BAC Information

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BAC

Clone NameB6Ng01-269E18
Chromosome7 (Build37)
Map Location 21,994,637 - 21,995,701
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100043536, LOC100042968, LOC100042971, EG667129, EG667135, EG435946, LOC100042976, LOC100043550, LOC667156, LOC673977, LOC667166, LOC100042980, EG381936, LOC100043559, LOC667311, LOC100043561, LOC667302, EG667292, LOC100043566, LOC100043569, EG436135, LOC100042996, EG667273, EG667268, EG667262, EG667259, LOC100043574, LOC100043576, Gm1447, LOC100043006, LOC100043583, EG435953, LOC673902, EG667240, EG435951, Gm1446, LOC381937
Downstream geneLOC100043588, LOC670764, EG667215, LOC100043013, LOC621561, EG667199, EG621510, LOC667186, EG628475, LOC100043595, LOC100043596, LOC667358, LOC100043016, LOC100043602, LOC100043604, EG667378, LOC100043607, LOC100043019, LOC100043025, EG667404, EG435940, LOC100043026, EG545929, LOC667421, LOC100043614, LOC667431, LOC100043029, EG620736, EG667444, LOC100043033, LOC100043037, EG667464, EG667469, EG667472
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-269E18.bB6Ng01-269E18.g
ACCGA071933GA071934
length5891,060
definitionB6Ng01-269E18.b B6Ng01-269E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
aaaattgacatgattgatttttatgtaaaagtttagatttgtgattcctt
taagcttttttcagattattttagagataaataataaaattcttgtccct
ttctttgtaatttctgccttccaagaagagaaacttgatgagaaaactgc
cttgcttgtgtacactttgtgaatttataataagttccttacttataaat
gtacctaggttatatgccagcaagattttgatgaagggactctggtatat
ctgtctcgtatgaggctatgccagtgcctggcaaatacagatgtggatgc
tcacagtcatctgtaagatggaacacagggcccccaatggagaagctaga
gaaagcacccaaggagctgaaggggtctgcaaccctattggtggaacaac
aatatgaactaaccagtacccccagagcttatatctctagctgcatatgt
agcagaagatggcctagtcagccatcactgggaagggaggcccctggtat
tgcaaactttttatgtcccagtacacaggaatgccagggtcaagaagcag
gagtgggttggtaggggagcagggcatggggggagggta
gaattcaattcctggggccaacacacagaaggagagcactgactcctgga
aattactatctcttacacactgaataaagaaataaaagttttttttaaaa
taaataaatatttgtagaatgtgtggaatcagaacagtggagaaagtgta
gtcatacttcctagacctgtgttaacttgtgggtcttgaccccttgggga
ggttgaatgacctatccacaggggtcagatatcaaatatccagcccacca
gatacttacatgatcatgaataacagtagtaaagttgcagctatgaagta
ggaatgaaaatcatgttatggttgggggtcaccacaacatgaagaactgc
atgagaggacagcaacatcactaaggttgagaacactgatctagattctt
aacccaggattcagcgttctagaatcaactggcatctgtaaccatcactg
aggacccgttcccacctgcagctgtcccctgacatcagccaagggttcgg
agtacccttggtgactgcgactcctctcatcatgcaccacacaggaaaaa
tgatggtctgctcagtagactcaaaggagaaaaacagaaaagatgtaaca
tctctctatactcccaggtttttgtactcctaagtctttgtaaactagaa
aatgattcaataaagagaggtccaaaagcaaagcaccaaaaatctcatgc
tgaagaagagatcatttaaaatgataccttttctgttttgtgtactcgtg
tgcatgcgtgcatgtgtgtgcgtgcatccccatgtctaggtgtggcagtc
agagtacagcttaggagaatcagtgagtccccagagtcagactcaggctc
tcaggctttgcagcaatgttttctttgggggacaacaatgacacactggg
accagactggacagggcacagggtggagttctagcttcatgatggagcag
ttgggtggagatgctcacggaacatgctagtagtgttccacacccaggca
gcatgctttaaaacaaatataagttgatataaaaactgacatcttcccat
atatgtataa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_21994637_21995701
seq2: B6Ng01-269E18.g_64_1123

seq1  GAATTCAATTCCTGGGGCCAACACACAGAAGGAGAGCACTGACTCCTGGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCTGGGGCCAACACACAGAAGGAGAGCACTGACTCCTGGA  50

seq1  AATTACTATCTCTTACACACTGAATAAAGAAATAAAAGTTTTTTTTAAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTATCTCTTACACACTGAATAAAGAAATAAAAGTTTTTTTTAAAA  100

