BAC Information

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BAC

Clone NameB6Ng01-270J17
Chromosome7 (Build37)
Map Location 9,717,823 - 9,718,912
singlet/doubletsinglet
Overlap geneEG665582
Upstream geneLOC100041989, LOC100041998, LOC100042009, LOC100042754, V2r14, EG628128, EG434109, LOC434110, EG628145, EG545909, LOC100042039, LOC100042781, LOC665539, LOC100042795, LOC100042060, EG665552, LOC100042790, LOC100042803, LOC665598, LOC100042810, LOC665593
Downstream geneEG434113, EG665577, LOC665571, LOC100042083, Gm1961, V2r4, LOC100042848, LOC100042096, LOC100042870, LOC100042105, LOC100042859, LOC100042113, LOC100042120, LOC100042126, LOC100042139, LOC100042894, Vmn2r47, 2810047C21Rik, LOC665625, LOC545911, EG625580, LOC100042163, LOC625605, EG434117, EG628152, LOC100042921
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-270J17.bB6Ng01-270J17.g
ACCGA072903GA072904
length1,0811,094
definitionB6Ng01-270J17.b B6Ng01-270J17.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccttttacagtttgacattaatagtttataggtgcttcttcttat
gtttgttcacatgcaaatgtggaataaataatttgtatcagtagttccag
atattctgattatcgaattgacagtttgaattatattttcaaaaataaag
tattctttttactaaactgggaaaaactctcactcaattgtctatcacta
actcatgcttcattcactactattcaaatgaggtatgaagtaggatttcg
tggtcttttcacctagctcaatttcatatgtctagttaccaaaatgtgtt
atgaaaattttgttctattatgatggattagatttgtttaaacttgtttt
attttattctcccatagaatcctgtcatcttctaatgagtgacattaagt
ggatctgatgaaaaaggaaggaaataggcatattaactatgatatatttg
ccagtagaactgacaattgttcacatcccaatagaaggaatggaaactgt
aattaggatgtattatgtgagaataacaagttattttcaataaataaaac
aatcaaaattaaaaaaaaaaaactccgtgttctcagagaatgatctttct
gtttggtgttgtgttcttttggtaggtgtttttgtcaagaattattccac
acatatccatcaaatgtattgtttttgaatgacctttttccctcttatta
aacattatgatgtttttatccattttttaataaagaaaagttctcctctt
gtatatgaatgtgttttcctactctctgcaaacaacttaggaatgtctta
aaaaataaaccagtttttttttatttgatttcatttagagaatgtgaaca
caaaagttcaattataactgaaaattacttgttgcttttgtctggttgct
gttattgctgtacttgaggtgtgttaatagcctttattttttctgtgttc
tagtgctgtctataggtcctttgaccttcttgtcatctatgtaaagagtg
gagtggattcttcaatttactaaaagtgatgttctataatatgattttct
gtatgtgtcaatagtgaatgtgtcgagtgtc
gaattcagaactcttcagctggggaacggtggtaatgaagtgttcccgca
acacagactgttgagaaggattcaattgcgtgaattcagaactcttcagc
tggggaacagggtacccgtaagtatagctttacaaggtaagtctggcctt
gaactttctaacgaaattcaagacagtctatcagaagtaaagtgggaaat
agctttacaaggtatgtttgaccttgaacgttttctagtgttagaagccc
ttttgttccttttcacatgttatcaagtggttaaggcagggctgaaaatt
ctggatgaaattcaggacaatctatcagaagtaaagcggggagagagagt
aggagcaaagaggaaacatggcgcacaaaataagtatacaggcctttcca
cgggtcttgaacccgaggaaaagtttaggtcaggtaagaatacctaggga
gagattagaaggaaggaaaagaaaaaagaaaagaaaaaagatcaattagc
ggaggtctctaggagaaggagtctatactcatcactaggtgagctcaagg
agccagttcttaatagttctgaatcagatgaaaaggctattagggcctgg
aaggcgctctcccacgcaggtgaaaccactggacaactaataaagatcgt
ccagagacctcaggagtcattctcagattttgtggccagaatgacagagg
cagcagagcgtatttttgcagattcggagcaagccgcacctctggtagaa
tagcttatttatgagcaagccatgcaggaatgcagagcggccatagcctc
aagaaagaacaaaggtttacaagactggctcagggtttgtcgggagcttg
ggggacctctcattatgcgttacttccattcagtatgagaaatttactag
ggcagctaatttgtcaaaaagtctttctcagtatatgttacagaattggg
acggctgatttgaacagacccttctgggaattgagactggccattattca
ggtcaactccacgcgcttgactgtcctgacaatatactcatggatctctc
agcattttcttctttaagatgggttatgggggtgggaattattg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_9717823_9718912
seq2: B6Ng01-270J17.b_43_1123 (reverse)

