BAC Information

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BAC

Clone NameB6Ng01-274F24
Chromosome7 (Build37)
Map Location 150,686,892 - 150,687,918
singlet/doubletsinglet
Overlap genePhlda2
Upstream geneTnnt3, Mrpl23, Nctc1, H19, Igf2, Igf2as, Ins2, EG640264, EG624121, Th, Ascl2, Tspan32, R74862, Cd81, Tssc4, Trpm5, Kcnq1, Cdkn1c, Slc22a18
Downstream geneNap1l4, Cars, Tnfrsf26, Tnfrsf22, Tnfrsf23, Osbpl5, Mrgprg, Mrgpre, Nadsyn1, Dhcr7, Gm498, Shank2, Cttn, Ppfia1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-274F24.bB6Ng01-274F24.g
ACCGA075692GA075693
length1,1931,018
definitionB6Ng01-274F24.b B6Ng01-274F24.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggcccatacataaacatgataaaagcaatctacagcaaacca
atagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccattttctccctaccttttcaacatag
tacttgaaatattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaccagagaactcctaaacc
tgataaacagctttggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagtcacaaataatataaaatatctcggcg
tgactctaactaaggaagtgaaagatctgtatgataaaaacttcaagtct
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggatcaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccatcaaaattccaactcaattcttc
aacaaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
taggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtagaccaatggaatagaattgaaga
cccagaaatgaacccacatacctatggtcacttgatcttcgacaagggag
ctaaaaccatccagtggaagaaagacagcattttcaacaattgggtgctg
ggaacaactggtttgttatcatgtagaagaatgcgaatcgatcatactta
tctccttgtactaaagtcaatctagtgatcagtactttcacataaaccag
agacactgaaacttatagagagaaagtggggaaaagctgaagatattgga
cacaggggaaaatctgaacagaaccagcaatggcctggcttagatcgaga
tggacaaatggacctcatgaaacctgccaaagctttctcgcaa
gaattcactgctggacacacggtatgtgggtgggaggggacaatgagggc
agccaccctagtgaacagagcaacctctcagatgtccaggaggtgctaac
tagtgagtgaactctgagcaatccccgccaccagcagtatcctttcaagc
cacacccaggagcaaaaggtggccaaaccacacccagacctacttcctga
cctggcaaggctctgagccccactggcagatgacagttcattcaaaggca
ctttttttttccttcaagatttatttattatatgtaagtacactgaagct
gtcttcagacacaccagaagagggcatccaatctcactacagatggttgg
ttatgagccaccatgtggttgctggggtttgaactcagggcctctggaag
agcagtcagtgctcttaaccgctgagccatttctccagccctcaaaggca
ctttgaatggttcccgggatgtggagagggaataacaccagataggagac
cctttcactcccacccttccacacattcgccccagcaggaactacacaga
ccacacagttgttaaaaaaagaaaagtgacattgtttatttggaatgaaa
atatggtataaaaaatattaacacggaatggtgggttggaagcaggtaac
caatataaatacggtccaataagttagcgcacccgcacagcggggcaagg
ctcagcaagcacgggaaatatcttcggtgaagagcagcggcggcgtcacc
cggggcatcccctgggctcctgggctcctgtctgatgcggcagcgtgggc
tggttcccggctcactggtcccgtgcgtttctgtagggagagactgagtc
aggagctgcccggtgcagcttttagttctcaaggtgggccgaggcagctc
ctgcatgcgttccagttgctctcgtcaaagggttttcaagacgtaggatc
ccccctccccttcccgtggcttttaaatcagtttttctccttggatgcag
gaccctattcactttcca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_150686892_150687918
seq2: B6Ng01-274F24.g_68_1084

seq1  GAATTCACTGCTGGACACACGGTATGTGGGTGGGAGGGGACAATGAGGGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTGCTGGACACACGGTATGTGGGTGGGAGGGGACAATGAGGGC  50

seq1  AGCCACCCTAGTGAACAGAGCAACCTCTCAGATGTCCAGGAGGTGCTAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCACCCTAGTGAACAGAGCAACCTCTCAGATGTCCAGGAGGTGCTAAC  100

seq1  TAGTGAGTGAACTCTGAGCAATCCCCGCCACCAGCAGTATCCTTTCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGAGTGAACTCTGAGCAATCCCCGCCACCAGCAGTATCCTTTCAAGC  150

seq1  CACACCCAGGAGCAAAAGGTGGCCAAACCACACCCAGACCTACTTCCTGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCCAGGAGCAAAAGGTGGCCAAACCACACCCAGACCTACTTCCTGA  200

