BAC Information

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BAC

Clone NameB6Ng01-270B13
Chromosome7 (Build37)
Map Location 19,584,970 - 19,585,437
singlet/doubletsinglet
Overlap geneP42pop
Upstream geneCeacam13, LOC384560, Ceacam12, Igfl3, LOC671190, Mill1, Psg18, LOC546936, Psg28, LOC666831, EG574429, EG232930, Psg25, EG545925, Psg23, Psg21, EG434540, BC050099, LOC666863, Sycp1-ps1, Psg19, Psg17, Mill2, Pglyrp1, C530028I08Rik, Nova2, Nanos2
Downstream geneIrf2bp1, Foxa3, Sympk, Rshl1, Dmwd, Dmpk, Six5, EG243866, Fbxo46, Qpctl, Snrpd2, Gipr, Eml2, Gpr4, Opa3, Vasp, C79127, Rtn2, Fosb, D830036C21Rik, Ercc1, Cd3eap, Ppp1r13l, Ercc2, Klc3, Ckm, Mark4, 4933417E01Rik, Bloc1s3, Trappc6a, Nkpd1, BC024868, Gemin7, Zfp296, Sfrs16, Relb, Clptm1, Apoc2, Apoc4, Apoc1, Apoe, Tomm40, Pvrl2, Bcam, Cblc, Bcl3, Ceacam16, Ceacam19, Pvr, 2210010C17Rik, EG243872, Ceacam20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270B13.bB6Ng01-270B13.g
ACCGA072527GA072528
length1,213462
definitionB6Ng01-270B13.b B6Ng01-270B13.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaagtgtctctgcccactgccctctaggttctggttccaggcgca
cagccctgcctggcttctgaggtgggcgctggggatctgagctcaggtcg
gcatgtttgcagagcaggcattttgccaactaaaccagcagttcccaacc
tgcgggtcacagccccttggggtcttataacagatatcctgcttatcaga
tatttacattatgattcataacagtaacaaaattagagttatgaagtagc
aaggaaatcatttcatggttgggggtcaccacaacatgacgaactgtatt
aaagggtctcagcattaggaaccactggactaagccatcttcctatagtg
ttcttgttattattattattttttaaattttaaagtctgtgtgtctatgt
gtatgtgcagagctaaaggagttggaggctaggaaagggtgttggaggcc
aggaaagggtgtcagattccctggagctacagtcacagatggttgtgagt
cacttgacatgggagatgggaaccaaagtcaggccctttgcaagagcagc
aagcgctcttaatgtttgagccatccctccagccggtccgagtcatgtca
aagactaggaaggaagctcaggcagggacgggctaggcagggctaggcag
cagcctttgctcacactgaactgaggcaattctgtccagattacccatgc
ttgctgggcatggattacaccactcagttgtccgagccatcacagtcact
gctggctgcctaaactactgtcccccacctacctccaggactcacccttt
atctccttcaggtttggctcagaaattgcctctaggaagcctttgatcca
agcccatagcttctacccaacagaacacaaactctcaaccctcattagtt
tttctccttagcatgtatcgcactgcccactgtactaaccattttgctta
ttaagtgtgccgtctgcctctccttattgacgtgaaagcttgaaggcaga
catttccctgtgtctcactgtgtagtacagcttgctcaaactggggaacc
tcctgctcagtctctcaggacggcaaatgacagatgtgcactacatggct
agcttggctgggcatgccatgtcggttcatgtctggagtttggctctgag
accgttaccacgccatcagcccttgggggaccaaggcccacacagggttt
ctcatgagggttc
ctatctctgccagatgtcccgcctcttctcccctcctttgctgtaagccc
ttagtttttttcttaaaccaataggaaggtgagagagggagagcttacaa
aataggatgcaggtgatgagcaattagacaggatgtcgggcctgtaaatc
agatgcccgcctggtacagatatcagcagatgaatagtacaccaccagtc
tttacacagtgcataaaaggatcacccccaacacagtttaatgcatccgc
tcctcggcattcaaagactgacttcatgagcgttccctggcatgttctat
ctaggtggtattactagtgtgttcctttttgagatatggtcttgctttat
agcctaggttcgcctgcagctccagaatacaagtatttcaaacaaatgcc
tcgatagtggcctagcgtgtgtgtctgtgtgtgtgtgtgtgtgtgtgtgt
gtgtgtgtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_19584970_19585437
seq2: B6Ng01-270B13.g_68_535

seq1  GAATTCCTATCTCTGCCAGATGTCCCGCCTCTTCTCCCCTCCTTTGCTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTATCTCTGCCAGATGTCCCGCCTCTTCTCCCCTCCTTTGCTGT  50

seq1  AAGCCCTTAGTTTTTTTCTTAAACCAATAGGAAGGTGAGAGAGGGAGAGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTTAGTTTTTTTCTTAAACCAATAGGAAGGTGAGAGAGGGAGAGC  100

seq1  TTACAAAATAGGATGCAGGTGATGAGCAATTAGACAGGATGTCGGGCCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACAAAATAGGATGCAGGTGATGAGCAATTAGACAGGATGTCGGGCCTG  150

seq1  TAAATCAGATGCCCGCCTGGTACAGATATCAGCAGATGAATAGTACACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATCAGATGCCCGCCTGGTACAGATATCAGCAGATGAATAGTACACCA  200

seq1  CCAGTCTTTACACAGTGCATAAAAGGATCACCCCCAACACAGTTTAATGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTCTTTACACAGTGCATAAAAGGATCACCCCCAACACAGTTTAATGC  250

seq1  ATCCGCTCCTCGGCATTCAAAGACTGACTTCATGAGCGTTCCCTGGCATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCGCTCCTCGGCATTCAAAGACTGACTTCATGAGCGTTCCCTGGCATG  300

seq1  TTCTATCTAGGTGGTATTACTAGTGTGTTCCTTTTTGAGATATGGTCTTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCTAGGTGGTATTACTAGTGTGTTCCTTTTTGAGATATGGTCTTG  350

seq1  CTTTATAGCCTAGGTTCGCCTGCAGCTCCAGAATACAAGTATTTCAAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATAGCCTAGGTTCGCCTGCAGCTCCAGAATACAAGTATTTCAAACA  400

seq1  AATGCCTCGATAGTGGCCTAGCGTGTGTGTCTGTGTGTGTGTGTGTGTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCCTCGATAGTGGCCTAGCGTGTGTGTCTGTGTGTGTGTGTGTGTGT  450

seq1  GTGTGTGTGTGTGTGTGT  468
      ||||||||||||||||||
seq2  GTGTGTGTGTGTGTGTGT  468