seq1  TAAATAAATATTTGTAGAATGTGTGGAATCAGAACAGTGGAGAAAGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAAATATTTGTAGAATGTGTGGAATCAGAACAGTGGAGAAAGTGTA  150

seq1  GTCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATACTTCCTAGACCTGTGTTAACTTGTGGGTCTTGACCCCTTGGGGA  200

seq1  GGTTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCACCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTGAATGACCTATCCACAGGGGTCAGATATCAAATATCCAGCCCACCA  250

seq1  GATACTTACATGATCATGAATAACAGTAGTAAAGTTGCAGCTATGAAGTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATACTTACATGATCATGAATAACAGTAGTAAAGTTGCAGCTATGAAGTA  300

seq1  GGAATGAAAATCATGTTATGGTTGGGGGTCACCACAACATGAAGAACTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGAAAATCATGTTATGGTTGGGGGTCACCACAACATGAAGAACTGC  350

seq1  ATGAGAGGACAGCAACATCACTAAGGTTGAGAACACTGATCTAGATTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGAGGACAGCAACATCACTAAGGTTGAGAACACTGATCTAGATTCTT  400

seq1  AACCCAGGATTCAGCGTTCTAGAATCAACTGGCATCTGTAACCATCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCAGGATTCAGCGTTCTAGAATCAACTGGCATCTGTAACCATCACTG  450

seq1  AGGACCCGTTCCCACCTGCAGCTGTCCCCTGACATCAGCCAAGGGTTCGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACCCGTTCCCACCTGCAGCTGTCCCCTGACATCAGCCAAGGGTTCGG  500

seq1  AGTACCCTTGGTGACTGCGACTCCTCTCATCATGCACCACACAGGAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACCCTTGGTGACTGCGACTCCTCTCATCATGCACCACACAGGAAAAA  550

seq1  TGATGGTCTGCTCAGTAGACTCAAAGGAGAAAAACAGAAAAGATGTAACA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGGTCTGCTCAGTAGACTCAAAGGAGAAAAACAGAAAAGATGTAACA  600

seq1  TCTCTCTATACTCCCAGGTTTTTGTACTCCTAAGTCTTTGTAAACTAGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCTATACTCCCAGGTTTTTGTACTCCTAAGTCTTTGTAAACTAGAA  650

seq1  AATGATTCAATAAAGAGAGGTCCAAAAGCAAAGCACCAAAAATCTCATGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTCAATAAAGAGAGGTCCAAAAGCAAAGCACCAAAAATCTCATGC  700

seq1  TGAAGAAGAGATCATTTAAAATGATACCTTTTCTGTTTTGTGTACTCGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAAGAGATCATTTAAAATGATACCTTTTCTGTTTTGTGTACTCGTG  750

seq1  TGCATGCGTGCATGTGTGTGCGTGCATCCCCATGTCTAGGTGTGGCAGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATGCGTGCATGTGTGTGCGTGCATCCCCATGTCTAGGTGTGGCAGTC  800

seq1  AGAGTACAGCTTAGGAGAATCAGTGAGTCCCCAGAGTCAGACTCAGGCTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTACAGCTTAGGAGAATCAGTGAGTCCCCAGAGTCAGACTCAGGCTC  850

seq1  TCAGGCTTTGCAGCAATGTTTTCTTTGGGGGACAACAATGACAACACT-G  899
      |||||||||||||||||||||||||||||||||||||||||| ||||| |
seq2  TCAGGCTTTGCAGCAATGTTTTCTTTGGGGGACAACAATGAC-ACACTGG  899

seq1  GACCAGACTGGACAGGGCACAGGGTGGAGTTCTAGCTTCATGATGGAGCA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGACTGGACAGGGCACAGGGTGGAGTTCTAGCTTCATGATGGAGCA  949

seq1  GTTGGGT-GAGATGCTCACGGAACATGCTAGTAGTGTTCCACACCCAGCC  998
      ||||||| |||||||||||||||||||||||||||||||||||||||| |
seq2  GTTGGGTGGAGATGCTCACGGAACATGCTAGTAGTGTTCCACACCCAGGC  999

seq1  AGCCATGCTTTAAAACAAATTATAAAGTTGATATAAAAACTTGACAATCT  1048
      || |||||||||||||||| ||| |||||||||||||||| |||| ||||
seq2  AG-CATGCTTTAAAACAAA-TAT-AAGTTGATATAAAAAC-TGAC-ATCT  1044

seq1  TCCCATAATATGTATAA  1065
      |||||| ||||||||||
seq2  TCCCAT-ATATGTATAA  1060