seq1  CCTGGCAAGGCTCTGAGCCCCACTGGCAGATGACAGTTCATTCAAAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGCAAGGCTCTGAGCCCCACTGGCAGATGACAGTTCATTCAAAGGCA  250

seq1  CTTTTTTTTTCCTTCAAGATTTATTTATTATATGTAAGTACACTGAAGCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTTTTTTCCTTCAAGATTTATTTATTATATGTAAGTACACTGAAGCT  300

seq1  GTCTTCAGACACACCAGAAGAGGGCATCCAATCTCACTACAGATGGTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTTCAGACACACCAGAAGAGGGCATCCAATCTCACTACAGATGGTTGG  350

seq1  TTATGAGCCACCATGTGGTTGCTGGGGTTTGAACTCAGGGCCTCTGGAAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAGCCACCATGTGGTTGCTGGGGTTTGAACTCAGGGCCTCTGGAAG  400

seq1  AGCAGTCAGTGCTCTTAACCGCTGAGCCATTTCTCCAGCCCTCAAAGGCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGTCAGTGCTCTTAACCGCTGAGCCATTTCTCCAGCCCTCAAAGGCA  450

seq1  CTTTGAATGGTTCCCGGGATGTGGAGAGGGAATAACACCAGATAGGAGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAATGGTTCCCGGGATGTGGAGAGGGAATAACACCAGATAGGAGAC  500

seq1  CCTTTCACTCCCACCCTTCCACACATTCGCCCCAGCAGGAACTACACAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTCACTCCCACCCTTCCACACATTCGCCCCAGCAGGAACTACACAGA  550

seq1  CCACACAGTTGTTAAAAAAAGAAAAGTGACATTGTTTATTTGGAATGAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACAGTTGTTAAAAAAAGAAAAGTGACATTGTTTATTTGGAATGAAA  600

seq1  ATATGGTATAAAAAATATTAACACGGAATGGTGGGTTGGAAGCAGGTAAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGGTATAAAAAATATTAACACGGAATGGTGGGTTGGAAGCAGGTAAC  650

seq1  CAATATAAATACGGTCCAATAAGTTAGCGCACCCGCACAGCGGGGCAAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATATAAATACGGTCCAATAAGTTAGCGCACCCGCACAGCGGGGCAAGG  700

seq1  CTCAGCAAGCACGGG-AATATCTTCGGTGAAGAGCAGCGGCGGCGTCACC  749
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CTCAGCAAGCACGGGAAATATCTTCGGTGAAGAGCAGCGGCGGCGTCACC  750

seq1  CGGGGCATCCCCTGGGCTCCTGGGCTCCTGTCTGATGCGGCAGCGTGGGC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGCATCCCCTGGGCTCCTGGGCTCCTGTCTGATGCGGCAGCGTGGGC  800

seq1  TGGTTCCCGGCTCAACTGGTCCCGTGCGTTTCTGTAGGGAGAAGACTGAG  849
      ||||||||||||| ||||||||||||||||||||||||||| ||||||||
seq2  TGGTTCCCGGCTC-ACTGGTCCCGTGCGTTTCTGTAGGGAG-AGACTGAG  848

seq1  TCAGGAGCTGCCCGGGTGCAGCTTTTAAGTCTCCAGGTGGGCCGA-GCAG  898
      ||||||||||||| |||||||||||||  |||| ||||||||||| ||||
seq2  TCAGGAGCTGCCC-GGTGCAGCTTTTAGTTCTCAAGGTGGGCCGAGGCAG  897

seq1  CTCCTGCCATGCGTTCCAGGTCCCCTCTCCAAAGGGTTTTCAAAGACGTA  948
      |||||| |||||||||||| | | |||  |||||||||||| ||||||||
seq2  CTCCTG-CATGCGTTCCAGTTGCTCTCGTCAAAGGGTTTTC-AAGACGTA  945

seq1  GGATTCCCCCCTCCCCCTCCCCGTGGCTTTTAAAATCGAAGTTTTCCCCA  998
      ||| |||||||| ||||| |||||||||||| |||||  |||||| | | 
seq2  GGA-TCCCCCCT-CCCCTTCCCGTGGCTTTT-AAATC--AGTTTTTCTC-  989

seq1  CTGGGAGGCATGACCCCCATTCACTTTCC  1027
      || ||| ||| || ||| |||||||||||
seq2  CTTGGATGCAGGA-CCCTATTCACTTTCC  1017