BAC Information

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BAC

Clone NameB6Ng01-277P21
Chromosome7 (Build37)
Map Location 61,089,141 - 61,219,821
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100040692, Gm1865, LOC100040718, LOC668789
Downstream geneMrps33p, LOC622146, Luzp2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-277P21.bB6Ng01-277P21.g
ACCGA078359GA078360
length1,181705
definitionB6Ng01-277P21.b B6Ng01-277P21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,218,642 - 61,219,821)(61,089,141 - 61,089,836)
sequence
gaattcccttatgcagagtgtttcatgaaactttttccctttatcaccac
tgtaactgatcatattagaaacctttggtgtgcagggagggctatcttta
ccttagtgacattctgagcatttttaacaaggtatgatgtctctttcttt
catgattaaatctttaagagactttccctgtatcttctctttgagaacct
cacagtgtcaggtaaatgctgcagctaggactacctaataaaattatgac
ctagataactctcaattgcagctgtgctgagctcttcgactatcagttcc
tggcctctggattgtattgctccctaggacttctgatacaagacagggct
ttgttttggctctctgtctcctcagccctcagtggggtggtttgtgctca
gtgagtttgaactcagtgctctcctagttctggaaaagtcatttactctc
aattttcctttgtttctacttgaaagcatgtaagtgacagagcatcagct
tttactatgtgtctagaataagaaattttaactgtcaccttttacgtgaa
aaggagagttcccattcatggacatacttaagctctgatttctgggctat
gtaggcctggtttttagtgtcatctcttataaatacatttccttactcat
cattaactgttagaacattgatcaagtgttatcatagacttatacttgac
aagctcagtgcccctttgtctgtactacatatattttaagaaaattaaaa
ataaatgatttatttttattaaatgtgtttagcttgtatataattgcacc
atatgtgtatagtgctcacaagaaacagtagaagatatcatatcctctgg
aattggtgattgtctgtgagtcaccatgtggttgctagaaattgaataaa
gatcctcttcaggaaaagccagtaggctaaagaccaccaacagactggga
aaggatctttacctatcctaaatcagataggggactgattatccaatata
tataaagactcaagaagtggactccagaaaaccaaataacctcattaaaa
atggggctcagactgaacaaagaatttcttcacttgagaatactgaatgg
cagaagaaaggcacctgagaatgtttcaccatcctttaatctatcagatt
gcaaatcaaacaaccctggaaagttccacct

gaattcaaataacaaagcaagtgatcgttaaaagtcagggaaaaagcaga
tagcaaagggtggcagaagaaagcatgactttcccagggaagtgacagat
gtggcacaaacgaagaagatctcatcaacactgataacaagagatccaga
ccccaaaaggaaaaggagcacaagggactgcacaaagctgaggtgcagct
cttcctccatgtgcctcctggaagtcaggcagaaactgagcaggcaacac
tgtcatttgtccagtgtccagctttacagtcccttcttggaaccttaccc
ttcactgaagccaacacagatgtttgcacttttaccatcatatttcctat
ctctaacttggacttttggtgaaggattgaaaattagcatccagatggta
ctgagggagagagaggaagtgagggaagagagaaagagaagagcagaagg
aagaggaagaggggaaaactgagaaagggaaggagaggaggagagaggaa
gagaagggaagggaggagagaggcaagagggaaaaagaataaaaaaggaa
agaccaatctttggctttcatttaagttacttccttccataatccccaat
tatgtacgtcattggtcttgttaactcccgagaaggttttgtagaacatt
agatcaaagcccaatattttgatttttaagttgagaaccattttttgttt
cttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_61218642_61219821
seq2: B6Ng01-277P21.b_46_1226 (reverse)

seq1  AGGTGGAA--TCTCAGGGTTGTTTTGATTTGCATTTCCCTGAT-GATT-A  46
      ||||||||  |  |||||||| ||||||||||| |   ||||| |||| |
seq2  AGGTGGAACTTTCCAGGGTTG-TTTGATTTGCAAT---CTGATAGATTAA  46

seq1  AGGATGTTGAACATTTTTTCAGGTGC--TTC-TCTGCCATTCAGTATTCC  93
      |||||| |||| |  || ||||||||  ||| |||||||||||||||| |
seq2  AGGATGGTGAA-ACATTCTCAGGTGCCTTTCTTCTGCCATTCAGTATT-C  94