seq1  GACACTCGACACATTCACTAATGAACACAATTACAGAAAATCATATTAAT  50
      |||||||||||||||||||| || |||||  |||||||||||||||| ||
seq2  GACACTCGACACATTCACTATTG-ACACA--TACAGAAAATCATATT-AT  46

seq1  AGAAACATCACTTTTTAGTAAATTTGAAGAATCCACT-CACTCTTTTACA  99
      || |||||||| |||||||||| |||||||||||||| ||||| ||||||
seq2  AG-AACATCAC-TTTTAGTAAA-TTGAAGAATCCACTCCACTC-TTTACA  92

seq1  TAAGATGACCAGAAGGTCAAAGGAACCTATAGACAGCACTAGAACAACAG  149
      | ||||||| ||||||||||||| ||||||||||||||||||||| ||||
seq2  T-AGATGACAAGAAGGTCAAAGG-ACCTATAGACAGCACTAGAAC-ACAG  139

seq1  AAAAAATAAAGGCTATTAACACACCTCAAGTACAGCAATAACAGCAACCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAATAAAGGCTATTAACACACCTCAAGTACAGCAATAACAGCAACCA  189

seq1  GACAAAAGCAACAAGTAATTTTCAGTTATAATTGAACTTTTGTGTTCACA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAAAGCAACAAGTAATTTTCAGTTATAATTGAACTTTTGTGTTCACA  239

seq1  TTCTCTAAATGAAATCAAAT-AAAAAAAACTGGTTTATTTTTTAAGACAT  298
      |||||||||||||||||||| |||||||||||||||||||||||||||||
seq2  TTCTCTAAATGAAATCAAATAAAAAAAAACTGGTTTATTTTTTAAGACAT  289

seq1  TCCTAAGTTGTTTGCAGAGAGTAGGAAAACACATTCATATACAAGAGGAG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAAGTTGTTTGCAGAGAGTAGGAAAACACATTCATATACAAGAGGAG  339

seq1  AACTTTTCTTTATTAAAAAATGGATAAAAACATCATAATGTTTAATAAGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTTCTTTATTAAAAAATGGATAAAAACATCATAATGTTTAATAAGA  389

seq1  GGGAAAAAGGTCATTCAAAAACAATACATTTGATGGATATGTGTGGAATA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAAGGTCATTCAAAAACAATACATTTGATGGATATGTGTGGAATA  439

seq1  ATTCTTGACAAAAACACCTACCAAAAGAACACAACACCAAACAGAAAGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTTGACAAAAACACCTACCAAAAGAACACAACACCAAACAGAAAGAT  489

seq1  CATTCTCTGAGAACACGGAGTTTTTTTTTTTTAATTTTGATTGTTTTATT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTCTGAGAACACGGAGTTTTTTTTTTTTAATTTTGATTGTTTTATT  539

seq1  TATTGAAAATAACTTGTTATTCTCACATAATACATCCTAATTACAGTTTC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGAAAATAACTTGTTATTCTCACATAATACATCCTAATTACAGTTTC  589

seq1  CATTCCTTCTATTGGGATGTGAACAATTGTCAGTTCTACTGGCAAATATA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCCTTCTATTGGGATGTGAACAATTGTCAGTTCTACTGGCAAATATA  639

seq1  TCATAGTTAATATGCCTATTTCCTTCCTTTTTCATCAGATCCACTTAATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAGTTAATATGCCTATTTCCTTCCTTTTTCATCAGATCCACTTAATG  689

seq1  TCACTCATTAGAAGATGACAGGATTCTATGGGAGAATAAAATAAAACAAG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTCATTAGAAGATGACAGGATTCTATGGGAGAATAAAATAAAACAAG  739

seq1  TTTAAACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACATT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAACAAATCTAATCCATCATAATAGAACAAAATTTTCATAACACATT  789

seq1  TTGGTAACTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTAACTAGACATATGAAATTGAGCTAGGTGAAAAGACCACGAAATCC  839

seq1  TACTTCATACCTCATTTGAATAGTAGTGAATGAAGCATGAGTTAGTGATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCATACCTCATTTGAATAGTAGTGAATGAAGCATGAGTTAGTGATA  889

seq1  GACAATTGAGTGAGAGTTTTTCCCAGTTTAGTAAAAAGAATACTTTATTT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAATTGAGTGAGAGTTTTTCCCAGTTTAGTAAAAAGAATACTTTATTT  939

seq1  TTGAAAATATAATTCAAACTGTCAATTCGATAATCAGAATATCTGGAACT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAAATATAATTCAAACTGTCAATTCGATAATCAGAATATCTGGAACT  989

seq1  ACTGATACAAATTATTTATTCCACATTTGCATGTGAACAAACATAAGAAG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGATACAAATTATTTATTCCACATTTGCATGTGAACAAACATAAGAAG  1039

seq1  AAGCACCTATAAACTATTAATGTCAAACTGTAAAAGGAATTC  1090
      ||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACCTATAAACTATTAATGTCAAACTGTAAAAGGAATTC  1081