BAC Information

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BAC

Clone NameB6Ng01-274F12
Chromosome7 (Build37)
Map Location 136,277,554 - 136,278,665
singlet/doubletsinglet
Overlap geneLOC100043144
Upstream geneItgax, Itgad, Cox6a2, LOC100043133, Armc5, Tgfb1i1, Slc5a2, BC017158, EG628781, Rgs10, LOC100043643, Tial1, Bag3, EG639030, Inpp5f, LOC100043651, 1110007A13Rik, Sec23ip, LOC210714
Downstream genePpapdc1a, Brwd2, LOC100043150
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274F12.bB6Ng01-274F12.g
ACCGA075668GA075669
length1,2221,114
definitionB6Ng01-274F12.b B6Ng01-274F12.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgagaaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagataaaaaaattcaggtgacag
cagatgctggcgaggatgtggagaaagaggaacactcctccattgttggt
gggattgcaggcttgtacaaccactctggaaatcagtctggcggttcctc
agaaaattggacatagtactaccggaggatccagcaatacctctcctggg
catatatccagaagatgccccaaccggtaagaaagacacatgctccacta
tgttcatagcagccttatttataatagccagaagctggaaagaacccaga
tgcccctcaacagaggaatggatacagaaaatgtggtacatctacacaat
ggagtactactcagctattaaaaagaatgaatttatgaaattcctagcca
aatggatggacctgtagggtatcatcctgagtgaggtaacacattcgcaa
aggaactcacacaatatgtactcactgatcagtggatattagcccaaaac
ctaggatacccaagatataagatacaatttgctaaacacatgaaactcaa
gaagaatgaagactgaagtgtggacactatgcccctccatataattggga
acaaaacacccatggaaagagttacagagacaaagtttggagctgagacg
aaaggatggaccatctagagactgccatatccagggatccaccccataat
cagcttccaaacgctgacaccattgcatacactagcaagattttatcgaa
aggatccagatgtagctgtctcttgtgagactatgccggggccctagcaa
acacagaagtggatgctcacagtcagctattgggatggatcacagggctc
ccaatggaggagctagagaaagtacccaaaggagctaaagggatctgcac
cctataggtggaacaacaattatgaactaacaagtaccccgggatctctt
gactctagctgcacaatgtattcaaaagatgggctagtcgggccatcact
ggaagaagagggccaattggacatgctacctgttatatgcccaagtacag
ggtgaacgcaggctaaaaaagatggaatgagttgggtaggggcaagtgcg
gggggactaactcatgcagtca
gaattcaagtccaagtccagagcaccctgtttccctccagctaaaccctg
acgcctttttaaacgatttgactctagtgatgtagcagggtgagaagctt
agagtgagtatttatgccaggagttcactgggcccctgcaggtcaaaggt
tatgcacattgaatatgaatgaagcagtgacatttaactgagagaactca
acatgcaagacccaggagttggaaacatcacaacacaaacagaatagagc
aacaaagtcactgccactataccctagagatacttgtgacatttttaagg
tgatgattgtatgtttaattatgctggcatcgtctcagagacaatgaacc
tctttgaaatgagcctcaaagcacagtgggcactcactggcagagggaaa
ggacagaaaagactgcaaatatatttcagaaaataggacccataagaggg
catctttgtctactggccctgctttcaaagtgtctctatcatccctttcc
ccaggctggcaactagaaactttctcctctctttaataagcaaaactcat
acccaggtcgctcctttgcaactcggtaggaattaacaattcaatgtgag
ctacctctggccttgctgggcctcttaatgaatggagcatggataactgc
cccatcatccacatccagaacatgtgggcagttgccttttattctgtgaa
agctgagaaaaaaggggccagtgagcagttaaagctccaatcaacagagt
cacagcctgtggagccaggaagtagctagcatcctgcttcagctatgggc
tttcaaacaacaacaatgagagataaaaagacttgacaaagagccagcag
ggaattaagaaaacctttactgcaactagggaatcttgccacctctctct
tcttgctctcctaacaactgtataacaccttggagagatgactttgcaaa
tctagagctaccagtttgttttgagacagggttttcactgtaatataata
gcccttgggttgatctgaaactcactatgtagacaggaaaggcctcaact
cataagaagaatagataatgagcagctttgctttcaaggtactggtgata
aggcatgcttagaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_136277554_136278665
seq2: B6Ng01-274F12.g_68_1181 (reverse)

seq1  TTCTAAGCATGCCTTTAATCA-CAGTA-CTTGAAAGGCAAAGGCCTGCCT  48
      |||||||||||||||  |||| ||||| ||||||| ||||||  ||| ||
seq2  TTCTAAGCATGCCTT--ATCACCAGTACCTTGAAA-GCAAAG--CTG-CT  44

seq1  CA-TATCTA-TCT--CTATGAGTTTGAGGCCTTTCCTTGGTCTACATAGT  94
      || |||||| |||   |||||| ||||||||||||||  |||||||||||
seq2  CATTATCTATTCTTCTTATGAG-TTGAGGCCTTTCCT--GTCTACATAGT  91

