BAC Information

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BAC

Clone NameB6Ng01-278E15
Chromosome7 (Build37)
Map Location 95,858,741 - 95,859,610
singlet/doubletsinglet
Overlap genenone
Upstream geneGrm5, Ctsc, LOC100039756, Rab38, LOC100039924, LOC666598
Downstream geneEG621562, Tmem135, LOC100039969, Fzd4, Prss23, LOC100040001, Me3
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-278E15.bB6Ng01-278E15.g
ACCGA078575GA078576
length1,178871
definitionB6Ng01-278E15.b B6Ng01-278E15.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcttacgtttacctttcgtcatctggcaatctctggagttagttgt
tatacttgtctttgtttagagattgttcctgtgttgcttttgttaccctc
tatcagcagacgtgggaggctagctctctcctctgattatcagtggtcag
agcagtctctgcaggcaagctctcctctttcagggaaggtgcacagttat
ctggtgtttggacctcctcctggctgaagatgaaggcccaaaacaggatc
tttcccagaagctgtgttgctttggtcaggaaggtggccggttgtctgga
accgaaggtggcgtcacctcagaagctctgtggctctcaccaggaaggtg
gccggttgtctggagccgaagatggcgccgcctcagaagctctctggttc
tcgccaggaaggtggccggttgtctggagccgaagattgcgccacctcag
aagctctctggctctcgcctttcccagaaacggctggcctctgtattcca
cactgtcacccgtgcagcctgccctccgtggagtcctggagccaaggaga
ctcccactgccagggcctgaggcacaaacctcttgggctggcggatccct
gtgcactcaccaggaaggtagccggttgtctggagctgaagatggcgcca
cctcctcttttttttattagatatcttaaatttacatttcaaatgttatc
cctgtcttagtcagggttcctatgcctggacaaaatatcatgaccaagaa
acaagttggggaggaaagggtttattcagcttacacttccacattgctgt
tcatcatcaagaaagtcaggactggaactcaagcagtcagaagaagaagc
tgatgcagaaaacatggagggatgtaacttactggcttgcttccctggct
gctcagcctgctctctatagagccaagactacagaccagagatgtcagca
ctacagggagctccccccctgatccactattgagaaaatgctgcactgat
ctcatgaggcatttccccactgatgcactttctcttgtgataatcagctg
gtcagttgacacaaaataagcaggtacatccctttctagtcatctggaga
ccgtatccatctcctccctgctacacaacatccatctggcgtgattctta
cttggacatgaaatctctcaccagtagt
gaattcattttaggaaaaattcctgttattaatatgctttttctgttatt
attagacatatataacaatcactaagtaatagcacacccctttagagcag
atctctgcaggtccatgaagatgtactgtcttatagcgatgctatataga
caaaagatggcttaaatcttaatgataatcctataagaattcctaaaatt
atatctgtaattattaagctcttttatagtggaactgctactaggtcctt
ttctgatagtcaaaactgcaatgaaaactctgccagtctcccatgtgtca
ccagttaattgctcttagatagtaaccagactctttttttttttaaattt
ttttcatgtgaatctccccccacccttttttattggttatcttatttatt
tacatttcaaatgttttcccctttccaggtctccactttggaaaccccca
gcccatcccctctccccctgcctctatgagagtgctcccactcctgcctt
cttgccacttttagggatatgctcaaaagatgctccaccatggcataaga
gcacatgcttcactatgttcatagcagtcttatttgtgatagccaggagc
ttgatacaccccagatgttgtacaatggaagaatggatacaaatgtatca
tttacacatggaatactattcagctattatgaaagaggacattctgagtt
ttacaggcaaatggatggaaccagaaaatatcatcctaaaggtaacccag
accctaaaggacatgcatggtatgtatacttactagtaagtggatattag
gggggaaaagtaccgaattcccaggatactatccacagaactcaagatgg
ttaacaagccaaagggcccaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr7_95858741_95859610
seq2: B6Ng01-278E15.g_64_934

