTTTAACCTACATTGTTCAGCCT  196
      | |||||||||| |||||||||||||||||||| ||||||||||||||||
seq2  G-TACATGGAAT-CTAAATAGACTATGCTTTAA-CTACATTGTTCAGCCT  183

seq1  ACAAATGATGTGGATTGTTAAACATTACATAATAGTTCAGTAATTTCTGA  246
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAATGATGTGGATTGTTAAACATTACATAATAGTTCAGTAATTTCTGA  233

seq1  TTCATGAAGTGCATTTGAGCAGCAAGTATTTGGTCATCATTATCTTTACT  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATGAAGTGCATTTGAGCAGCAAGTATTTGGTCATCATTATCTTTACT  283

seq1  CAGCATTGCTACCCTTATGTGTATTTGAATGTGAAATATTGGCTTTGGTT  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTGCTACCCTTATGTGTATTTGAATGTGAAATATTGGCTTTGGTT  333

seq1  TCTGCACAATATGATGAGAACATTTGGCTGTTTGATGAGATGTCAGTTTG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCACAATATGATGAGAACATTTGGCTGTTTGATGAGATGTCAGTTTG  383

seq1  TCAGTGTGAAGGAGGATCATTGTATATTGTCATTTAACTCTACAGAAGCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTGAAGGAGGATCATTGTATATTGTCATTTAACTCTACAGAAGCA  433

seq1  ACATTCATGTGAAAAGTTAACTTCCAGGCTTTTTGAGTGTGGGGGTAAAG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTCATGTGAAAAGTTAACTTCCAGGCTTTTTGAGTGTGGGGGTAAAG  483

seq1  AATGACTGTAGAGTGAGAAAAGGAAATGTCTGTGGAAATGAATAACGGGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTGTAGAGTGAGAAAAGGAAATGTCTGTGGAAATGAATAACGGGC  533

seq1  ACTGAGTGCTGCTCATCAGTGTTCCTACATCGTTGCCTCTGCATTTCCAT  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGTGCTGCTCATCAGTGTTCCTACATCGTTGCCTCTGCATTTCCAT  583

seq1  GTCTGATCTTCAGGAGTTCCAGAAGTCCTCACTGTGAGAACACAGAAATG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGATCTTCAGGAGTTCCAGAAGTCCTCACTGTGAGAACACAGAAATG  633

seq1  AACAGAGTCCTAGAAATACTGTATGGATATCTTTCACTGAAAATGAAACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGAGTCCTAGAAATACTGTATGGATATCTTTCACTGAAAATGAAACA  683

seq1  TACATTTGGGAAAGTATAAAAGGTGATTTGTAACTTGCCATTATACTTCA  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTGGGAAAGTATAAAAGGTGATTTGTAACTTGCCATTATACTTCA  733

seq1  AGTATTTGAGACATGATATGCTTGGACAGCATAAAACTAATTGCAAACAC  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGAGACATGATATGCTTGGACAGCATAAAACTAATTGCAAACAC  783

seq1  ACAGAAATGATCATAGATTATGAATTATTTATTGGTTTTATATAAGGCTA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGAAATGATCATAGATTATGAATTATTTATTGGTTTTATATAAGGCTA  833

seq1  AATTTTCAAGCAAGAGGAGAGGTTGAGTGAGGCAGACTAATTTGCTTCTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTTCAAGCAAGAGGAGAGGTTGAGTGAGGCAGACTAATTTGCTTCTT  883

seq1  GAAAAAAGTAAGAGAAAATAAGATAAACCATACTCAGAAATATACCATTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAAAGTAAGAGAAAATAAGATAAACCATACTCAGAAATATACCATTT  933

seq1  CAGATCAGCTCCTTTTTAGTCAACTGTTGGTTTATGCTGCAGTTGAAACG  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATCAGCTCCTTTTTAGTCAACTGTTGGTTTATGCTGCAGTTGAAACG  983

seq1  GGCACAAATGCAGGTGCAAACCCTGGCTCCTGTTATCTGTGTAATTCTGG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACAAATGCAGGTGCAAACCCTGGCTCCTGTTATCTGTGTAATTCTGG  1033

seq1  GCAAACCACTAGATGCCTGAGCTAAGATTTTATATGTATACTCTGGAGAA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAACCACTAGATGCCTGAGCTAAGATTTTATATGTATACTCTGGAGAA  1083

seq1  AAAAAATTCCTAATCCAAATTATCATGGAAGATATTAAATGAATTCTCAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATTCCTAATCCAAATTATCATGGAAGATATTAAATGAATTCTCAT  1133

seq1  GAAGAATTC  1155
      |||||||||
seq2  GAAGAATTC  1142


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