BAC Information

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BAC

Clone NameB6Ng01-273L11
Chromosome7 (Build37)
Map Location 146,588,304 - 146,589,438
singlet/doubletsinglet
Overlap geneInpp5a
Upstream geneTcerg1l, LOC100043290, Mapk1ip1, Ppp2r2d, Bnip3, EG668784, LOC669185, 6330417G02Rik, Dpysl4, Stk32c, LOC100038956, Lrrc27, Pwwp2
Downstream geneNkx6-2, E030019B06Rik, 9330101J02Rik, LOC100043472, EG434253, EG664869, Gpr123, LOC244229, Kndc1, Utf1, LOC100039095, 6430531B16Rik, Adam8, Tubgcp2, Zfp511, Msx3, Drd1ip, Prap1, 1810014F10Rik, Echs1, Paox, Mtg1, Sprn, Olfr522, Olfr523, Olfr524, E430002D04Rik, 5830411N06Rik, EG622335, Olfr525, Olfr527, GA_x5J8B7W72BC-152913-152037, Olfr60, GA_x5J8B7W72BC-125691-125311, Olfr530, LOC622973, Olfr531
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-273L11.bB6Ng01-273L11.g
ACCGA075215GA075216
length1,2371,136
definitionB6Ng01-273L11.b B6Ng01-273L11.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctgctatatgctttttctgtttctattgaccctgtcatgatgttt
tctgccttgtgagcaattttattggctgatgtaaaccccaatcatagtgt
atacctcttcttacacattgctattgtcttcctgagaccgtctacatttt
attttcatgaagtagtatgccgttctccctttttccaatgccttggtctg
gttttgggattcaagcagtgctggccttccagggcaggtccaggtactcc
ttggtttggacctgggaactttgtagagaagattgtagtttccctcagta
gattcaccaggaagccctcctgggcctggcaggctttttcagaaggttta
ccactgacttaacttcattcacagttgtaggtatttccagctgcaaagcc
cttgtacaaatattcagattgtgatatccctacaacagttccactgtatt
actaaacttacaagcacagcttataggcacaggcttgttataatattctg
atattaccatgttatcagtagtggtccctaatcacttctcagtggtctct
tactcgtttctgttatcaatactctgtttctttctttttcggttcttggt
tcataaggctaacagttgatcactttaatagatcttctctaagaaccaat
tctctctgatttcctgtatgtaataccattcatttgcctccaatctgtac
tttttttccatttatggtgaattttgtttcctactttcctgcacctcagt
cctgggtgcactgaccacacttgcttctaattcccagtacaattgctcca
gatctctgtcatattttgagtctgtgtcagagacttggtttatctcatta
gcttgatttttatgtctttagcatgttgctgaagacagaatatgagccac
ctggatcaaagaagcaaacagatttgtggggctgaggtcacgtgccctta
tggctatagtgtcagacactcaatctccccacccctgctagcctctgctg
cttggaggattttccaggggaggcatctttctcacagagtcagaaacaac
atttatcttcaactaagtcttgcaccaggcttggtgggtcatttcactac
ctcagcagtcccaccatcccaacaaaggcaaggagggcttaagaagtctt
gagtttaagtgatcacctcttctggccagaatggaattctgaagagacct
caagtttttaagctgtggggaaacattgtgggttact
gaattccaggctagccagagccacatagtaagaccctgtcccccaaacaa
aacaaaatgtacacacaaaaggtttatttttatgtatgtgtctgtgtgta
tatgtctgactgttccacatgtgtaccgcatgggtgcagatgcccttggt
ggccataagagggaatccgatctcctgaaattggagttggaagcagttgt
gagctgcctgatatgggttctggatacttcctatgaatgggatccagcag
cccatgtcctgtatgatgctttgactctgcccatggtgcggcattgtgat
acttcattcagtttgtgacccagtgcaatatttcattgtgtgatacactg
cattttgtgtggtattgatggtacttggctgtcacagatagggctgctgt
gactatccacgcacgagcttttgtttgaacacaagtttctgttttcttgg
gtgtaaacccagctgtagtggtgctggccaaaggagcttagcttttgagg
aactgccgctgggtgctttccacagtcagactgtttcatgttctactagc
agtgacagttccagtgtttccacatccccaaacagcatttgttatggttc
atctttggtgataactgtcctggtaggtgtagagtgacatcttcctgtgg
tgtggcgtgcagctccctgatgctgagtttctccatgagcttagtgggta
tttatatgtctgcttcgaagattcagatctgcagcacattttaacttttg
tttaactgttgaattgttagaattctttatattttttggatattagaccc
ttagcagctgtgtgattcacaaattgttctctcatttggtgtattgtact
catttcttgagtgttatttgaggcaggaatgatattaacgttgatggact
cggccttgcctcctccttggttgtttgtatgcaagctgaggttacaaaga
catgtttccctcttagacttacagtcacacaaggtccggtttgcagtctt
ggtcattccagtagcattgattggaaaagactcattcccactgggccatc
taccactcaggtcggaattttaatgggacggtgactacacatcttatttt
ctcggctctctctgctggacatgtcaccctttttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_146588304_146589438
seq2: B6Ng01-273L11.g_68_1203

seq1  GAATTCCAGGCTAGCCAGAGCCACATAGTAAGACCCTGTCCCCCAAACAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGCTAGCCAGAGCCACATAGTAAGACCCTGTCCCCCAAACAA  50