seq1  GAATTCATTTTAGGAAAAATTCCTGTTATTAATATGCTTTTTCTGTTATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTTAGGAAAAATTCCTGTTATTAATATGCTTTTTCTGTTATT  50

seq1  ATTAGACATATATAACAATCACTAAGTAATAGCACACCCCTTTAGAGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGACATATATAACAATCACTAAGTAATAGCACACCCCTTTAGAGCAG  100

seq1  ATCTCTGCAGGTCCATGAAGATGTACTGTCTTATAGCGATGCTATATAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCTGCAGGTCCATGAAGATGTACTGTCTTATAGCGATGCTATATAGA  150

seq1  CAAAAGATGGCTTAAATCTTAATGATAATCCTATAAGAATTCCTAAAATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGATGGCTTAAATCTTAATGATAATCCTATAAGAATTCCTAAAATT  200

seq1  ATATCTGTAATTATTAAGCTCTTTTATAGTGGAACTGCTACTAGGTCCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTGTAATTATTAAGCTCTTTTATAGTGGAACTGCTACTAGGTCCTT  250

seq1  TTCTGATAGTCAAAACTGCAATGAAAACTCTGCCAGTCTCCCATGTGTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGATAGTCAAAACTGCAATGAAAACTCTGCCAGTCTCCCATGTGTCA  300

seq1  CCAGTTAATTGCTCTTAGATAGTAACCAGACTCTTTTTTTTTTTAAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTTAATTGCTCTTAGATAGTAACCAGACTCTTTTTTTTTTTAAATTT  350

seq1  TTTTCATGTGAATCTCCCCCCACCCTTTTTTATTGGTTATCTTATTTATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCATGTGAATCTCCCCCCACCCTTTTTTATTGGTTATCTTATTTATT  400

seq1  TACATTTCAAATGTTTTCCCCTTTCCAGGTCTCCACTTTGGAAACCCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATTTCAAATGTTTTCCCCTTTCCAGGTCTCCACTTTGGAAACCCCCA  450

seq1  GCCCATCCCCTCTCCCCCTGCCTCTATGAGAGTGCTCCCACTCCTGCCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATCCCCTCTCCCCCTGCCTCTATGAGAGTGCTCCCACTCCTGCCTT  500

seq1  CTTGCCACTTTTAGGGATATGCTCAAAAGATGCTCCACCATGGCATAAGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGCCACTTTTAGGGATATGCTCAAAAGATGCTCCACCATGGCATAAGA  550

seq1  GCACATGCTTCACTATGTTCATAGCAGTCTTATTTGTGATAGCCAGGAGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACATGCTTCACTATGTTCATAGCAGTCTTATTTGTGATAGCCAGGAGC  600

seq1  TTGATACACCCCAGATGTTGTACAATGGAAGAATGGATACAAATGTATCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATACACCCCAGATGTTGTACAATGGAAGAATGGATACAAATGTATCA  650

seq1  TTTACACATGGAATACTATTCAGCTATTATGAAAGAGGACATTCTGAGTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACACATGGAATACTATTCAGCTATTATGAAAGAGGACATTCTGAGTT  700

seq1  TTACAGGCAAATGGATGGAACCAGAAAATATCATCCT-AAGGTAACCCAG  749
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  TTACAGGCAAATGGATGGAACCAGAAAATATCATCCTAAAGGTAACCCAG  750

seq1  ACCCTAAAGGACATGCATGGTATGTATACTTACTAGTAAGTGGATATTAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTAAAGGACATGCATGGTATGTATACTTACTAGTAAGTGGATATTAG  800

seq1  GGGGGAAAAGTACCGAATTCCCAGGATACTATCCACAGAACTCAAGATGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGAAAAGTACCGAATTCCCAGGATACTATCCACAGAACTCAAGATGG  850

seq1  TTAACAAGCCAAAGGGCCCAA  870
      |||||||||||||||||||||
seq2  TTAACAAGCCAAAGGGCCCAA  871