seq1  TCAGGTGA--GAATTCTTTGTTCAGTTCTGAGCCCCATTTTTAATGGGGT  141
      ||| ||||   |||||||||||||| |||||||||||||||||||| |||
seq2  TCAAGTGAAGAAATTCTTTGTTCAG-TCTGAGCCCCATTTTTAATGAGGT  143

seq1  TATTTGGTTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTGGAT  191
      ||||||||||||||||||||| ||||||||| ||||||||||||||||||
seq2  TATTTGGTTTTCTGGAGTCCA-CTTCTTGAG-TCTTTATATATATTGGAT  191

seq1  -ATCAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTG  240
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGTCCCCTATCTGATTTAGGATAGGTAAAGATCCTTTCCCAGTCTG  241

seq1  TTGGTGGTCTTTAGCCTACTGGCTTTTCCTGAAGAGGATCTTTATTCAAT  290
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGTGGTCTTTAGCCTACTGGCTTTTCCTGAAGAGGATCTTTATTCAAT  291

seq1  TTCTAGCAACCACATGGTGACTCACAGACAATCACCAATTCCAGAGGATA  340
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGCAACCACATGGTGACTCACAGACAATCACCAATTCCAGAGGATA  341

seq1  TGATATCTTCTACTGTTTCTTGTGAGCACTATACACATATGGTGCAATTA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATCTTCTACTGTTTCTTGTGAGCACTATACACATATGGTGCAATTA  391

seq1  TATACAAGCTAAACACATTTAATAAAAATAAATCATTTATTTTTAATTTT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAGCTAAACACATTTAATAAAAATAAATCATTTATTTTTAATTTT  441

seq1  CTTAAAATATATGTAGTACAGACAAAGGGGCACTGAGCTTGTCAAGTATA  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAAATATATGTAGTACAGACAAAGGGGCACTGAGCTTGTCAAGTATA  491

seq1  AGTCTATGATAACACTTGATCAATGTTCTAACAGTTAATGATGAGTAAGG  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGATAACACTTGATCAATGTTCTAACAGTTAATGATGAGTAAGG  541

seq1  AAATGTATTTATAAGAGATGACACTAAAAACCAGGCCTACATAGCCCAGA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATTTATAAGAGATGACACTAAAAACCAGGCCTACATAGCCCAGA  591

seq1  AATCAGAGCTTAAGTATGTCCATGAATGGGAACTCTCCTTTTCACGTAAA  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGCTTAAGTATGTCCATGAATGGGAACTCTCCTTTTCACGTAAA  641

seq1  AGGTGACAGTTAAAATTTCTTATTCTAGACACATAGTAAAAGCTGATGCT  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGACAGTTAAAATTTCTTATTCTAGACACATAGTAAAAGCTGATGCT  691

seq1  CTGTCACTTACATGCTTTCAAGTAGAAACAAAGGAAAATTGAGAGTAAAT  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCACTTACATGCTTTCAAGTAGAAACAAAGGAAAATTGAGAGTAAAT  741

seq1  GACTTTTCCAGAACTAGGAGAGCACTGAGTTCAAACTCACTGAGCACAAA  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTTTCCAGAACTAGGAGAGCACTGAGTTCAAACTCACTGAGCACAAA  791

seq1  CCACCCCACTGAGGGCTGAGGAGACAGAGAGCCAAAACAAAGCCCTGTCT  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACTGAGGGCTGAGGAGACAGAGAGCCAAAACAAAGCCCTGTCT  841

seq1  TGTATCAGAAGTCCTAGGGAGCAATACAATCCAGAGGCCAGGAACTGATA  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATCAGAAGTCCTAGGGAGCAATACAATCCAGAGGCCAGGAACTGATA  891

seq1  GTCGAAGAGCTCAGCACAGCTGCAATTGAGAGTTATCTAGGTCATAATTT  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGAAGAGCTCAGCACAGCTGCAATTGAGAGTTATCTAGGTCATAATTT  941

seq1  TATTAGGTAGTCCTAGCTGCAGCATTTACCTGACACTGTGAGGTTCTCAA  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGGTAGTCCTAGCTGCAGCATTTACCTGACACTGTGAGGTTCTCAA  991

seq1  AGAGAAGATACAGGGAAAGTCTCTTAAAGATTTAATCATGAAAGAAAGAG  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAGATACAGGGAAAGTCTCTTAAAGATTTAATCATGAAAGAAAGAG  1041