seq1  AACAAAATGTACACACAAAAGGTTTATTTTTATGTATGTGTCTGTGTGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATGTACACACAAAAGGTTTATTTTTATGTATGTGTCTGTGTGTA  100

seq1  TATGTCTGACTGTTCCACATGTGTACCGCATGGGTGCAGATGCCCTTGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTCTGACTGTTCCACATGTGTACCGCATGGGTGCAGATGCCCTTGGT  150

seq1  GGCCATAAGAGGGAATCCGATCTCCTGAAATTGGAGTTGGAAGCAGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCATAAGAGGGAATCCGATCTCCTGAAATTGGAGTTGGAAGCAGTTGT  200

seq1  GAGCTGCCTGATATGGGTTCTGGATACTTCCTATGAATGGGATCCAGCAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGCCTGATATGGGTTCTGGATACTTCCTATGAATGGGATCCAGCAG  250

seq1  CCCATGTCCTGTATGATGCTTTGACTCTGCCCATGGTGCGGCATTGTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATGTCCTGTATGATGCTTTGACTCTGCCCATGGTGCGGCATTGTGAT  300

seq1  ACTTCATTCAGTTTGTGACCCAGTGCAATATTTCATTGTGTGATACACTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCATTCAGTTTGTGACCCAGTGCAATATTTCATTGTGTGATACACTG  350

seq1  CATTTTGTGTGGTATTGATGGTACTTGGCTGTCACAGATAGGGCTGCTGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTGTGTGGTATTGATGGTACTTGGCTGTCACAGATAGGGCTGCTGT  400

seq1  GACTATCCACGCACGAGCTTTTGTTTGAACACAAGTTTCTGTTTTCTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTATCCACGCACGAGCTTTTGTTTGAACACAAGTTTCTGTTTTCTTGG  450

seq1  GTGTAAACCCAGCTGTAGTGGTGCTGGCCAAAGGAGCTTAGCTTTTGAGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAACCCAGCTGTAGTGGTGCTGGCCAAAGGAGCTTAGCTTTTGAGG  500

seq1  AACTGCCGCTGGGTGCTTTCCACAGTCAGACTGTTTCATGTTCTACTAGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCGCTGGGTGCTTTCCACAGTCAGACTGTTTCATGTTCTACTAGC  550

seq1  AGTGACAGTTCCAGTGTTTCCACATCCCCAAACAGCATTTGTTATGGTTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACAGTTCCAGTGTTTCCACATCCCCAAACAGCATTTGTTATGGTTC  600

seq1  ATCTTTGGTGATAACTGTCCTGGTAGGTGTAGAGTGACATCTTCCTGTGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTTTGGTGATAACTGTCCTGGTAGGTGTAGAGTGACATCTTCCTGTGG  650

seq1  TGTGGCGTGCAGCTCCCTGATGCTGAGTTTCTCCATGAGCTTAGTGGGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGCGTGCAGCTCCCTGATGCTGAGTTTCTCCATGAGCTTAGTGGGTA  700

seq1  TTTATATGTCTGCTTCGAAGATTCAGATCTGCAGCACATTTTAACTTTTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATGTCTGCTTCGAAGATTCAGATCTGCAGCACATTTTAACTTTTG  750

seq1  TTTAACTGTTGAATTGTTAGAATTCTTTATATTTTTTGGATATTAGACCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAACTGTTGAATTGTTAGAATTCTTTATATTTTTTGGATATTAGACCC  800

seq1  TTAGCAGCTGTGTGATTCACAAATTGTTCTCTCATTTGGTGTATTGTACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGCAGCTGTGTGATTCACAAATTGTTCTCTCATTTGGTGTATTGTACT  850

seq1  CATTTCTTGAGTGTTATTTGAGGCAGGAATGATATTAACGTTGATGGACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTTGAGTGTTATTTGAGGCAGGAATGATATTAACGTTGATGGACT  900

seq1  CGGCCTTGCCTCCTCCTTGGTTGTTTGTATGCAGGCTGAGGTTACAAAGA  950
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CGGCCTTGCCTCCTCCTTGGTTGTTTGTATGCAAGCTGAGGTTACAAAGA  950

seq1  CATGTTTCCCTCTTAAGACCTACAGTCACACAAGGTCGGGGTTTGCAGTC  1000
      |||||||||||||| |||| |||||||||||||||||  |||||||||||
seq2  CATGTTTCCCTCTT-AGACTTACAGTCACACAAGGTC-CGGTTTGCAGTC  998

seq1  TT-GTCATTCCAGTAGCATTGATT-GAAAAGACTCATTCCCCACTGGGCC  1048
      || ||||||||||||||||||||| ||||||||||||| |||||||||||
seq2  TTGGTCATTCCAGTAGCATTGATTGGAAAAGACTCATT-CCCACTGGGCC  1047

seq1  ATCTTACCACTCAGGTC-GAATTTTAATTGGACGTGAACTTACACATCT-  1096
      ||| ||||||||||||| |||||||||| |||||   || ||||||||| 
seq2  ATC-TACCACTCAGGTCGGAATTTTAATGGGACGGTGAC-TACACATCTT  1095

seq1  -ATTTCTCGG--CTCTCTGCTTGACATGTCCACCCTTTTTGC  1135
        ||||||||  ||||||||| ||||||| ||||||||||||
seq2  ATTTTCTCGGCTCTCTCTGCTGGACATGT-CACCCTTTTTGC  1136