seq1  GAGTTTCAGATCAACC--AAGGCTA-TATA-TACAGTG-AAACCCTGTCT  139
      ||||||||||||||||  | ||||| |||| ||||||| |||||||||||
seq2  GAGTTTCAGATCAACCCAAGGGCTATTATATTACAGTGAAAACCCTGTCT  141

seq1  CAAAACAAACTGGTAGCTCTAGATTTGCAAAGTCATCTCTCCAAGGTGTT  189
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACAAACTGGTAGCTCTAGATTTGCAAAGTCATCTCTCCAAGGTGTT  191

seq1  ATACAGTTGTTAGGAGAGCAAGAAGAGAGAGGTGGCAAGATTCCCTAGTT  239
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGTTGTTAGGAGAGCAAGAAGAGAGAGGTGGCAAGATTCCCTAGTT  241

seq1  GCAGTAAAGGTTTTCTTAATTCCCTGCTGGCTCTTTGTCAAGTCTTTTTA  289
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTAAAGGTTTTCTTAATTCCCTGCTGGCTCTTTGTCAAGTCTTTTTA  291

seq1  TCTCTCATTGTTGTTGTTTGAAAGCCCATAGCTGAAGCAGGATGCTAGCT  339
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTCATTGTTGTTGTTTGAAAGCCCATAGCTGAAGCAGGATGCTAGCT  341

seq1  ACTTCCTGGCTCCACAGGCTGTGACTCTGTTGATTGGAGCTTTAACTGCT  389
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCTGGCTCCACAGGCTGTGACTCTGTTGATTGGAGCTTTAACTGCT  391

seq1  CACTGGCCCCTTTTTTCTCAGCTTTCACAGAATAAAAGGCAACTGCCCAC  439
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGGCCCCTTTTTTCTCAGCTTTCACAGAATAAAAGGCAACTGCCCAC  441

seq1  ATGTTCTGGATGTGGATGATGGGGCAGTTATCCATGCTCCATTCATTAAG  489
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTCTGGATGTGGATGATGGGGCAGTTATCCATGCTCCATTCATTAAG  491

seq1  AGGCCCAGCAAGGCCAGAGGTAGCTCACATTGAATTGTTAATTCCTACCG  539
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGCCCAGCAAGGCCAGAGGTAGCTCACATTGAATTGTTAATTCCTACCG  541

seq1  AGTTGCAAAGGAGCGACCTGGGTATGAGTTTTGCTTATTAAAGAGAGGAG  589
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGCAAAGGAGCGACCTGGGTATGAGTTTTGCTTATTAAAGAGAGGAG  591

seq1  AAAGTTTCTAGTTGCCAGCCTGGGGAAAGGGATGATAGAGACACTTTGAA  639
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTTCTAGTTGCCAGCCTGGGGAAAGGGATGATAGAGACACTTTGAA  641

seq1  AGCAGGGCCAGTAGACAAAGATGCCCTCTTATGGGTCCTATTTTCTGAAA  689
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGGCCAGTAGACAAAGATGCCCTCTTATGGGTCCTATTTTCTGAAA  691

seq1  TATATTTGCAGTCTTTTCTGTCCTTTCCCTCTGCCAGTGAGTGCCCACTG  739
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTGCAGTCTTTTCTGTCCTTTCCCTCTGCCAGTGAGTGCCCACTG  741

seq1  TGCTTTGAGGCTCATTTCAAAGAGGTTCATTGTCTCTGAGACGATGCCAG  789
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTTGAGGCTCATTTCAAAGAGGTTCATTGTCTCTGAGACGATGCCAG  791

seq1  CATAATTAAACATACAATCATCACCTTAAAAATGTCACAAGTATCTCTAG  839
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAATTAAACATACAATCATCACCTTAAAAATGTCACAAGTATCTCTAG  841

seq1  GGTATAGTGGCAGTGACTTTGTTGCTCTATTCTGTTTGTGTTGTGATGTT  889
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATAGTGGCAGTGACTTTGTTGCTCTATTCTGTTTGTGTTGTGATGTT  891

seq1  TCCAACTCCTGGGTCTTGCATGTTGAGTTCTCTCAGTTAAATGTCACTGC  939
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAACTCCTGGGTCTTGCATGTTGAGTTCTCTCAGTTAAATGTCACTGC  941

seq1  TTCATTCATATTCAATGTGCATAACCTTTGACCTGCAGGGGCCCAGTGAA  989
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCATATTCAATGTGCATAACCTTTGACCTGCAGGGGCCCAGTGAA  991

seq1  CTCCTGGCATAAATACTCACTCTAAGCTTCTCACCCTGCTACATCACTAG  1039
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTGGCATAAATACTCACTCTAAGCTTCTCACCCTGCTACATCACTAG  1041

seq1  AGTCAAATCGTTTAAAAAGGCGTCAGGGTTTAGCTGGAGGGAAACAGGGT  1089
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCAAATCGTTTAAAAAGGCGTCAGGGTTTAGCTGGAGGGAAACAGGGT  1091

seq1  GCTCTGGACTTGGACTTGAATTC  1112
      |||||||||||||||||||||||
seq2  GCTCTGGACTTGGACTTGAATTC  1114