seq1  ACATCATACCTTGTTAAAAATGCTCAGAATGTCACTAAGGTAAAGATAGC  1090
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCATACCTTGTTAAAAATGCTCAGAATGTCACTAAGGTAAAGATAGC  1091

seq1  CCTCCCTGCACACCAAAGGTTTCTAATATGATCAGTTACAGTGGTGATAA  1140
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCCTGCACACCAAAGGTTTCTAATATGATCAGTTACAGTGGTGATAA  1141

seq1  AGGGAAAAAGTTTCATGAAACACTCTGCATAAGGGAATTC  1180
      ||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAAGTTTCATGAAACACTCTGCATAAGGGAATTC  1181


seq1: chr7_61089141_61089836
seq2: B6Ng01-277P21.g_65_768

seq1  GAATTCAAATAACAAAGCAAGTGATCGTTAAAAGTCAGGGAAAAAGCAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATAACAAAGCAAGTGATCGTTAAAAGTCAGGGAAAAAGCAGA  50

seq1  TAGCAAAGGGTGGCAGAAGAAAGCATGACTTTCCCAGGGAAGTGACAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAAAGGGTGGCAGAAGAAAGCATGACTTTCCCAGGGAAGTGACAGAT  100

seq1  GTGGCACAAACGAAGAAGATCTCATCAACACTGATAACAAGAGATCCAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCACAAACGAAGAAGATCTCATCAACACTGATAACAAGAGATCCAGA  150

seq1  CCCCAAAAGGAAAAGGAGCACAAGGGACTGCACAAAGCTGAGGTGCAGCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAAAGGAAAAGGAGCACAAGGGACTGCACAAAGCTGAGGTGCAGCT  200

seq1  CTTCCTCCATGTGCCTCCTGGAAGTCAGGCAGAAACTGAGCAGGCAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTCCATGTGCCTCCTGGAAGTCAGGCAGAAACTGAGCAGGCAACAC  250

seq1  TGTCATTTGTCCAGTGTCCAGCTTTACAGTCCCTTCTTGGAACCTTACCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCATTTGTCCAGTGTCCAGCTTTACAGTCCCTTCTTGGAACCTTACCC  300

seq1  TTCACTGAAGCCAACACAGATGTTTGCACTTTTACCATCATATTTCCTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTGAAGCCAACACAGATGTTTGCACTTTTACCATCATATTTCCTAT  350

seq1  CTCTAACTTGGACTTTTGGTGAAGGATTGAAAATTAGCATCCAGATGGTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTAACTTGGACTTTTGGTGAAGGATTGAAAATTAGCATCCAGATGGTA  400

seq1  CTGAGGGAGAGAGAGGAAGTGAGGGAAGAGAGAAAGAGAAGAGCAGAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGGAGAGAGAGGAAGTGAGGGAAGAGAGAAAGAGAAGAGCAGAAGG  450

seq1  AAGAGGAAGAGGGGAAAACTGAGAAAGGGAAGGAGAGGAGGAGAGAGGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGAGGGGAAAACTGAGAAAGGGAAGGAGAGGAGGAGAGAGGAA  500

seq1  GAGAAGGGAAGGGAGGAGAGAGGCAAGAGGGAAAAAGAAT-AAAAAGGAA  549
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  GAGAAGGGAAGGGAGGAGAGAGGCAAGAGGGAAAAAGAATAAAAAAGGAA  550

seq1  AGACCAATCTTTGGCTTTCATTTAAGTTACTTCC-TCCATAATCCCCAAT  598
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGACCAATCTTTGGCTTTCATTTAAGTTACTTCCTTCCATAATCCCCAAT  600

seq1  TATGTATGTCATTGGTCTTGTTAACTCCTGAGAGGGTTTTGTAG-ACATT  647
      |||||| ||||||||||||||||||||| |||| |||||||||| |||||
seq2  TATGTACGTCATTGGTCTTGTTAACTCCCGAGAAGGTTTTGTAGAACATT  650

seq1  TGAGCAAAGCCAAATA-TTTGA-TTTTAAGTTG-GAACAA--TTTTAGTT  692
       || ||||||| |||| ||||| |||||||||| |||| |  ||||  ||
seq2  AGATCAAAGCCCAATATTTTGATTTTTAAGTTGAGAACCATTTTTTGTTT  700

seq1  CTTC  696
      ||||
seq2  CTTC  704


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